TomoSeq data search

Data search

Results for MligTC455_29803

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29803

62

1.29

Mlig455_019229

Neo: Int S/G2/M

Age: Down-Up-Down, logFC(26M/2M)=3.334

SNRPE

Mlig455_019229 {REF} {Length: 546} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=56.6]} {Human: ENSG00000182004, SNRPE, small nuclear ribonucleoprotein polypeptide E, [RH, Score=129, Expect=2e-40]} {Mouse: ENSMUSG00000090553, Snrpe, small nuclear ribonucleoprotein E, [RH, Score=129, Expect=1e-40]} {Dmel: FBgn0261790, SmE, Small ribonucleoprotein particle protein SmE, [RH, Score=119, Expect=8e-37]} {Celegans: WBGene00004919, snr-6, Probable small nuclear ribonucleoprotein E, [RH, Score=117, Expect=7e-36]} {Smed: dd_Smed_v6_741_0_1, dd_Smed_v6_741_0_1, [RH, Score=116, Expect=8e-36]} {RNA1509_35291} {RNA1310_10583.1} {RNA815_32932}

Cumulative graph for MligTC455_29803

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.32	1.483	0.41151	1.00000
RegionR2	-0.998	1.483	0.98946	1.00000
RegionR3	0.381	1.483	0.71874	1.00000
RegionR4	3.155	1.483	0.00841	0.05361
RegionR5	2.15	1.483	0.01995	0.09692
RegionR6	0.335	1.483	0.75331	1.00000
RegionR7	0.126	1.483	0.84259	1.00000
RegionR8	-0.829	1.483	0.98422	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.148	1.483	1.00000	1.00000
RegenerationR2	-0.662	1.483	0.47311	0.85895
RegenerationR3	-0.215	1.483	0.81467	0.98621
RegenerationR4	-0.561	1.483	0.50702	0.87304
RegenerationR5	-0.668	1.483	0.33821	0.75654
RegenerationR6	0.893	1.483	0.37619	0.71818
RegenerationBL	0.848	1.483	0.53102	0.89081
RegenerationTP	-0.881	1.483	0.65274	0.99046

Genes with expression patterns similar to MligTC455_29803

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29803	62	1.29	Mlig455_019229	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=3.334	SNRPE	5	1.000	-	1.000	1.000	1.000	1.000	Mlig455_019229 {REF} {Length: 546} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=56.6]} {Human: ENSG00000182004, SNRPE, small nuclear ribonucleoprotein polypeptide E, [RH, Score=129, Expect=2e-40]} {Mouse: ENSMUSG00000090553, Snrpe, small nuclear ribonucleoprotein E, [RH, Score=129, Expect=1e-40]} {Dmel: FBgn0261790, SmE, Small ribonucleoprotein particle protein SmE, [RH, Score=119, Expect=8e-37]} {Celegans: WBGene00004919, snr-6, Probable small nuclear ribonucleoprotein E, [RH, Score=117, Expect=7e-36]} {Smed: dd_Smed_v6_741_0_1, dd_Smed_v6_741_0_1, [RH, Score=116, Expect=8e-36]} {RNA1509_35291} {RNA1310_10583.1} {RNA815_32932}
2.	MligTC455_30580	47	0.97	Mlig455_000123, Mlig455_063782	Neo: - Age: Up-Down-Up	SLC25A44	0.979	-	-	-	-	0.979	-	Mlig455_000123 {REF} {Length: 3661} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=150.1]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [RH, Score=216, Expect=7e-68]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [RH, Score=220, Expect=2e-69]} {Dmel: FBgn0039223, CG5805, [RH, Score=255, Expect=4e-83]} {Celegans: WBGene00008767, F13G3.7, [RH, Score=190, Expect=2e-57]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [RH, Score=280, Expect=2e-93]} {RNA1509_12802} {RNA1310_14951, RNA1509_12802} {RNA1509_12802, RNA815_6514} Mlig455_063782 {REF} {Length: 2137} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=118.6]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [Score=176, Expect=3e-52]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [Score=181, Expect=5e-54]} {Dmel: FBgn0039223, CG5805, [Score=216, Expect=1e-67]} {Celegans: WBGene00008767, F13G3.7, [Score=151, Expect=1e-42]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [Score=231, Expect=4e-74]} {RNA1509_12802} {RNA1310_14951} {RNA815_6514}
3.	MligTC455_28384	624	13	Mlig455_001026, Mlig455_064204, Mlig455_065672	Neo: - Age: logFC(26M/2M)=-2.523 Region-enriched R4: 4.217/0.01574		0.972	-	-	-	-	0.972	-	Mlig455_001026 {REF} {Length: 1611} {NoTransDecoderORF} {RNA1509_21483} {RNA1310_28030, RNA1509_21483} {RNA1509_21483, RNA815_50} Mlig455_064204 {REF} {Length: 1880} {NoTransDecoderORF} {RNA1509_21483} {RNA1310_28030} {RNA815_50} Mlig455_065672 {REF} {Length: 1169} {NoTransDecoderORF} {RNA1509_21483} {RNA1310_28030} {RNA815_50}
4.	MligTC455_25947	42	0.87	Mlig455_012640, Mlig455_012659	Neo: - Age: -		0.967	-	-	-	-	0.967	-	Mlig455_012640 {REF} {Length: 745} {NoTransDecoderORF} {RNA1310_44928} {RNA815_23085.1} Mlig455_012659 {REF} {Length: 745} {NoTransDecoderORF} {RNA1310_44928} {RNA815_23085.1}
5.	MligTC455_22268	6636	138.25	Mlig455_011760	Neo: - Age: logFC(26M/2M)=-0.323 Region-enriched R3: 1.908/0.00000 Region-enriched R6: 1.283/0.01830 Region-enriched R5: 1.133/0.00963		0.953	-	-	-	-	0.953	-	Mlig455_011760 {REF} {Length: 2561} {RNA1509_1433} {RNA1310_8428, RNA1509_1433} {RNA1509_1433, RNA815_2971}
6.	MligTC455_38061	112	2.33	Mlig455_003183, Mlig455_003385	Neo: - Age: Down-Up-Down Region-enriched R4: 3.963/0.00323 Region-enriched R3: 2.923/0.03513	SLC22A5	0.952	-	-	-	-	0.952	-	Mlig455_003183 {REF} {Length: 2030} {Pfam: Sugar (and other) transporter [PF00083.26, score=94.4]; Major Facilitator Superfamily [PF07690.18, score=79.2]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=251, Expect=1e-75]; ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=247, Expect=3e-74]} {Mouse: ENSMUSG00000020334, Slc22a4, solute carrier family 22 (organic cation transporter), member 4, [Score=250, Expect=1e-75]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=248, Expect=2e-74]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=272, Expect=3e-84]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=233, Expect=4e-69]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=211, Expect=3e-61]} {RNA1310_28487} {RNA815_52073} Mlig455_003385 {REF} {Length: 2374} {Pfam: Major Facilitator Superfamily [PF07690.18, score=37.9]; Sugar (and other) transporter [PF00083.26, score=28.3]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=113, Expect=5e-26]; ENSG00000197208, SLC22A4, solute carrier family 22 member 4, [Score=111, Expect=2e-25]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=110, Expect=2e-25]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=107, Expect=2e-24]; ENSMUSG00000020334, Slc22a4, solute carrier family 22 (organic cation transporter), member 4, [Score=105, Expect=7e-24]} {Dmel: FBgn0086365, Orct2, Organic cation transporter 2, [Score=134, Expect=1e-33]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=100, Expect=3e-22]} {RNA1310_28487} {RNA815_52073}

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