Data search


search
Exact
Search

Results for MligTC455_29775

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29775 152 3.17 Mlig455_039030

Neo: -

Age: -

Mlig455_039030 {REF} {Length: 823} {RNA1509_53099} {RNA1310_47210.1, RNA1509_53099} {RNA1509_53099, RNA815_24422.1}

Cumulative graph for MligTC455_29775

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.314 2.439 0.40199 1.00000
RegionR2 1.409 2.439 0.15431 0.49135
RegionR3 0.192 2.439 0.77738 1.00000
RegionR4 0.816 2.439 0.42457 0.75227
RegionR5 0.133 2.439 0.80124 1.00000
RegionR6 0.079 2.439 0.82802 1.00000
RegionR7 0.858 2.439 0.46629 1.00000
RegionR8 0.826 2.439 0.55878 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.808 2.439 0.99993 1.00000
RegenerationR2 -0.012 2.439 0.97536 1.00000
RegenerationR3 0.366 2.439 0.57250 0.89505
RegenerationR4 -0.606 2.439 0.34991 0.78028
RegenerationR5 -0.729 2.439 0.21758 0.65211
RegenerationR6 0.016 2.439 0.98636 1.00000
RegenerationBL 0.195 2.439 0.83089 1.00000
RegenerationTP -0.216 2.439 0.82167 1.00000


Genes with expression patterns similar to MligTC455_29775

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29775 152 3.17 Mlig455_039030

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_039030 {REF} {Length: 823} {RNA1509_53099} {RNA1310_47210.1, RNA1509_53099} {RNA1509_53099, RNA815_24422.1}
2. MligTC455_29767 254 5.29 Mlig455_037958

Neo: -

Age: Down-Up-Down

MAP3K19 2.582 - - 0.956 - 0.826 0.800 Mlig455_037958 {REF} {Length: 4327} {Pfam: Protein kinase domain [PF00069.27, score=189.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=134.1]; Ankyrin repeats (many copies) [PF13637.8, score=125.1]; Ankyrin repeats (3 copies) [PF12796.9, score=101.2]; Ankyrin repeats (many copies) [PF13857.8, score=76.9]; Ankyrin repeat [PF13606.8, score=50.0]; Ankyrin repeat [PF00023.32, score=35.5]; Fungal protein kinase [PF17667.3, score=25.2]; ABC1 atypical kinase-like domain [PF03109.18, score=24.0]; CRISPR-associated protein [PF12469.10, score=21.0]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=162, Expect=1e-40]} {Mouse: ENSMUSG00000051590, Map3k19, mitogen-activated protein kinase kinase kinase 19, [Score=160, Expect=1e-41]} {Dmel: FBgn0266465, GckIII, Germinal centre kinase III, [Score=137, Expect=2e-33]} {Celegans: WBGene00001526, gck-1, Germinal center kinase 1, [Score=127, Expect=4e-30]} {Smed: dd_Smed_v6_2030_0_14, dd_Smed_v6_2030_0_14, [Score=136, Expect=2e-34]} {RNA1509_41724, RNA1509_45037} {RNA1310_17852.1, RNA1509_41724} {RNA1509_41724, RNA815_5323.2}
3. MligTC455_30966 462 9.62 Mlig455_048761, Mlig455_059265

Neo: Irradiation

Age: -

1.829 - - 0.854 0.975 - -

Mlig455_048761 {REF} {Length: 4093} {Pfam: PH domain [PF00169.31, score=21.2]} {RNA1509_51524} {RNA1310_11242.1, RNA1509_51524} {RNA1509_51524, RNA815_26285}

Mlig455_059265 {REF} {Length: 2692} {Pfam: PH domain [PF00169.31, score=21.2]} {RNA1509_56130} {RNA1310_11242.1, RNA1509_56130} {RNA1509_56130, RNA815_26285}
4. MligTC455_51789 175 3.64 Mlig455_067392

