TomoSeq data search

Data search

Results for MligTC455_46013

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_46013

8049

167.68

Mlig455_028678

Neo: -

Age: logFC(26M/2M)=0.528

SOD1

Mlig455_028678 {REF} {Length: 921} {TRANSSPLICED} {Pfam: Copper/zinc superoxide dismutase (SODC) [PF00080.22, score=150.0]} {Human: ENSG00000142168, SOD1, superoxide dismutase 1, [RH, Score=192, Expect=5e-63]} {Mouse: ENSMUSG00000022982, Sod1, superoxide dismutase 1, soluble, [RH, Score=195, Expect=2e-64]} {Dmel: FBgn0003462, Sod1, Superoxide dismutase 1, [RH, Score=191, Expect=4e-63]} {Celegans: WBGene00004933, sod-4, Extracellular superoxide dismutase [Cu-Zn], [RH, Score=181, Expect=3e-58]} {Smed: dd_Smed_v6_519_0_1, dd_Smed_v6_519_0_1, [RH, Score=209, Expect=4e-70]} {RNA1509_1270} {RNA1310_35749.1} {RNA815_16089.1}

Cumulative graph for MligTC455_46013

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.836	7.509	0.03223	0.45487
RegionR2	0.106	7.509	0.60842	0.95658
RegionR3	0.247	7.509	0.15679	0.66955
RegionR4	0.878	7.509	0.00001	0.00022
RegionR5	0.778	7.509	0.00000	0.00006
RegionR6	0.019	7.509	0.91748	1.00000
RegionR7	-0.212	7.509	0.30807	0.94226
RegionR8	-0.98	7.509	0.00027	0.01742

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.484	7.509	0.37704	1.00000
RegenerationR2	-0.033	7.509	0.86944	1.00000
RegenerationR3	0.195	7.509	0.35162	0.77176
RegenerationR4	0.038	7.509	0.85959	1.00000
RegenerationR5	-0.035	7.509	0.86258	1.00000
RegenerationR6	0.334	7.509	0.11945	0.42473
RegenerationBL	0.416	7.509	0.04963	0.25629
RegenerationTP	0.297	7.509	0.21671	0.65977

