TomoSeq data search

Data search

Results for MligTC455_30580

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30580

47

0.97

Mlig455_000123, Mlig455_063782

Neo: -

Age: Up-Down-Up

SLC25A44

Mlig455_000123 {REF} {Length: 3661} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=150.1]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [RH, Score=216, Expect=7e-68]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [RH, Score=220, Expect=2e-69]} {Dmel: FBgn0039223, CG5805, [RH, Score=255, Expect=4e-83]} {Celegans: WBGene00008767, F13G3.7, [RH, Score=190, Expect=2e-57]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [RH, Score=280, Expect=2e-93]} {RNA1509_12802} {RNA1310_14951, RNA1509_12802} {RNA1509_12802, RNA815_6514}

Mlig455_063782 {REF} {Length: 2137} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=118.6]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [Score=176, Expect=3e-52]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [Score=181, Expect=5e-54]} {Dmel: FBgn0039223, CG5805, [Score=216, Expect=1e-67]} {Celegans: WBGene00008767, F13G3.7, [Score=151, Expect=1e-42]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [Score=231, Expect=4e-74]} {RNA1509_12802} {RNA1310_14951} {RNA815_6514}

Cumulative graph for MligTC455_30580

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-4.37	1.295	1.00000	1.00000
RegionR2	3.38	1.295	0.06558	0.31043
RegionR3	2.369	1.295	0.07598	0.48849
RegionR4	0.372	1.295	0.51861	0.84380
RegionR5	2.638	1.295	0.02454	0.11224
RegionR6	-1.464	1.295	0.99957	1.00000
RegionR7	-1.544	1.295	0.99962	1.00000
RegionR8	-1.381	1.295	0.99965	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	3.541	1.295	0.99992	1.00000
RegenerationR2	1.04	1.295	0.43158	0.83470
RegenerationR3	3.131	1.295	0.00768	0.16063
RegenerationR4	3.391	1.295	0.00676	0.11910
RegenerationR5	2.281	1.295	0.01337	0.20241
RegenerationR6	6.308	1.295	0.00032	0.01773
RegenerationBL	5.817	1.295	0.00719	0.08276
RegenerationTP	4.858	1.295	0.09463	0.48233

