TomoSeq data search

Data search

Results for MligTC455_29792

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29792

5377

112.01

Mlig455_042440

Neo: -

Age: logFC(26M/2M)=-0.557

Mlig455_042440 {REF} {Length: 1936} {Pfam: Immunoglobulin domain [PF13927.8, score=49.9]; Immunoglobulin domain [PF13895.8, score=37.6]; Immunoglobulin domain [PF00047.27, score=33.8]; Immunoglobulin I-set domain [PF07679.18, score=33.6]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.6]} {Mouse: ENSMUSG00000037405, Icam1, intercellular adhesion molecule 1, [Score=48.9, Expect=3e-06]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_19218} {RNA1310_14802.2} {RNA815_5680}

Cumulative graph for MligTC455_29792

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.636	6.932	0.11336	0.69759
RegionR2	-0.236	6.932	0.19125	0.54719
RegionR3	0.576	6.932	0.00003	0.00168
RegionR4	0.477	6.932	0.00420	0.03180
RegionR5	0.057	6.932	0.67614	1.00000
RegionR6	0.069	6.932	0.64031	1.00000
RegionR7	-0.171	6.932	0.35445	0.99047
RegionR8	-0.136	6.932	0.54510	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.381	6.932	0.52113	1.00000
RegenerationR2	-0.024	6.932	0.87678	1.00000
RegenerationR3	-0.506	6.932	0.00204	0.07738
RegenerationR4	-0.477	6.932	0.00484	0.09756
RegenerationR5	-0.446	6.932	0.00586	0.14047
RegenerationR6	-0.266	6.932	0.12327	0.43165
RegenerationBL	-0.791	6.932	0.00019	0.00703
RegenerationTP	-0.751	6.932	0.00091	0.04542

