TomoSeq data search

Data search

Results for MligTC455_29734

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29734

257

5.35

Mlig455_028119

Neo: -

Age: -

XDH

Mlig455_028119 {REF} {Length: 2100} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=435.8]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=541, Expect=8e-179]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=514, Expect=1e-168]} {Dmel: FBgn0003308, ry, rosy, [Score=484, Expect=1e-157]} {Celegans: WBGene00010083, xhd-1, [Score=459, Expect=4e-148]} {RNA1509_5759} {RNA1310_1612.1} {RNA815_3017}

Cumulative graph for MligTC455_29734

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	0.295	2.96	0.87020	1.00000
RegionR2	0.33	2.96	0.75130	1.00000
RegionR3	1.685	2.96	0.03593	0.32928
RegionR4	0.404	2.96	0.68269	0.97614
RegionR5	-0.026	2.96	0.98272	1.00000
RegionR6	0.985	2.96	0.25037	0.83656
RegionR7	-0.042	2.96	0.99729	1.00000
RegionR8	-3.631	2.96	0.11626	0.62928

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	1.02	2.96	0.68823	1.00000
RegenerationR2	1.714	2.96	0.06195	0.40834
RegenerationR3	0.339	2.96	0.72923	0.95749
RegenerationR4	0.333	2.96	0.75484	0.97091
RegenerationR5	-0.632	2.96	0.53327	0.87620
RegenerationR6	0.604	2.96	0.53930	0.83262
RegenerationBL	3.154	2.96	0.00873	0.09261
RegenerationTP	2.532	2.96	0.12712	0.53914