Genes with expression patterns similar to MligTC455_30580

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30580	47	0.97	Mlig455_000123, Mlig455_063782	Neo: - Age: Up-Down-Up	SLC25A44	3	1.000	-	-	-	1.000	1.000	Mlig455_000123 {REF} {Length: 3661} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=150.1]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [RH, Score=216, Expect=7e-68]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [RH, Score=220, Expect=2e-69]} {Dmel: FBgn0039223, CG5805, [RH, Score=255, Expect=4e-83]} {Celegans: WBGene00008767, F13G3.7, [RH, Score=190, Expect=2e-57]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [RH, Score=280, Expect=2e-93]} {RNA1509_12802} {RNA1310_14951, RNA1509_12802} {RNA1509_12802, RNA815_6514} Mlig455_063782 {REF} {Length: 2137} {TRANSSPLICED} {Pfam: Mitochondrial carrier protein [PF00153.29, score=118.6]} {Human: ENSG00000160785, SLC25A44, solute carrier family 25 member 44, [Score=176, Expect=3e-52]} {Mouse: ENSMUSG00000050144, Slc25a44, solute carrier family 25, member 44, [Score=181, Expect=5e-54]} {Dmel: FBgn0039223, CG5805, [Score=216, Expect=1e-67]} {Celegans: WBGene00008767, F13G3.7, [Score=151, Expect=1e-42]} {Smed: dd_Smed_v6_8650_0_2, dd_Smed_v6_8650_0_2, [Score=231, Expect=4e-74]} {RNA1509_12802} {RNA1310_14951} {RNA815_6514}
2.	MligTC455_29803	62	1.29	Mlig455_019229	Neo: Int S/G2/M Age: Down-Up-Down, logFC(26M/2M)=3.334	SNRPE	0.979	-	-	-	-	0.979	-	Mlig455_019229 {REF} {Length: 546} {TRANSSPLICED} {Pfam: LSM domain [PF01423.24, score=56.6]} {Human: ENSG00000182004, SNRPE, small nuclear ribonucleoprotein polypeptide E, [RH, Score=129, Expect=2e-40]} {Mouse: ENSMUSG00000090553, Snrpe, small nuclear ribonucleoprotein E, [RH, Score=129, Expect=1e-40]} {Dmel: FBgn0261790, SmE, Small ribonucleoprotein particle protein SmE, [RH, Score=119, Expect=8e-37]} {Celegans: WBGene00004919, snr-6, Probable small nuclear ribonucleoprotein E, [RH, Score=117, Expect=7e-36]} {Smed: dd_Smed_v6_741_0_1, dd_Smed_v6_741_0_1, [RH, Score=116, Expect=8e-36]} {RNA1509_35291} {RNA1310_10583.1} {RNA815_32932}
3.	MligTC455_24764	207	4.31	Mlig455_049092	Neo: Irradiation Age: -	MCM9	0.968	-	-	-	-	-	0.968	Mlig455_049092 {REF} {Length: 5890} {TRANSSPLICED} {Pfam: MCM P-loop domain [PF00493.25, score=247.6]; MCM OB domain [PF17207.5, score=79.4]; MCM AAA-lid domain [PF17855.3, score=60.0]; Magnesium chelatase, subunit ChlI [PF01078.23, score=29.2]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.5]} {Human: ENSG00000111877, MCM9, minichromosome maintenance 9 homologous recombination repair factor, [RH, Score=551, Expect=4e-172]} {Mouse: ENSMUSG00000058298, Mcm9, minichromosome maintenance 9 homologous recombination repair factor, [RH, Score=556, Expect=1e-172]} {Dmel: FBgn0014861, Mcm2, Minichromosome maintenance 2, [Score=265, Expect=1e-73]} {Celegans: WBGene00003154, mcm-2, Yeast MCM (Licensing factor) related, [Score=249, Expect=2e-68]} {Smed: dd_Smed_v6_18101_0_1, dd_Smed_v6_18101_0_1, [RH, Score=435, Expect=4e-136]} {RNA1509_37511, RNA1509_48203} {RNA1310_3712.1, RNA1509_48203} {RNA1509_48203, RNA815_6575.1}
4.	MligTC455_27659	84	1.74	Mlig455_018407	Neo: - Age: -		0.959	-	-	-	-	-	0.959	Mlig455_018407 {REF} {Length: 1746} {NoTransDecoderORF} {RNA1509_40699} {RNA1310_17673.2} {RNA815_24644.1}