Genes with expression patterns similar to MligTC455_29792

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29792	5377	112.01	Mlig455_042440	Neo: - Age: logFC(26M/2M)=-0.557		6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_042440 {REF} {Length: 1936} {Pfam: Immunoglobulin domain [PF13927.8, score=49.9]; Immunoglobulin domain [PF13895.8, score=37.6]; Immunoglobulin domain [PF00047.27, score=33.8]; Immunoglobulin I-set domain [PF07679.18, score=33.6]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.6]} {Mouse: ENSMUSG00000037405, Icam1, intercellular adhesion molecule 1, [Score=48.9, Expect=3e-06]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_19218} {RNA1310_14802.2} {RNA815_5680}
2.	MligTC455_29793	5433	113.2	Mlig455_042491	Neo: - Age: logFC(26M/2M)=-0.317		5.981	0.993	0.998	0.996	1.000	0.996	0.998	Mlig455_042491 {REF} {Length: 1965} {Pfam: Immunoglobulin domain [PF13927.8, score=49.6]; Immunoglobulin domain [PF13895.8, score=36.6]; Immunoglobulin domain [PF00047.27, score=34.6]; Immunoglobulin I-set domain [PF07679.18, score=32.6]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.9]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=49.3, Expect=2e-06]} {RNA1509_16605, RNA1509_19218, RNA1509_590} {RNA1310_14802.2, RNA1509_16605, RNA1509_19218, RNA1509_590} {RNA1509_16605, RNA1509_19218, RNA1509_590, RNA815_5680}
3.	MligTC455_46013	8049	167.68	Mlig455_028678	Neo: - Age: logFC(26M/2M)=0.528	SOD1	1.706	-	-	-	0.960	0.746	-	Mlig455_028678 {REF} {Length: 921} {TRANSSPLICED} {Pfam: Copper/zinc superoxide dismutase (SODC) [PF00080.22, score=150.0]} {Human: ENSG00000142168, SOD1, superoxide dismutase 1, [RH, Score=192, Expect=5e-63]} {Mouse: ENSMUSG00000022982, Sod1, superoxide dismutase 1, soluble, [RH, Score=195, Expect=2e-64]} {Dmel: FBgn0003462, Sod1, Superoxide dismutase 1, [RH, Score=191, Expect=4e-63]} {Celegans: WBGene00004933, sod-4, Extracellular superoxide dismutase [Cu-Zn], [RH, Score=181, Expect=3e-58]} {Smed: dd_Smed_v6_519_0_1, dd_Smed_v6_519_0_1, [RH, Score=209, Expect=4e-70]} {RNA1509_1270} {RNA1310_35749.1} {RNA815_16089.1}
4.	MligTC455_46014	8000	166.66	Mlig455_028698	Neo: - Age: -	SOD1	1.695	-	-	-	0.966	0.729	-	Mlig455_028698 {REF} {Length: 1329} {TRANSSPLICED} {Pfam: Copper/zinc superoxide dismutase (SODC) [PF00080.22, score=150.6]} {Human: ENSG00000142168, SOD1, superoxide dismutase 1, [RH, Score=191, Expect=8e-63]} {Mouse: ENSMUSG00000022982, Sod1, superoxide dismutase 1, soluble, [RH, Score=194, Expect=3e-64]} {Dmel: FBgn0003462, Sod1, Superoxide dismutase 1, [RH, Score=189, Expect=2e-62]} {Celegans: WBGene00004933, sod-4, Extracellular superoxide dismutase [Cu-Zn], [RH, Score=178, Expect=2e-57]} {Smed: dd_Smed_v6_519_0_1, dd_Smed_v6_519_0_1, [RH, Score=207, Expect=2e-69]} {RNA1509_14568, RNA1509_15259, RNA1509_20413} {RNA1310_49565, RNA1509_14568, RNA1509_15259, RNA1509_20413} {RNA1509_14568, RNA1509_15259, RNA1509_20413, RNA815_16089.1}
5.	MligTC455_39925	1605	33.44	Mlig455_040142	Neo: - Age: - Region-enriched R4: 1.550/0.00050		0.971	-	-	-	0.971	-	-	Mlig455_040142 {REF} {Length: 1049} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1757) [PF08560.12, score=152.5]} {Smed: dd_Smed_v6_7699_0_1, dd_Smed_v6_7699_0_1, [Score=108, Expect=3e-30]} {RNA1509_24812, RNA1509_38244} {RNA1310_35424, RNA1509_24812, RNA1509_38244} {RNA1509_24812, RNA1509_38244, RNA815_15167.2}
6.	MligTC455_41638	836	17.41	Mlig455_048407	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.265 Region-enriched R5: 1.975/0.00281		0.968	-	-	-	0.968	-	-	Mlig455_048407 {REF} {Length: 1382} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13857.8, score=27.7]; Ankyrin repeats (3 copies) [PF12796.9, score=21.2]; Ankyrin repeat [PF00023.32, score=20.4]; Ankyrin repeat [PF13606.8, score=18.9]} {RNA1509_12522} {RNA1310_20494, RNA1509_12522} {RNA1509_12522, RNA815_11245}
