Data search
Results for MligTC455_29687
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29687 | 2159 | 44.97 | Mlig455_041331 | Neo: - Age: - Regeneration-enriched BL: 1.814 |
SRSF4 | Mlig455_041331 {REF} {Length: 3942} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=94.9]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [Score=176, Expect=8e-51]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [Score=178, Expect=8e-52]} {Dmel: FBgn0004587, B52, [Score=151, Expect=4e-43]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [Score=136, Expect=3e-38]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [Score=160, Expect=4e-47]} {RNA1509_7126} {RNA1310_15244.1} {RNA815_1669.1} |
Cumulative graph for MligTC455_29687
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.116 | 5.484 | 0.87013 | 1.00000 | |
| RegionR2 | -0.384 | 5.484 | 0.23997 | 0.61457 | |
| RegionR3 | -0.159 | 5.484 | 0.55686 | 1.00000 | |
| RegionR4 | 0.616 | 5.484 | 0.04133 | 0.16927 | |
| RegionR5 | 0.37 | 5.484 | 0.12503 | 0.35618 | |
| RegionR6 | -0.137 | 5.484 | 0.62457 | 1.00000 | |
| RegionR7 | -0.498 | 5.484 | 0.18962 | 0.79282 | |
| RegionR8 | 0.076 | 5.484 | 0.85811 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.662 | 5.484 | 0.43406 | 1.00000 | |
| RegenerationR2 | 0.274 | 5.484 | 0.34229 | 0.77672 | |
| RegenerationR3 | 0.821 | 5.484 | 0.00821 | 0.16565 | |
| RegenerationR4 | 0.567 | 5.484 | 0.06092 | 0.39549 | |
| RegenerationR5 | 0.563 | 5.484 | 0.04584 | 0.34933 | |
| RegenerationR6 | 1.554 | 5.484 | 0.00000 | 0.00022 | |
| RegenerationBL | 1.814 | 5.484 | 0.00000 | 0.00000 | |
| RegenerationTP | 0.821 | 5.484 | 0.02848 | 0.28358 |
Genes with expression patterns similar to MligTC455_29687
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29687 | 2159 | 44.97 | Mlig455_041331 | Neo: - Age: - Regeneration-enriched BL: 1.814 |
SRSF4 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_041331 {REF} {Length: 3942} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=94.9]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [Score=176, Expect=8e-51]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [Score=178, Expect=8e-52]} {Dmel: FBgn0004587, B52, [Score=151, Expect=4e-43]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [Score=136, Expect=3e-38]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [Score=160, Expect=4e-47]} {RNA1509_7126} {RNA1310_15244.1} {RNA815_1669.1} |
| 2. | MligTC455_29688 | 2223 | 46.31 | Mlig455_041357 | Neo: Int S/G2/M Age: - Regeneration-enriched BL: 1.780 |
SRSF4 | 4.906 | 0.975 | 0.973 | - | 0.999 | 0.996 | 0.963 | Mlig455_041357 {REF} {Length: 3846} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=97.1]} {Human: ENSG00000116350, SRSF4, serine and arginine rich splicing factor 4, [Score=183, Expect=2e-55]} {Mouse: ENSMUSG00000028911, Srsf4, serine/arginine-rich splicing factor 4, [Score=184, Expect=8e-55]} {Dmel: FBgn0004587, B52, [Score=155, Expect=3e-45]} {Celegans: WBGene00004699, rsp-2, Probable splicing factor, arginine/serine-rich 2, [Score=137, Expect=3e-39]} {Smed: dd_Smed_v6_3431_0_1, dd_Smed_v6_3431_0_1, [Score=166, Expect=6e-50]} {RNA1509_7126} {RNA1310_2750} {RNA815_11603} |
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