5.	MligTC455_36578	5214	108.63	Mlig455_043909	Neo: Int S/G2/M Age: - Regeneration-enriched BL: 1.402 Regeneration-enriched R6: 1.085	PSMC6	0.959	-	-	-	-	-	0.959	Mlig455_043909 {REF} {Length: 2375} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=145.5]; AAA+ lid domain [PF17862.3, score=45.2]; Proteasomal ATPase OB C-terminal domain [PF16450.7, score=34.2]; AAA ATPase domain [PF13191.8, score=33.6]; AAA domain (dynein-related subfamily) [PF07728.16, score=27.7]; AAA domain (Cdc48 subfamily) [PF07724.16, score=26.9]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=24.3]; AAA domain [PF13401.8, score=20.5]} {Human: ENSG00000100519, PSMC6, proteasome 26S subunit, ATPase 6, [RH, Score=683, Expect=0.0]} {Mouse: ENSMUSG00000021832, Psmc6, proteasome (prosome, macropain) 26S subunit, ATPase, 6, [RH, Score=683, Expect=0.0]} {Dmel: FBgn0028685, Rpt4, Regulatory particle triple-A ATPase 4, [RH, Score=684, Expect=0.0]} {Celegans: WBGene00004504, rpt-4, Probable 26S protease regulatory subunit 10B, [RH, Score=655, Expect=0.0]} {Smed: dd_Smed_v6_2133_0_1, dd_Smed_v6_2133_0_1, [RH, Score=697, Expect=0.0]} {RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1310_14071, RNA1509_12298, RNA1509_1468, RNA1509_15727} {RNA1509_12298, RNA1509_1468, RNA1509_15727, RNA815_6834}
6.	MligTC455_37453	58	1.21	Mlig455_061545	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_061545 {REF} {Length: 4478} {RNA1509_50803} {RNA1310_4798.1} {RNA815_2540.1}
7.	MligTC455_39569	194	4.05	Mlig455_006055, Mlig455_028715	Neo: Int S/G2/M Age: -	ZAN	0.958	-	-	-	-	-	0.958	Mlig455_006055 {REF} {Length: 1262} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=61.5]} {RNA1310_85984} Mlig455_028715 {REF} {Length: 4529} {Pfam: SH2 domain [PF00017.26, score=22.0]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=60.1, Expect=2e-08]} {RNA1509_15981} {RNA1310_15741} {RNA815_13643}
8.	MligTC455_18557	504	10.5	Mlig455_050784	Neo: Int S/G2/M Age: -	FBXO9	0.956	-	-	-	-	0.956	-	Mlig455_050784 {REF} {Length: 2422} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=32.7]; F-box only protein C-terminal region [PF19270.1, score=32.4]} {Human: ENSG00000112146, FBXO9, F-box protein 9, [RH, Score=104, Expect=1e-23]} {Mouse: ENSMUSG00000001366, Fbxo9, f-box protein 9, [RH, Score=100, Expect=2e-22]} {Dmel: FBgn0038056, CG5961, [RH, Score=98.2, Expect=7e-22]} {Smed: dd_Smed_v6_3570_0_1, dd_Smed_v6_3570_0_1, [RH, Score=87.8, Expect=9e-19]} {RNA1509_21307, RNA1509_29511, RNA1509_33225, RNA1509_54421} {RNA1310_18421.1, RNA1509_21307, RNA1509_29511, RNA1509_33225, RNA1509_54421} {RNA1509_21307, RNA1509_29511, RNA1509_33225, RNA1509_54421, RNA815_1191}
9.	MligTC455_41709	447	9.31	Mlig455_000628	Neo: - Age: logFC(26M/2M)=-0.245 Region-enriched R3: 2.422/0.00023 Region-enriched R4: 1.999/0.01870 Region-enriched R5: 1.622/0.02134 Regeneration-upregulated R6: 1.751 Regeneration-enriched R6: 1.751	ECEL1	0.956	-	-	-	-	0.956	-	Mlig455_000628 {REF} {Length: 2950} {Pfam: Peptidase family M13 [PF05649.15, score=180.2]; Peptidase family M13 [PF01431.23, score=82.8]} {Human: ENSG00000171551, ECEL1, endothelin converting enzyme like 1, [Score=199, Expect=3e-53]; ENSG00000117298, ECE1, endothelin converting enzyme 1, [Score=191, Expect=2e-50]} {Mouse: ENSMUSG00000026247, Ecel1, endothelin converting enzyme-like 1, [Score=196, Expect=2e-52]; ENSMUSG00000057530, Ece1, endothelin converting enzyme 1, [Score=192, Expect=3e-51]; ENSMUSG00000115293, Gm49333, predicted gene, 49333, [Score=190, Expect=5e-50]; ENSMUSG00000058183, Mmel1, membrane metallo-endopeptidase-like 1, [Score=190, Expect=2e-50]; ENSMUSG00000022842, Ece2, endothelin converting enzyme 2, [Score=190, Expect=2e-50]} {Dmel: FBgn0031081, Nep3, Neprilysin 3, [Score=167, Expect=7e-43]} {Celegans: WBGene00020230, nep-2, Neprilysin-2, [Score=167, Expect=3e-43]} {Smed: dd_Smed_v6_8276_0_1, dd_Smed_v6_8276_0_1, [Score=145, Expect=4e-36]} {RNA1509_18065, RNA1509_31044, RNA1509_36662, RNA1509_39995, RNA1509_57852} {RNA1310_6679, RNA1509_18065, RNA1509_31044, RNA1509_36662, RNA1509_39995, RNA1509_57852} {RNA1509_18065, RNA1509_31044, RNA1509_36662, RNA1509_39995, RNA1509_57852, RNA815_2057}