7.	MligTC455_24490	4954	103.2	Mlig455_053651	Neo: - Age: -	ATP2B2	0.954	-	-	-	0.954	-	-	Mlig455_053651 {REF} {Length: 4649} {TRANSSPLICED} {Pfam: Cation transporting ATPase, C-terminus [PF00689.23, score=150.9]; E1-E2 ATPase [PF00122.22, score=109.1]; Cation transport ATPase (P-type) [PF13246.8, score=67.7]; haloacid dehalogenase-like hydrolase [PF00702.28, score=59.0]; Cation transporter/ATPase, N-terminus [PF00690.28, score=56.4]; Plasma membrane calcium transporter ATPase C terminal [PF12424.10, score=55.3]; haloacid dehalogenase-like hydrolase [PF08282.14, score=26.4]} {Human: ENSG00000157087, ATP2B2, ATPase plasma membrane Ca2+ transporting 2, [RH, Score=1272, Expect=0.0]; ENSG00000067842, ATP2B3, ATPase plasma membrane Ca2+ transporting 3, [RH, Score=1266, Expect=0.0]; ENSG00000058668, ATP2B4, ATPase plasma membrane Ca2+ transporting 4, [RH, Score=1242, Expect=0.0]; ENSG00000070961, ATP2B1, ATPase plasma membrane Ca2+ transporting 1, [RH, Score=1220, Expect=0.0]} {Mouse: ENSMUSG00000031376, Atp2b3, ATPase, Ca++ transporting, plasma membrane 3, [RH, Score=1263, Expect=0.0]; ENSMUSG00000030302, Atp2b2, ATPase, Ca++ transporting, plasma membrane 2, [RH, Score=1262, Expect=0.0]; ENSMUSG00000019943, Atp2b1, ATPase, Ca++ transporting, plasma membrane 1, [RH, Score=1230, Expect=0.0]; ENSMUSG00000026463, Atp2b4, ATPase, Ca++ transporting, plasma membrane 4, [RH, Score=1204, Expect=0.0]} {Dmel: FBgn0259214, PMCA, plasma membrane calcium ATPase, [RH, Score=1311, Expect=0.0]} {Celegans: WBGene00003153, mca-3, Calcium-transporting ATPase, [RH, Score=1269, Expect=0.0]} {Smed: dd_Smed_v6_4145_0_1, dd_Smed_v6_4145_0_1, [RH, Score=1348, Expect=0.0]} {RNA1509_15679, RNA1509_19149, RNA1509_374, RNA1509_55618, RNA1509_59128} {RNA1310_4479.2, RNA1509_15679, RNA1509_19149, RNA1509_374, RNA1509_55618, RNA1509_59128} {RNA1509_15679, RNA1509_19149, RNA1509_374, RNA1509_55618, RNA1509_59128, RNA815_368.1}
8.	MligTC455_24489	5045	105.1	Mlig455_022116	Neo: - Age: -	ATP2B2	0.952	-	-	-	0.952	-	-	Mlig455_022116 {REF} {Length: 4646} {TRANSSPLICED} {Pfam: Cation transporting ATPase, C-terminus [PF00689.23, score=154.1]; E1-E2 ATPase [PF00122.22, score=109.1]; Cation transport ATPase (P-type) [PF13246.8, score=66.5]; haloacid dehalogenase-like hydrolase [PF00702.28, score=59.5]; Cation transporter/ATPase, N-terminus [PF00690.28, score=56.4]; Plasma membrane calcium transporter ATPase C terminal [PF12424.10, score=55.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=26.2]} {Human: ENSG00000157087, ATP2B2, ATPase plasma membrane Ca2+ transporting 2, [RH, Score=1271, Expect=0.0]; ENSG00000067842, ATP2B3, ATPase plasma membrane Ca2+ transporting 3, [RH, Score=1267, Expect=0.0]; ENSG00000058668, ATP2B4, ATPase plasma membrane Ca2+ transporting 4, [RH, Score=1241, Expect=0.0]; ENSG00000070961, ATP2B1, ATPase plasma membrane Ca2+ transporting 1, [RH, Score=1219, Expect=0.0]} {Mouse: ENSMUSG00000031376, Atp2b3, ATPase, Ca++ transporting, plasma membrane 3, [RH, Score=1263, Expect=0.0]; ENSMUSG00000030302, Atp2b2, ATPase, Ca++ transporting, plasma membrane 2, [RH, Score=1261, Expect=0.0]; ENSMUSG00000019943, Atp2b1, ATPase, Ca++ transporting, plasma membrane 1, [RH, Score=1229, Expect=0.0]; ENSMUSG00000026463, Atp2b4, ATPase, Ca++ transporting, plasma membrane 4, [RH, Score=1202, Expect=0.0]} {Dmel: FBgn0259214, PMCA, plasma membrane calcium ATPase, [RH, Score=1310, Expect=0.0]} {Celegans: WBGene00003153, mca-3, Calcium-transporting ATPase, [RH, Score=1270, Expect=0.0]} {Smed: dd_Smed_v6_4145_0_1, dd_Smed_v6_4145_0_1, [RH, Score=1351, Expect=0.0]} {RNA1509_15163, RNA1509_374, RNA1509_45766} {RNA1310_4479.2, RNA1509_15163, RNA1509_45766} {RNA1509_15163, RNA1509_45766, RNA815_368.1}

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