Genes with expression patterns similar to MligTC455_29734

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29734	257	5.35	Mlig455_028119	Neo: - Age: -	XDH	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028119 {REF} {Length: 2100} {Pfam: Molybdopterin-binding domain of aldehyde dehydrogenase [PF02738.20, score=435.8]} {Human: ENSG00000158125, XDH, xanthine dehydrogenase, [Score=541, Expect=8e-179]} {Mouse: ENSMUSG00000024066, Xdh, xanthine dehydrogenase, [Score=514, Expect=1e-168]} {Dmel: FBgn0003308, ry, rosy, [Score=484, Expect=1e-157]} {Celegans: WBGene00010083, xhd-1, [Score=459, Expect=4e-148]} {RNA1509_5759} {RNA1310_1612.1} {RNA815_3017}
2.	MligTC455_41290	435	9.06	Mlig455_005154, Mlig455_021616	Neo: - Age: -		0.97	-	-	-	-	-	0.970	Mlig455_005154 {REF} {Length: 3470} {TRANSSPLICED} {RNA1509_11738} {RNA1310_5198, RNA1509_11738} {RNA1509_11738, RNA815_1812} Mlig455_021616 {REF} {Length: 3484} {TRANSSPLICED} {RNA1509_11738, RNA1509_30879} {RNA1310_5198, RNA1509_30879} {RNA1509_30879, RNA815_1812}
3.	MligTC455_42516	171	3.55	Mlig455_054052	Neo: - Age: -	PLXDC2	0.96	-	-	-	-	-	0.960	Mlig455_054052 {REF} {Length: 3561} {Human: ENSG00000120594, PLXDC2, plexin domain containing 2, [RH, Score=174, Expect=4e-48]; ENSG00000161381, PLXDC1, plexin domain containing 1, [RH, Score=173, Expect=4e-48]} {Mouse: ENSMUSG00000026748, Plxdc2, plexin domain containing 2, [RH, Score=183, Expect=8e-52]; ENSMUSG00000017417, Plxdc1, plexin domain containing 1, [RH, Score=177, Expect=2e-49]} {Dmel: FBgn0028331, l(1)G0289, lethal (1) G0289, [RH, Score=161, Expect=3e-43]} {Celegans: WBGene00007982, pxd-1, PleXin Domain containing, [RH, Score=162, Expect=3e-44]} {Smed: dd_Smed_v6_68203_0_1, dd_Smed_v6_68203_0_1, [RH, Score=95.1, Expect=4e-23]} {RNA1509_4680} {RNA1310_14519.1} {RNA815_6406.1}
4.	MligTC455_48787	451	9.4	Mlig455_049050	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_049050 {REF} {Length: 1894} {Pfam: Seven in absentia protein family [PF03145.18, score=25.5]} {RNA1509_54126} {RNA1310_15112.1} {RNA815_6351.1}
5.	MligTC455_36267	756	15.75	Mlig455_017343	Neo: - Age: logFC(26M/2M)=-0.265		0.958	-	-	-	0.958	-	-	Mlig455_017343 {REF} {Length: 3364} {RNA1509_19508, RNA1509_6517} {RNA1310_11757.1, RNA1509_19508} {RNA1509_19508, RNA815_3298.1}
6.	MligTC455_17090	276	5.75	Mlig455_029893	Neo: Irradiation Age: -	TRMT10A	0.957	-	-	0.957	-	-	-	Mlig455_029893 {REF} {Length: 2407} {TRANSSPLICED} {Pfam: tRNA (Guanine-1)-methyltransferase [PF01746.23, score=90.1]; Omp85 superfamily domain [PF01103.25, score=42.6]} {Human: ENSG00000145331, TRMT10A, tRNA methyltransferase 10A, [RH, Score=160, Expect=2e-43]} {Mouse: ENSMUSG00000004127, Trmt10a, tRNA methyltransferase 10A, [RH, Score=165, Expect=3e-45]} {Dmel: FBgn0031189, CG14618, [RH, Score=134, Expect=2e-34]} {Celegans: WBGene00009131, F25H8.1, [RH, Score=170, Expect=7e-48]} {Smed: dd_Smed_v6_9031_0_1, dd_Smed_v6_9031_0_1, [RH, Score=200, Expect=3e-59]} {RNA1509_54497} {RNA1310_25443} {RNA815_16471.1}
7.	MligTC455_20936	149	3.11	Mlig455_022961	Neo: - Age: -	SLC35B2	0.953	-	-	-	-	-	0.953	Mlig455_022961 {REF} {Length: 3403} {Pfam: UAA transporter family [PF08449.13, score=110.5]; Triose-phosphate Transporter family [PF03151.18, score=19.9]} {Human: ENSG00000157593, SLC35B2, solute carrier family 35 member B2, [Score=173, Expect=6e-48]} {Mouse: ENSMUSG00000037089, Slc35b2, solute carrier family 35, member B2, [Score=172, Expect=2e-48]} {Dmel: FBgn0038524, sll, slalom, [Score=189, Expect=6e-54]} {Celegans: WBGene00004206, pst-1, Adenosine 3'-phospho 5'-phosphosulfate transporter 1, [Score=143, Expect=1e-37]} {Smed: dd_Smed_v6_6703_0_2, dd_Smed_v6_6703_0_2, [Score=184, Expect=4e-52]} {RNA1509_54238} {RNA1310_21943.1, RNA1509_54238} {RNA1509_54238, RNA815_11106.1}
8.	MligTC455_53361	98	2.05	Mlig455_042366	Neo: Int S/G2/M Age: Up-Down-Up, logFC(26M/2M)=0.875		0.953	-	-	0.953	-	-	-	Mlig455_042366 {REF} {Length: 1614} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=27.3]; Acetyl-coA carboxylase zinc finger domain [PF17848.3, score=22.3]} {RNA1509_35522} {RNA1310_6611} {RNA815_4725}
9.	MligTC455_11480	90	1.88	Mlig455_039020	Neo: - Age: Down-Down-Up, logFC(26M/2M)=-1.231	AVP	0.951	-	-	-	-	-	0.951	Mlig455_039020 {REF} {Length: 1893} {Pfam: Neurohypophysial hormones, C-terminal Domain [PF00184.19, score=53.2]} {Human: ENSG00000101200, AVP, arginine vasopressin, [Score=53.1, Expect=6e-09]} {Mouse: ENSMUSG00000037727, Avp, arginine vasopressin, [Score=56.6, Expect=2e-10]} {RNA1509_55830} {RNA1310_31994} {RNA815_9217}
10.	MligTC455_39102	413	8.6	Mlig455_061920	Neo: - Age: - Regeneration-downregulated BL: -3.081 Regeneration-depleted BL: -3.081		0.951	-	-	-	-	-	0.951	Mlig455_061920 {REF} {Length: 2570} {Pfam: EF hand [PF00036.34, score=39.3]; EF-hand domain [PF13405.8, score=29.5]; EF-hand domain pair [PF13499.8, score=24.5]; EF hand [PF13202.8, score=24.3]; EF-hand domain pair [PF13833.8, score=23.4]} {Celegans: WBGene00000287, cal-3, CALmodulin related genes, [Score=48.1, Expect=1e-06]} {Smed: dd_Smed_v6_13677_0_1, dd_Smed_v6_13677_0_1, [Score=151, Expect=7e-45]} {RNA1509_25282} {RNA1310_29885.1} {RNA815_14774.1}

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