Neo: -

Age: logFC(26M/2M)=0.643

SPEG 1.674 - - 0.952 - - 0.722 Mlig455_067392 {REF} {Length: 1915} {TRANSSPLICED} {Pfam: Immunoglobulin I-set domain [PF07679.18, score=106.9]; Immunoglobulin domain [PF13927.8, score=74.6]; Immunoglobulin domain [PF13895.8, score=43.7]; Immunoglobulin domain [PF00047.27, score=43.2]; CD80-like C2-set immunoglobulin domain [PF08205.14, score=25.0]} {Human: ENSG00000072195, SPEG, SPEG complex locus, [Score=89.7, Expect=4e-19]} {Mouse: ENSMUSG00000022836, Mylk, myosin, light polypeptide kinase, [Score=86.3, Expect=6e-18]; ENSMUSG00000026207, Speg, SPEG complex locus, [Score=85.1, Expect=1e-17]} {Dmel: FBgn0052311, zormin, [Score=84.0, Expect=2e-17]} {Celegans: WBGene00004130, ketn-1, KETtiN (Drosophila actin-binding) homolog; Kettin, [Score=80.1, Expect=3e-16]} {Smed: dd_Smed_v6_3381_0_1, dd_Smed_v6_3381_0_1, [Score=97.8, Expect=3e-22]} {RNA1509_46253} {RNA1310_14115, RNA1509_46253} {RNA1509_46253, RNA815_27903}
5. MligTC455_53960 381 7.93 Mlig455_039523

Neo: -

Age: logFC(26M/2M)=-0.527

Region-enriched R2: 1.863/0.02753

TTLL7 1.661 - - 0.954 - 0.707 - Mlig455_039523 {REF} {Length: 2811} {Pfam: Tubulin-tyrosine ligase family [PF03133.17, score=44.5]} {Human: ENSG00000137941, TTLL7, tubulin tyrosine ligase like 7, [Score=146, Expect=5e-37]} {Mouse: ENSMUSG00000036745, Ttll7, tubulin tyrosine ligase-like family, member 7, [Score=261, Expect=2e-76]} {Dmel: FBgn0039501, CG5987, [Score=62.8, Expect=5e-10]} {Smed: dd_Smed_v6_13600_0_1, dd_Smed_v6_13600_0_1, [Score=118, Expect=1e-27]} {RNA1509_8901} {RNA1310_4651} {RNA815_1757}
6. MligTC455_15671 88 1.84 Mlig455_059458

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.370

Region-enriched R4: 4.705/0.00509

KIAA0895L 0.983 - - 0.983 - - - Mlig455_059458 {REF} {Length: 3483} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF1704) [PF08014.13, score=37.3]} {Human: ENSG00000196123, KIAA0895L, KIAA0895 like, [RH, Score=151, Expect=4e-40]; ENSG00000164542, KIAA0895, KIAA0895, [RH, Score=150, Expect=1e-39]} {Mouse: ENSMUSG00000014837, 4931428F04Rik, RIKEN cDNA 4931428F04 gene, [RH, Score=156, Expect=4e-42]} {Smed: dd_Smed_v6_103892_0_1, dd_Smed_v6_103892_0_1, [RH, Score=98.6, Expect=3e-25]} {RNA1509_47713, RNA1509_49841} {RNA1310_17536.1, RNA1509_47713, RNA1509_49841} {RNA1509_47713, RNA1509_49841, RNA815_7463.1}
7. MligTC455_00601 133 2.77 Mlig455_054054

Neo: -

Age: -

0.972 - - 0.972 - - - Mlig455_054054 {REF} {Length: 2328} {RNA1509_1755} {RNA1310_2220.1} {RNA815_703.1}
8. MligTC455_34792 238 4.96 Mlig455_045574

Neo: -

Age: logFC(26M/2M)=-0.239

0.972 - - 0.972 - - - Mlig455_045574 {REF} {Length: 4478} {Smed: dd_Smed_v6_27312_0_1, dd_Smed_v6_27312_0_1, [RH, Score=160, Expect=9e-40]} {RNA1509_6675} {RNA1310_2307, RNA1509_6675} {RNA1509_6675, RNA815_650}
9. MligTC455_14487 157 3.26 Mlig455_020723, Mlig455_020790

Neo: -

Age: logFC(26M/2M)=-0.434

FBXL7 0.96 - - - - 0.960 -

Mlig455_020723 {REF} {Length: 1892} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=44.0]; F-box domain [PF00646.35, score=29.0]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=51.6, Expect=3e-06]; ENSG00000153558, FBXL2, F-box and leucine rich repeat protein 2, [Score=50.1, Expect=6e-06]; ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=49.7, Expect=9e-06]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=51.6, Expect=1e-06]; ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=50.4, Expect=4e-06]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=50.4, Expect=1e-06]} {Dmel: FBgn0033639, CG9003, [Score=49.3, Expect=7e-06]} {RNA1509_13719} {RNA1310_4290.1} {RNA815_9704}