10.	MligTC455_19658	99	2.05	Mlig455_019799	Neo: - Age: -	ENDOG	0.955	-	-	-	-	-	0.955	Mlig455_019799 {REF} {Length: 565} {Pfam: DNA/RNA non-specific endonuclease [PF01223.25, score=81.3]} {Human: ENSG00000167136, ENDOG, endonuclease G, [Score=122, Expect=2e-34]} {Mouse: ENSMUSG00000015337, Endog, endonuclease G, [Score=123, Expect=5e-35]} {Dmel: FBgn0033690, EndoG, Endonuclease G, [Score=132, Expect=2e-38]} {Celegans: WBGene00000787, cps-6, Endonuclease G, mitochondrial, [Score=117, Expect=8e-33]} {Smed: dd_Smed_v6_14758_0_1, dd_Smed_v6_14758_0_1, [Score=123, Expect=2e-35]} {RNA1509_48918} {RNA1310_33080} {RNA815_16080}
11.	MligTC455_36458	468	9.75	Mlig455_041237	Neo: - Age: -	RNF31	0.953	-	-	-	-	-	0.953	Mlig455_041237 {REF} {Length: 4269} {TRANSSPLICED} {Pfam: E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=42.5]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=111, Expect=4e-24]; ENSG00000285152, RNF31, ring finger protein 31, [Score=111, Expect=4e-24]; ENSG00000259529, AL136295.5, novel transcript, [Score=109, Expect=4e-24]; ENSG00000284845, AL136295.10, novel transcript, [Score=109, Expect=4e-24]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=112, Expect=9e-25]} {Dmel: FBgn0085446, CG34417, [Score=82.8, Expect=1e-15]} {RNA1509_19319, RNA1509_20702, RNA1509_24854, RNA1509_32163, RNA1509_33237, RNA1509_36618, RNA1509_39561, RNA1509_41517, RNA1509_53033} {RNA1310_6690, RNA1509_19319, RNA1509_20702, RNA1509_24854, RNA1509_32163, RNA1509_33237, RNA1509_36618, RNA1509_39561, RNA1509_41517, RNA1509_53033} {RNA1509_19319, RNA1509_20702, RNA1509_24854, RNA1509_32163, RNA1509_33237, RNA1509_36618, RNA1509_39561, RNA1509_41517, RNA1509_53033, RNA815_6553.1}
12.	MligTC455_43099	279	5.81	Mlig455_040231	Neo: Int S/G2/M Age: Down-Up-Down Region-enriched R5: 1.572/0.00243	ANAPC11	0.951	-	-	-	-	0.951	-	Mlig455_040231 {REF} {Length: 1837} {TRANSSPLICED} {Pfam: Anaphase-promoting complex subunit 11 RING-H2 finger [PF12861.9, score=135.1]; RING-H2 zinc finger domain [PF12678.9, score=80.4]; Ring finger domain [PF13639.8, score=32.0]} {Human: ENSG00000141552, ANAPC11, anaphase promoting complex subunit 11, [RH, Score=134, Expect=3e-42]} {Mouse: ENSMUSG00000025135, Anapc11, anaphase promoting complex subunit 11, [RH, Score=136, Expect=4e-43]} {Dmel: FBgn0250903, lmgA, lemming A, [RH, Score=136, Expect=3e-43]} {Celegans: WBGene00000145, apc-11, Anaphase-promoting complex subunit 11, [RH, Score=99.4, Expect=4e-28]} {Smed: dd_Smed_v6_3468_1_1, dd_Smed_v6_3468_1_1, [RH, Score=65.1, Expect=1e-15]} {RNA1509_23435} {RNA1310_20665, RNA1509_23435} {RNA1509_23435, RNA815_22424.1}
13.	MligTC455_25947	42	0.87	Mlig455_012640, Mlig455_012659	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_012640 {REF} {Length: 745} {NoTransDecoderORF} {RNA1310_44928} {RNA815_23085.1} Mlig455_012659 {REF} {Length: 745} {NoTransDecoderORF} {RNA1310_44928} {RNA815_23085.1}
14.	MligTC455_53301	124	2.59	Mlig455_045526, Mlig455_065717	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.551	BNC2	0.95	-	-	-	-	-	0.950	Mlig455_045526 {REF} {Length: 3532} {Human: ENSG00000173068, BNC2, basonuclin 2, [RH, Score=195, Expect=5e-51]} {Mouse: ENSMUSG00000028487, Bnc2, basonuclin 2, [RH, Score=195, Expect=4e-51]} {Dmel: FBgn0285879, disco-r, disco-related, [RH, Score=102, Expect=1e-21]} {Celegans: WBGene00044791, bnc-1, BasoNuClin-1 zinc finger protein homolog, [RH, Score=80.1, Expect=8e-17]} {Smed: dd_Smed_v6_18947_0_1, dd_Smed_v6_18947_0_1, [RH, Score=160, Expect=1e-41]} {RNA1310_47662} {RNA815_36499} Mlig455_065717 {REF} {Length: 3299} {Human: ENSG00000173068, BNC2, basonuclin 2, [RH, Score=197, Expect=1e-51]} {Mouse: ENSMUSG00000028487, Bnc2, basonuclin 2, [RH, Score=198, Expect=7e-52]} {Dmel: FBgn0285879, disco-r, disco-related, [RH, Score=102, Expect=1e-21]} {Celegans: WBGene00044791, bnc-1, BasoNuClin-1 zinc finger protein homolog, [RH, Score=79.7, Expect=1e-16]} {Smed: dd_Smed_v6_18947_0_1, dd_Smed_v6_18947_0_1, [RH, Score=161, Expect=6e-42]} {RNA1310_47662} {RNA815_36499}

Berezikov Lab - 2020-2021 © ERIBA