Genes with expression patterns similar to MligTC455_46013

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_46013	8049	167.68	Mlig455_028678	Neo: - Age: logFC(26M/2M)=0.528	SOD1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_028678 {REF} {Length: 921} {TRANSSPLICED} {Pfam: Copper/zinc superoxide dismutase (SODC) [PF00080.22, score=150.0]} {Human: ENSG00000142168, SOD1, superoxide dismutase 1, [RH, Score=192, Expect=5e-63]} {Mouse: ENSMUSG00000022982, Sod1, superoxide dismutase 1, soluble, [RH, Score=195, Expect=2e-64]} {Dmel: FBgn0003462, Sod1, Superoxide dismutase 1, [RH, Score=191, Expect=4e-63]} {Celegans: WBGene00004933, sod-4, Extracellular superoxide dismutase [Cu-Zn], [RH, Score=181, Expect=3e-58]} {Smed: dd_Smed_v6_519_0_1, dd_Smed_v6_519_0_1, [RH, Score=209, Expect=4e-70]} {RNA1509_1270} {RNA1310_35749.1} {RNA815_16089.1}
2.	MligTC455_46014	8000	166.66	Mlig455_028698	Neo: - Age: -	SOD1	5.973	1.000	1.000	0.983	0.999	0.992	0.999	Mlig455_028698 {REF} {Length: 1329} {TRANSSPLICED} {Pfam: Copper/zinc superoxide dismutase (SODC) [PF00080.22, score=150.6]} {Human: ENSG00000142168, SOD1, superoxide dismutase 1, [RH, Score=191, Expect=8e-63]} {Mouse: ENSMUSG00000022982, Sod1, superoxide dismutase 1, soluble, [RH, Score=194, Expect=3e-64]} {Dmel: FBgn0003462, Sod1, Superoxide dismutase 1, [RH, Score=189, Expect=2e-62]} {Celegans: WBGene00004933, sod-4, Extracellular superoxide dismutase [Cu-Zn], [RH, Score=178, Expect=2e-57]} {Smed: dd_Smed_v6_519_0_1, dd_Smed_v6_519_0_1, [RH, Score=207, Expect=2e-69]} {RNA1509_14568, RNA1509_15259, RNA1509_20413} {RNA1310_49565, RNA1509_14568, RNA1509_15259, RNA1509_20413} {RNA1509_14568, RNA1509_15259, RNA1509_20413, RNA815_16089.1}
3.	MligTC455_39925	1605	33.44	Mlig455_040142	Neo: - Age: - Region-enriched R4: 1.550/0.00050		1.771	-	-	-	0.963	0.808	-	Mlig455_040142 {REF} {Length: 1049} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF1757) [PF08560.12, score=152.5]} {Smed: dd_Smed_v6_7699_0_1, dd_Smed_v6_7699_0_1, [Score=108, Expect=3e-30]} {RNA1509_24812, RNA1509_38244} {RNA1310_35424, RNA1509_24812, RNA1509_38244} {RNA1509_24812, RNA1509_38244, RNA815_15167.2}
4.	MligTC455_29793	5433	113.2	Mlig455_042491	Neo: - Age: logFC(26M/2M)=-0.317		1.718	-	-	-	0.957	0.761	-	Mlig455_042491 {REF} {Length: 1965} {Pfam: Immunoglobulin domain [PF13927.8, score=49.6]; Immunoglobulin domain [PF13895.8, score=36.6]; Immunoglobulin domain [PF00047.27, score=34.6]; Immunoglobulin I-set domain [PF07679.18, score=32.6]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.9]} {Mouse: ENSMUSG00000023175, Bsg, basigin, [Score=49.3, Expect=2e-06]} {RNA1509_16605, RNA1509_19218, RNA1509_590} {RNA1310_14802.2, RNA1509_16605, RNA1509_19218, RNA1509_590} {RNA1509_16605, RNA1509_19218, RNA1509_590, RNA815_5680}
5.	MligTC455_29792	5377	112.01	Mlig455_042440	Neo: - Age: logFC(26M/2M)=-0.557		1.706	-	-	-	0.960	0.746	-	Mlig455_042440 {REF} {Length: 1936} {Pfam: Immunoglobulin domain [PF13927.8, score=49.9]; Immunoglobulin domain [PF13895.8, score=37.6]; Immunoglobulin domain [PF00047.27, score=33.8]; Immunoglobulin I-set domain [PF07679.18, score=33.6]; Ig-like domain on T-cell surface glycoprotein CD3 epsilon chain [PF16681.7, score=21.6]} {Mouse: ENSMUSG00000037405, Icam1, intercellular adhesion molecule 1, [Score=48.9, Expect=3e-06]} {Smed: dd_Smed_v6_1827_0_1, dd_Smed_v6_1827_0_1, [Score=48.1, Expect=2e-06]} {RNA1509_19218} {RNA1310_14802.2} {RNA815_5680}
6.	MligTC455_24489	5045	105.1	Mlig455_022116	Neo: - Age: -	ATP2B2	1.693	-	-	-	0.969	0.724	-	Mlig455_022116 {REF} {Length: 4646} {TRANSSPLICED} {Pfam: Cation transporting ATPase, C-terminus [PF00689.23, score=154.1]; E1-E2 ATPase [PF00122.22, score=109.1]; Cation transport ATPase (P-type) [PF13246.8, score=66.5]; haloacid dehalogenase-like hydrolase [PF00702.28, score=59.5]; Cation transporter/ATPase, N-terminus [PF00690.28, score=56.4]; Plasma membrane calcium transporter ATPase C terminal [PF12424.10, score=55.5]; haloacid dehalogenase-like hydrolase [PF08282.14, score=26.2]} {Human: ENSG00000157087, ATP2B2, ATPase plasma membrane Ca2+ transporting 2, [RH, Score=1271, Expect=0.0]; ENSG00000067842, ATP2B3, ATPase plasma membrane Ca2+ transporting 3, [RH, Score=1267, Expect=0.0]; ENSG00000058668, ATP2B4, ATPase plasma membrane Ca2+ transporting 4, [RH, Score=1241, Expect=0.0]; ENSG00000070961, ATP2B1, ATPase plasma membrane Ca2+ transporting 1, [RH, Score=1219, Expect=0.0]} {Mouse: ENSMUSG00000031376, Atp2b3, ATPase, Ca++ transporting, plasma membrane 3, [RH, Score=1263, Expect=0.0]; ENSMUSG00000030302, Atp2b2, ATPase, Ca++ transporting, plasma membrane 2, [RH, Score=1261, Expect=0.0]; ENSMUSG00000019943, Atp2b1, ATPase, Ca++ transporting, plasma membrane 1, [RH, Score=1229, Expect=0.0]; ENSMUSG00000026463, Atp2b4, ATPase, Ca++ transporting, plasma membrane 4, [RH, Score=1202, Expect=0.0]} {Dmel: FBgn0259214, PMCA, plasma membrane calcium ATPase, [RH, Score=1310, Expect=0.0]} {Celegans: WBGene00003153, mca-3, Calcium-transporting ATPase, [RH, Score=1270, Expect=0.0]} {Smed: dd_Smed_v6_4145_0_1, dd_Smed_v6_4145_0_1, [RH, Score=1351, Expect=0.0]} {RNA1509_15163, RNA1509_374, RNA1509_45766} {RNA1310_4479.2, RNA1509_15163, RNA1509_45766} {RNA1509_15163, RNA1509_45766, RNA815_368.1}
7.	MligTC455_24490	4954	103.2	Mlig455_053651	Neo: - Age: -	ATP2B2	0.968	-	-	-	0.968	-	-	Mlig455_053651 {REF} {Length: 4649} {TRANSSPLICED} {Pfam: Cation transporting ATPase, C-terminus [PF00689.23, score=150.9]; E1-E2 ATPase [PF00122.22, score=109.1]; Cation transport ATPase (P-type) [PF13246.8, score=67.7]; haloacid dehalogenase-like hydrolase [PF00702.28, score=59.0]; Cation transporter/ATPase, N-terminus [PF00690.28, score=56.4]; Plasma membrane calcium transporter ATPase C terminal [PF12424.10, score=55.3]; haloacid dehalogenase-like hydrolase [PF08282.14, score=26.4]} {Human: ENSG00000157087, ATP2B2, ATPase plasma membrane Ca2+ transporting 2, [RH, Score=1272, Expect=0.0]; ENSG00000067842, ATP2B3, ATPase plasma membrane Ca2+ transporting 3, [RH, Score=1266, Expect=0.0]; ENSG00000058668, ATP2B4, ATPase plasma membrane Ca2+ transporting 4, [RH, Score=1242, Expect=0.0]; ENSG00000070961, ATP2B1, ATPase plasma membrane Ca2+ transporting 1, [RH, Score=1220, Expect=0.0]} {Mouse: ENSMUSG00000031376, Atp2b3, ATPase, Ca++ transporting, plasma membrane 3, [RH, Score=1263, Expect=0.0]; ENSMUSG00000030302, Atp2b2, ATPase, Ca++ transporting, plasma membrane 2, [RH, Score=1262, Expect=0.0]; ENSMUSG00000019943, Atp2b1, ATPase, Ca++ transporting, plasma membrane 1, [RH, Score=1230, Expect=0.0]; ENSMUSG00000026463, Atp2b4, ATPase, Ca++ transporting, plasma membrane 4, [RH, Score=1204, Expect=0.0]} {Dmel: FBgn0259214, PMCA, plasma membrane calcium ATPase, [RH, Score=1311, Expect=0.0]} {Celegans: WBGene00003153, mca-3, Calcium-transporting ATPase, [RH, Score=1269, Expect=0.0]} {Smed: dd_Smed_v6_4145_0_1, dd_Smed_v6_4145_0_1, [RH, Score=1348, Expect=0.0]} {RNA1509_15679, RNA1509_19149, RNA1509_374, RNA1509_55618, RNA1509_59128} {RNA1310_4479.2, RNA1509_15679, RNA1509_19149, RNA1509_374, RNA1509_55618, RNA1509_59128} {RNA1509_15679, RNA1509_19149, RNA1509_374, RNA1509_55618, RNA1509_59128, RNA815_368.1}
8.	MligTC455_12179	1836	38.24	Mlig455_022912, Mlig455_022921	Neo: - Age: Up-Up-Down		0.952	-	-	-	0.952	-	-	Mlig455_022912 {REF} {Length: 4022} {TRANSSPLICED} {Pfam: PAN domain [PF00024.28, score=61.5]} {RNA1509_35320, RNA1509_963} {RNA1310_1843, RNA1509_35320, RNA1509_963} {RNA1509_35320, RNA1509_963, RNA815_613.1} Mlig455_022921 {REF} {Length: 4010} {TRANSSPLICED} {Pfam: PAN domain [PF00024.28, score=60.5]} {RNA1509_963} {RNA1310_1843} {RNA815_613.1}

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