Mlig455_020790 {REF} {Length: 1871} {Pfam: F-box-like [PF12937.9, score=44.1]; F-box domain [PF00646.35, score=29.2]; Leucine Rich repeats (2 copies) [PF12799.9, score=24.5]} {Human: ENSG00000183580, FBXL7, F-box and leucine rich repeat protein 7, [Score=52.8, Expect=9e-07]; ENSG00000108306, FBXL20, F-box and leucine rich repeat protein 20, [Score=50.8, Expect=4e-06]; ENSG00000153558, FBXL2, F-box and leucine rich repeat protein 2, [Score=50.4, Expect=6e-06]} {Mouse: ENSMUSG00000032507, Fbxl2, F-box and leucine-rich repeat protein 2, [Score=52.4, Expect=9e-07]; ENSMUSG00000043556, Fbxl7, F-box and leucine-rich repeat protein 7, [Score=51.6, Expect=2e-06]; ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=50.1, Expect=2e-06]} {Dmel: FBgn0033639, CG9003, [Score=51.6, Expect=1e-06]} {RNA1509_13719} {RNA1310_4290.1} {RNA815_9704}
10. MligTC455_18996 34 0.71 Mlig455_032938

Neo: -

Age: -

0.956 - - 0.956 - - - Mlig455_032938 {REF} {Length: 1648} {Pfam: Transposase DDE domain [PF01609.23, score=18.8]} {RNA1509_39626} {RNA1310_29809} {RNA815_13636}
11. MligTC455_18848 172 3.59 Mlig455_019290

Neo: Int S/G2/M

Age: -

Regeneration-enriched BL: 4.472
Regeneration-enriched R6: 3.266
Regeneration-enriched R4: 3.038

0.955 - - - 0.955 - - Mlig455_019290 {REF} {Length: 1440} {TRANSSPLICED} {Pfam: SUZ domain [PF12752.9, score=43.1]} {RNA1509_29907, RNA1509_41034} {RNA1310_22799, RNA1509_29907, RNA1509_41034} {RNA1509_29907, RNA1509_41034, RNA815_9711.1}
12. MligTC455_31916 78 1.63 Mlig455_067080

Neo: -

Age: -

0.954 - - 0.954 - - - Mlig455_067080 {REF} {Length: 1168} {NoTransDecoderORF} {RNA1509_48060} {RNA1310_6149} {RNA815_1772.1}
13. MligTC455_49770 476 9.92 Mlig455_020682, Mlig455_020688, Mlig455_020755

Neo: -

Age: logFC(26M/2M)=-0.284

Region-enriched R2: 2.437/0.04447

TCTN2 0.95 - - 0.950 - - -

Mlig455_020682 {REF} {Length: 3354} {Pfam: Protein of unknown function (DUF1619) [PF07773.13, score=128.7]} {Human: ENSG00000168778, TCTN2, tectonic family member 2, [RH, Score=120, Expect=5e-28]} {Mouse: ENSMUSG00000038593, Tctn1, tectonic family member 1, [Score=86.7, Expect=2e-17]} {Smed: dd_Smed_v6_11318_0_1, dd_Smed_v6_11318_0_1, [RH, Score=144, Expect=6e-36]} {RNA1509_12497} {RNA1310_8819, RNA1509_12497} {RNA1509_12497, RNA815_5215}

Mlig455_020688 {REF} {Length: 3253} {Pfam: Protein of unknown function (DUF1619) [PF07773.13, score=128.9]} {Human: ENSG00000168778, TCTN2, tectonic family member 2, [RH, Score=121, Expect=3e-28]} {Mouse: ENSMUSG00000038593, Tctn1, tectonic family member 1, [Score=85.5, Expect=5e-17]} {Smed: dd_Smed_v6_11318_0_1, dd_Smed_v6_11318_0_1, [RH, Score=146, Expect=2e-36]} {RNA1509_12497} {RNA1310_8819} {RNA815_5215}

Mlig455_020755 {REF} {Length: 1235} {Pfam: Protein of unknown function (DUF1619) [PF07773.13, score=50.9]} {RNA1509_12497} {RNA1310_10004} {RNA815_5215}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA