TomoSeq data search

Data search

Results for MligTC455_34310

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_34310

401

8.35

Mlig455_000438, Mlig455_000499, Mlig455_024843

Neo: -

Age: -

Mlig455_000438 {REF} {Length: 4036} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=56.9]; PDZ domain [PF17820.3, score=22.9]; PDZ domain [PF00595.26, score=19.3]} {Dmel: FBgn0031745, rau, [Score=66.2, Expect=4e-11]} {RNA1509_58805} {RNA1310_4556} {RNA815_18406.1}

Mlig455_000499 {REF} {Length: 4148} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=56.9]; PDZ domain [PF17820.3, score=22.9]; PDZ domain [PF00595.26, score=19.3]} {Dmel: FBgn0031745, rau, [Score=66.2, Expect=4e-11]} {RNA1509_58805} {RNA1310_4556} {RNA815_18406.1}

Mlig455_024843 {REF} {Length: 4469} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=29.1]} {RNA1509_39255} {RNA1310_4556} {RNA815_18406.1}

Cumulative graph for MligTC455_34310

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.002	3.483	0.25269	0.90009
RegionR2	2.55	3.483	0.00364	0.05215
RegionR3	0.27	3.483	0.69377	1.00000
RegionR4	-1.127	3.483	0.17319	0.43820
RegionR5	-0.664	3.483	0.31879	0.65985
RegionR6	0.236	3.483	0.74838	1.00000
RegionR7	0.109	3.483	0.89144	1.00000
RegionR8	0.627	3.483	0.48042	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	2.256	3.483	0.35292	1.00000
RegenerationR2	-0.135	3.483	0.86781	1.00000
RegenerationR3	1.069	3.483	0.21958	0.65609
RegenerationR4	1.243	3.483	0.15482	0.58526
RegenerationR5	1.116	3.483	0.19522	0.62678
RegenerationR6	-0.467	3.483	0.60626	0.87188
RegenerationBL	1.057	3.483	0.20665	0.54894
RegenerationTP	-1.743	3.483	0.15280	0.57841

Genes with expression patterns similar to MligTC455_34310

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_34310	401	8.35	Mlig455_000438, Mlig455_000499, Mlig455_024843	Neo: - Age: -		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000438 {REF} {Length: 4036} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=56.9]; PDZ domain [PF17820.3, score=22.9]; PDZ domain [PF00595.26, score=19.3]} {Dmel: FBgn0031745, rau, [Score=66.2, Expect=4e-11]} {RNA1509_58805} {RNA1310_4556} {RNA815_18406.1} Mlig455_000499 {REF} {Length: 4148} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=56.9]; PDZ domain [PF17820.3, score=22.9]; PDZ domain [PF00595.26, score=19.3]} {Dmel: FBgn0031745, rau, [Score=66.2, Expect=4e-11]} {RNA1509_58805} {RNA1310_4556} {RNA815_18406.1} Mlig455_024843 {REF} {Length: 4469} {Pfam: Ras association (RalGDS/AF-6) domain [PF00788.25, score=29.1]} {RNA1509_39255} {RNA1310_4556} {RNA815_18406.1}
2.	MligTC455_20377	7938	165.38	Mlig455_050417	Neo: - Age: -	SDHB	1.742	-	-	0.790	-	0.952	-	Mlig455_050417 {REF} {Length: 1306} {TRANSSPLICED} {Pfam: 2Fe-2S iron-sulfur cluster binding domain [PF13085.8, score=115.5]; 4Fe-4S dicluster domain [PF13534.8, score=39.2]; 4Fe-4S dicluster domain [PF13183.8, score=34.9]; 4Fe-4S dicluster domain [PF13237.8, score=33.0]} {Human: ENSG00000117118, SDHB, succinate dehydrogenase complex iron sulfur subunit B, [RH, Score=402, Expect=2e-142]} {Mouse: ENSMUSG00000009863, Sdhb, succinate dehydrogenase complex, subunit B, iron sulfur (Ip), [RH, Score=393, Expect=1e-138]} {Dmel: FBgn0014028, SdhB, Succinate dehydrogenase, subunit B (iron-sulfur), [RH, Score=380, Expect=1e-133]} {Celegans: WBGene00006433, sdhb-1, Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial, [RH, Score=363, Expect=4e-127]} {Smed: dd_Smed_v6_925_0_1, dd_Smed_v6_925_0_1, [RH, Score=415, Expect=7e-148]} {RNA1509_11121, RNA1509_11590, RNA1509_13399, RNA1509_1451, RNA1509_15997, RNA1509_28115, RNA1509_37520, RNA1509_56242} {RNA1310_16280.1, RNA1509_11121, RNA1509_11590, RNA1509_13399, RNA1509_1451, RNA1509_15997, RNA1509_28115, RNA1509_37520, RNA1509_56242} {RNA1509_11121, RNA1509_11590, RNA1509_13399, RNA1509_1451, RNA1509_15997, RNA1509_28115, RNA1509_37520, RNA1509_56242, RNA815_8827}
3.	MligTC455_54208	180	3.74	Mlig455_005027	Neo: - Age: logFC(26M/2M)=-0.885	LRRC74A	1.668	-	-	0.958	-	0.710	-	Mlig455_005027 {REF} {Length: 4429} {Pfam: Leucine Rich repeat [PF13516.8, score=95.8]; Leucine Rich Repeat [PF00560.35, score=29.1]; Leucine Rich repeats (2 copies) [PF12799.9, score=19.6]} {Human: ENSG00000100565, LRRC74A, leucine rich repeat containing 74A, [Score=187, Expect=9e-52]} {Mouse: ENSMUSG00000059114, Lrrc74a, leucine rich repeat containing 74A, [Score=182, Expect=2e-50]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=80.1, Expect=2e-15]} {Smed: dd_Smed_v6_14506_0_1, dd_Smed_v6_14506_0_1, [RH, Score=370, Expect=6e-121]} {RNA1509_24088} {RNA1310_10119} {RNA815_985}
4.	MligTC455_36603	6393	133.19	Mlig455_056234	Neo: - Age: Down-Up-Up	ENKUR	1.661	-	-	0.709	-	0.952	-	Mlig455_056234 {REF} {Length: 3195} {Pfam: Calmodulin-binding [PF13864.8, score=104.0]} {Human: ENSG00000151023, ENKUR, enkurin, TRPC channel interacting protein, [RH, Score=254, Expect=6e-85]} {Mouse: ENSMUSG00000026679, Enkur, enkurin, TRPC channel interacting protein, [RH, Score=246, Expect=1e-81]} {Dmel: FBgn0062517, CG16984, [RH, Score=85.9, Expect=2e-19]} {Smed: dd_Smed_v6_2868_0_1, dd_Smed_v6_2868_0_1, [RH, Score=287, Expect=2e-98]} {RNA1509_2514} {RNA1310_24045.1} {RNA815_10197}
5.	MligTC455_41781	95	1.98	Mlig455_019136	Neo: - Age: -		0.977	-	-	0.977	-	-	-	Mlig455_019136 {REF} {Length: 2805} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=20.6]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=18.6]} {Smed: dd_Smed_v6_21110_0_1, dd_Smed_v6_21110_0_1, [RH, Score=213, Expect=5e-65]} {RNA1310_68226} {RNA815_47910}
6.	MligTC455_47691	103	2.14	Mlig455_046561	Neo: - Age: -	UBTD2	0.972	-	-	0.972	-	-	-	Mlig455_046561 {REF} {Length: 3785} {Pfam: Ubiquitin-binding domain [PF16455.7, score=121.7]; Ubiquitin family [PF00240.25, score=33.5]} {Human: ENSG00000168246, UBTD2, ubiquitin domain containing 2, [RH, Score=218, Expect=9e-71]} {Mouse: ENSMUSG00000044949, Ubtd2, ubiquitin domain containing 2, [RH, Score=219, Expect=2e-71]} {Dmel: FBgn0264712, CG1172, [RH, Score=194, Expect=2e-61]} {Smed: dd_Smed_v6_3009_0_1, dd_Smed_v6_3009_0_1, [RH, Score=198, Expect=4e-63]} {RNA1509_42408} {RNA1310_33971} {RNA815_34971}
7.	MligTC455_27289	174	3.62	Mlig455_032072	Neo: - Age: -	PRKCA	0.968	-	-	0.968	-	-	-	Mlig455_032072 {REF} {Length: 2236} {Pfam: Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=117.5]; C2 domain [PF00168.32, score=104.8]; Protein kinase domain [PF00069.27, score=56.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=31.7]; C1 domain [PF03107.18, score=23.8]} {Human: ENSG00000154229, PRKCA, protein kinase C alpha, [Score=623, Expect=0.0]; ENSG00000166501, PRKCB, protein kinase C beta, [Score=622, Expect=0.0]} {Mouse: ENSMUSG00000050965, Prkca, protein kinase C, alpha, [Score=625, Expect=0.0]; ENSMUSG00000052889, Prkcb, protein kinase C, beta, [Score=621, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [Score=605, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [Score=598, Expect=0.0]} {Smed: dd_Smed_v6_4244_0_1, dd_Smed_v6_4244_0_1, [Score=669, Expect=0.0]} {RNA1509_31401} {RNA1310_40887} {RNA815_7477.1}
8.	MligTC455_33815	198	4.12	Mlig455_022796	Neo: - Age: -		0.966	-	-	0.966	-	-	-	Mlig455_022796 {REF} {Length: 2958} {TRANSSPLICED} {Pfam: THAP domain [PF05485.14, score=42.8]} {RNA1509_16121} {RNA1310_21438, RNA1509_16121} {RNA1509_16121, RNA815_8890.1}
9.	MligTC455_37359	688	14.34	Mlig455_029540	Neo: - Age: Down-Up-Down, logFC(26M/2M)=1.074	CFAP52	0.961	-	-	-	-	0.961	-	Mlig455_029540 {REF} {Length: 2517} {Pfam: WD domain, G-beta repeat [PF00400.34, score=123.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=42.1]; WD40-like domain [PF17005.7, score=27.1]} {Human: ENSG00000166596, CFAP52, cilia and flagella associated protein 52, [RH, Score=750, Expect=0.0]} {Mouse: ENSMUSG00000020904, Cfap52, cilia and flagella associated protein 52, [RH, Score=757, Expect=0.0]} {Dmel: FBgn0035724, CG10064, [RH, Score=441, Expect=1e-145]} {Celegans: WBGene00004895, smu-1, SMU-1; Suppressor of Mec and Unc defects, [Score=60.5, Expect=2e-09]} {Smed: dd_Smed_v6_2585_0_1, dd_Smed_v6_2585_0_1, [RH, Score=841, Expect=0.0]} {RNA1509_1341} {RNA1310_8859} {RNA815_2855}
10.	MligTC455_39153	43	0.9	Mlig455_041661	Neo: - Age: -		0.961	-	-	0.961	-	-	-	Mlig455_041661 {REF} {Length: 1670} {RNA1509_56316} {RNA1310_3607.1, RNA1509_56316} {RNA1509_56316, RNA815_31436}
11.	MligTC455_07755	197	4.11	Mlig455_038727	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.657	ANKRD6	0.955	-	-	0.955	-	-	-	Mlig455_038727 {REF} {Length: 5506} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=158.2]; Ankyrin repeats (many copies) [PF13637.8, score=101.5]; Ankyrin repeat [PF00023.32, score=100.3]; Ankyrin repeats (many copies) [PF13857.8, score=93.9]; Ankyrin repeat [PF13606.8, score=92.0]} {Human: ENSG00000135299, ANKRD6, ankyrin repeat domain 6, [Score=171, Expect=2e-44]} {Mouse: ENSMUSG00000040183, Ankrd6, ankyrin repeat domain 6, [Score=178, Expect=5e-47]} {Dmel: FBgn0086898, dgo, diego, [Score=160, Expect=2e-40]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_10764_0_3, dd_Smed_v6_10764_0_3, [Score=222, Expect=3e-63]} {RNA1509_29314} {RNA1310_7295} {RNA815_14899}
