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Results for MligTC455_29672

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29672 2338 48.70 Mlig455_038550, Mlig455_052206

Neo: -

Age: Down-Up-Up

Mlig455_038550 {REF} {Length: 2629} {RNA1509_32724, RNA1509_49539, RNA1509_7907} {RNA1310_16404, RNA1509_32724, RNA1509_49539, RNA1509_7907} {RNA1509_32724, RNA1509_49539, RNA1509_7907, RNA815_10801}

Mlig455_052206 {REF} {Length: 1979} {RNA1509_32724, RNA1509_43589} {RNA1310_16404, RNA1509_43589} {RNA1509_43589, RNA815_10801}

Cumulative graph for MligTC455_29672

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.318 5.774 0.59528 1.00000
RegionR2 0.107 5.774 0.72105 1.00000
RegionR3 -0.112 5.774 0.65876 1.00000
RegionR4 -0.039 5.774 0.89687 1.00000
RegionR5 -0.436 5.774 0.07736 0.25569
RegionR6 -0.091 5.774 0.71889 1.00000
RegionR7 0.299 5.774 0.28703 0.92110
RegionR8 0.59 5.774 0.06593 0.49516

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.045 5.774 0.26256 0.96879
RegenerationR2 -0.224 5.774 0.42857 0.83313
RegenerationR3 -0.372 5.774 0.22990 0.66463
RegenerationR4 -0.455 5.774 0.15096 0.57924
RegenerationR5 -0.85 5.774 0.00625 0.14420
RegenerationR6 -1.246 5.774 0.00018 0.01250
RegenerationBL -0.974 5.774 0.00338 0.05061
RegenerationTP -0.661 5.774 0.05212 0.37370


Genes with expression patterns similar to MligTC455_29672

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29672 2338 48.7 Mlig455_038550, Mlig455_052206

Neo: -

Age: Down-Up-Up

 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_038550 {REF} {Length: 2629} {RNA1509_32724, RNA1509_49539, RNA1509_7907} {RNA1310_16404, RNA1509_32724, RNA1509_49539, RNA1509_7907} {RNA1509_32724, RNA1509_49539, RNA1509_7907, RNA815_10801}

Mlig455_052206 {REF} {Length: 1979} {RNA1509_32724, RNA1509_43589} {RNA1310_16404, RNA1509_43589} {RNA1509_43589, RNA815_10801}
2. MligTC455_47415 204 4.25 Mlig455_065682

Neo: Int S/G2/M

Age: -

 2.663 - - 0.811 - 0.955 0.897 Mlig455_065682 {REF} {Length: 697} {NoTransDecoderORF} {RNA1509_49419} {RNA1310_93693} {RNA815_1595}
3. MligTC455_47414 197 4.09 Mlig455_039028

Neo: -

Age: logFC(26M/2M)=-0.558

 2.643 - - 0.828 - 0.957 0.858 Mlig455_039028 {REF} {Length: 2399} {Pfam: Integrase core domain [PF00665.28, score=45.7]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=4e-11]} {RNA1509_33291} {RNA1310_1940.1} {RNA815_1595}
4. MligTC455_47412 245 5.11 Mlig455_025659

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-1.406

 RTL1 2.633 - - 0.816 - 0.952 0.865 Mlig455_025659 {REF} {Length: 3817} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=62.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]; Integrase core domain [PF00665.28, score=43.8]; Zinc knuckle [PF00098.25, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=91.7, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=3e-82]} {RNA1509_33291} {RNA1310_923.1} {RNA815_1595}
5. MligTC455_49365 148 3.08 Mlig455_017917

Neo: -

Age: logFC(26M/2M)=-0.372

 1.824 - - - 0.863 0.961 - Mlig455_017917 {REF} {Length: 1359} {RNA1310_37310.3} {RNA815_21947}
6. MligTC455_40403 9540 198.75 Mlig455_012883

Neo: -

Age: -

 1.8 - - 0.836 - 0.964 - Mlig455_012883 {REF} {Length: 2696} {RNA1509_3465, RNA1509_49920, RNA1509_5573} {RNA1310_95894.2, RNA1509_3465, RNA1509_49920, RNA1509_5573} {RNA1509_3465, RNA1509_49920, RNA1509_5573, RNA815_48924}
7. MligTC455_50937 13872 289 Mlig455_002623

Neo: -

Age: logFC(26M/2M)=-0.326

Regeneration-downregulated R6: -1.088

Regeneration-depleted R6: -1.088

 1.772 - - 0.809 - 0.963 - Mlig455_002623 {REF} {Length: 868} {TRANSSPLICED} {Pfam: Dynein light chain type 1 [PF01221.20, score=55.1]; EF hand [PF00036.34, score=40.9]; EF-hand domain [PF13405.8, score=30.7]; EF-hand domain pair [PF13499.8, score=29.7]; EF hand [PF13202.8, score=26.4]} {Smed: dd_Smed_v6_16347_0_1, dd_Smed_v6_16347_0_1, [RH, Score=123, Expect=4e-36]} {RNA1509_12924, RNA1509_1318} {RNA1310_17292, RNA1509_12924, RNA1509_1318} {RNA1509_12924, RNA1509_1318, RNA815_19041}
8. MligTC455_09277 21 0.44 Mlig455_048345