12.	MligTC455_28111	790	16.45	Mlig455_002387, Mlig455_009539, Mlig455_038667, Mlig455_051333, Mlig455_056392, Mlig455_070777	Neo: - Age: -		0.955	-	-	0.955	-	-	-	Mlig455_002387 {REF} {Length: 1959} {NoTransDecoderORF} {RNA1509_35798} {RNA1310_15891} {RNA815_15623} Mlig455_009539 {REF} {Length: 900} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_14078} {RNA815_15623} Mlig455_038667 {REF} {Length: 1938} {NoTransDecoderORF} {RNA1509_57004} {RNA1310_15891} {RNA815_15623} Mlig455_051333 {REF} {Length: 2762} {NoTransDecoderORF} {RNA1509_32637} {RNA1310_13614.1} {RNA815_15623} Mlig455_056392 {REF} {Length: 356} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_108088} {RNA815_16870} Mlig455_070777 {REF} {Length: 237} {NoTransDecoderORF} {RNA1509_58039} {RNA1310_108088} {RNA815_16870}
13.	MligTC455_29672	2338	48.7	Mlig455_038550, Mlig455_052206	Neo: - Age: Down-Up-Up		0.955	-	-	-	-	0.955	-	Mlig455_038550 {REF} {Length: 2629} {RNA1509_32724, RNA1509_49539, RNA1509_7907} {RNA1310_16404, RNA1509_32724, RNA1509_49539, RNA1509_7907} {RNA1509_32724, RNA1509_49539, RNA1509_7907, RNA815_10801} Mlig455_052206 {REF} {Length: 1979} {RNA1509_32724, RNA1509_43589} {RNA1310_16404, RNA1509_43589} {RNA1509_43589, RNA815_10801}
14.	MligTC455_26840	353	7.36	Mlig455_020643	Neo: - Age: -	PIF1	0.954	-	-	0.954	-	-	-	Mlig455_020643 {REF} {Length: 12767} {Pfam: PIF1-like helicase [PF05970.16, score=324.2]; Helitron helicase-like domain at N-terminus [PF14214.8, score=197.6]; AAA domain [PF13604.8, score=47.7]; Helicase [PF02689.16, score=22.5]; UvrD-like helicase C-terminal domain [PF13538.8, score=20.0]} {Human: ENSG00000140451, PIF1, PIF1 5'-to-3' DNA helicase, [Score=96.7, Expect=1e-19]} {Mouse: ENSMUSG00000041064, Pif1, PIF1 5'-to-3' DNA helicase, [Score=91.3, Expect=4e-18]} {Dmel: FBgn0031540, Pif1, Pif1 ortholog, [Score=90.1, Expect=7e-18]} {Celegans: WBGene00019136, F59H6.5, [RH, Score=778, Expect=0.0]} {Smed: dd_Smed_v6_16842_0_1, dd_Smed_v6_16842_0_1, [Score=105, Expect=8e-23]} {RNA1509_48797} {RNA1310_4110} {RNA815_358.1}
15.	MligTC455_47414	197	4.09	Mlig455_039028	Neo: - Age: logFC(26M/2M)=-0.558		0.953	-	-	-	-	0.953	-	Mlig455_039028 {REF} {Length: 2399} {Pfam: Integrase core domain [PF00665.28, score=45.7]} {Smed: dd_Smed_v6_94688_0_1, dd_Smed_v6_94688_0_1, [Score=58.5, Expect=4e-11]} {RNA1509_33291} {RNA1310_1940.1} {RNA815_1595}
16.	MligTC455_50937	13872	289	Mlig455_002623	Neo: - Age: logFC(26M/2M)=-0.326 Regeneration-downregulated R6: -1.088 Regeneration-depleted R6: -1.088		0.952	-	-	-	-	0.952	-	Mlig455_002623 {REF} {Length: 868} {TRANSSPLICED} {Pfam: Dynein light chain type 1 [PF01221.20, score=55.1]; EF hand [PF00036.34, score=40.9]; EF-hand domain [PF13405.8, score=30.7]; EF-hand domain pair [PF13499.8, score=29.7]; EF hand [PF13202.8, score=26.4]} {Smed: dd_Smed_v6_16347_0_1, dd_Smed_v6_16347_0_1, [RH, Score=123, Expect=4e-36]} {RNA1509_12924, RNA1509_1318} {RNA1310_17292, RNA1509_12924, RNA1509_1318} {RNA1509_12924, RNA1509_1318, RNA815_19041}
17.	MligTC455_47412	245	5.11	Mlig455_025659	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-1.406	RTL1	0.951	-	-	-	-	0.951	-	Mlig455_025659 {REF} {Length: 3817} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=105.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=100.5]; Integrase zinc binding domain [PF17921.3, score=62.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=62.3]; Integrase core domain [PF00665.28, score=43.8]; Zinc knuckle [PF00098.25, score=21.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=91.7, Expect=6e-18]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=63.9, Expect=1e-09]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=291, Expect=3e-82]} {RNA1509_33291} {RNA1310_923.1} {RNA815_1595}

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