Neo: -

Age: -

Regeneration-upregulated R2: 6.135

Regeneration-enriched R2: 6.135

 1.759 - - - - 0.956 0.803 Mlig455_048345 {REF} {Length: 1499} {Pfam: Gp5 C-terminal repeat (3 copies) [PF06715.14, score=19.5]} {RNA1310_58579}
9. MligTC455_39547 494 10.29 Mlig455_044819

Neo: -

Age: -

 PDE6D 0.973 - - - - 0.973 - Mlig455_044819 {REF} {Length: 1916} {TRANSSPLICED} {Pfam: GMP-PDE, delta subunit [PF05351.13, score=151.3]} {Human: ENSG00000156973, PDE6D, phosphodiesterase 6D, [RH, Score=244, Expect=5e-84]} {Mouse: ENSMUSG00000026239, Pde6d, phosphodiesterase 6D, cGMP-specific, rod, delta, [RH, Score=244, Expect=2e-84]} {Dmel: FBgn0032059, PrBP, Prenyl-binding protein, [RH, Score=191, Expect=3e-63]} {Celegans: WBGene00003966, pdl-1, Phosphodiesterase delta-like protein, [RH, Score=220, Expect=9e-75]} {Smed: dd_Smed_v6_9168_0_4, dd_Smed_v6_9168_0_4, [RH, Score=232, Expect=5e-80]} {RNA1509_4210} {RNA1310_21694} {RNA815_8937}
10. MligTC455_20687 1436 29.92 Mlig455_002996

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=0.587

 TMEM145 0.968 - - - - - 0.968 Mlig455_002996 {REF} {Length: 3881} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=160.9]} {Human: ENSG00000167619, TMEM145, transmembrane protein 145, [RH, Score=243, Expect=1e-72]} {Mouse: ENSMUSG00000043843, Tmem145, transmembrane protein 145, [RH, Score=279, Expect=1e-85]} {Dmel: FBgn0034674, CG9304, [Score=67.0, Expect=3e-11]} {Celegans: WBGene00007595, C15A7.2, [Score=202, Expect=2e-57]} {RNA1509_56975} {RNA1310_10889.1} {RNA815_2731}
11. MligTC455_36824 13 0.27 Mlig455_013106

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=1.555

 HSPB6 0.968 - - - - 0.968 - Mlig455_013106 {REF} {Length: 4507} {Pfam: Hsp20/alpha crystallin family [PF00011.23, score=48.8]} {Human: ENSG00000004776, HSPB6, heat shock protein family B (small) member 6, [RH, Score=55.1, Expect=4e-08]} {Mouse: ENSMUSG00000036854, Hspb6, heat shock protein, alpha-crystallin-related, B6, [RH, Score=58.2, Expect=2e-09]} {Dmel: FBgn0261649, tinc, tincar, [RH, Score=98.6, Expect=2e-20]} {Smed: dd_Smed_v6_11374_0_1, dd_Smed_v6_11374_0_1, [Score=134, Expect=6e-32]} {RNA1509_42227} {RNA1310_6823.1} {RNA815_9589}
12. MligTC455_44624 5094 106.13 Mlig455_057087

Neo: -

Age: logFC(26M/2M)=-0.347

 C1orf158 0.96 - - - - 0.960 - Mlig455_057087 {REF} {Length: 1117} {Human: ENSG00000157330, C1orf158, chromosome 1 open reading frame 158, [RH, Score=92.0, Expect=8e-23]} {Mouse: ENSMUSG00000028589, 1700012P22Rik, RIKEN cDNA 1700012P22 gene, [RH, Score=92.4, Expect=5e-23]} {Smed: dd_Smed_v6_6127_0_1, dd_Smed_v6_6127_0_1, [RH, Score=141, Expect=1e-42]} {RNA1509_23671, RNA1509_5886} {RNA1310_35499.1, RNA1509_23671, RNA1509_5886} {RNA1509_23671, RNA1509_5886, RNA815_44.1}
13. MligTC455_34310 401 8.35 Mlig455_000438, Mlig455_000499, Mlig455_024843

Neo: -

Age: -

 0.955 - - - - 0.955 -

Mlig455_000438 {REF} {Length: 4036} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=56.9]; PDZ domain [PF17820.3, score=22.9]; PDZ domain [PF00595.26, score=19.3]} {Dmel: FBgn0031745, rau, [Score=66.2, Expect=4e-11]} {RNA1509_58805} {RNA1310_4556} {RNA815_18406.1}

Mlig455_000499 {REF} {Length: 4148} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=56.9]; PDZ domain [PF17820.3, score=22.9]; PDZ domain [PF00595.26, score=19.3]} {Dmel: FBgn0031745, rau, [Score=66.2, Expect=4e-11]} {RNA1509_58805} {RNA1310_4556} {RNA815_18406.1}

Mlig455_024843 {REF} {Length: 4469} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=29.1]} {RNA1509_39255} {RNA1310_4556} {RNA815_18406.1}
14. MligTC455_38333 15 0.32 Mlig455_007797

Neo: -

Age: -

 0.955 - - - - 0.955 - Mlig455_007797 {REF} {Length: 1046} {NoTransDecoderORF} {RNA1509_42521} {RNA1310_8821} {RNA815_16672}

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