M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_29820

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29820 851 17.74 Mlig455_044549

Neo: -

Age: -

 Mlig455_044549 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4139) [PF13598.8, score=141.2]; N-terminal domain of unknown function (DUF4140) [PF13600.8, score=74.2]} {Celegans: WBGene00016877, C52D10.3, [RH, Score=256, Expect=3e-76]} {Smed: dd_Smed_v6_3629_0_3, dd_Smed_v6_3629_0_3, [RH, Score=422, Expect=4e-140]} {RNA1509_3204} {RNA1310_1539.2} {RNA815_467.1}

Cumulative graph for MligTC455_29820

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.359 4.355 0.71450 1.00000
RegionR2 0.255 4.355 0.57153 0.93083
RegionR3 -0.31 4.355 0.42757 0.94855
RegionR4 -0.181 4.355 0.70367 0.99167
RegionR5 -0.815 4.355 0.03679 0.15003
RegionR6 -0.091 4.355 0.81707 1.00000
RegionR7 0.552 4.355 0.22629 0.84703
RegionR8 0.231 4.355 0.70798 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.13 4.355 0.18666 0.92717
RegenerationR2 -0.415 4.355 0.31145 0.75143
RegenerationR3 -0.136 4.355 0.76493 0.96945
RegenerationR4 -0.296 4.355 0.53329 0.88555
RegenerationR5 0.42 4.355 0.34508 0.76069
RegenerationR6 -0.042 4.355 0.92646 1.00000
RegenerationBL -0.176 4.355 0.72504 1.00000
RegenerationTP -0.211 4.355 0.69039 1.00000


Genes with expression patterns similar to MligTC455_29820

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29820 851 17.74 Mlig455_044549

Neo: -

Age: -

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_044549 {REF} {Length: 4558} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4139) [PF13598.8, score=141.2]; N-terminal domain of unknown function (DUF4140) [PF13600.8, score=74.2]} {Celegans: WBGene00016877, C52D10.3, [RH, Score=256, Expect=3e-76]} {Smed: dd_Smed_v6_3629_0_3, dd_Smed_v6_3629_0_3, [RH, Score=422, Expect=4e-140]} {RNA1509_3204} {RNA1310_1539.2} {RNA815_467.1}
2. MligTC455_42635 954 19.87 Mlig455_030108

Neo: -

Age: Up-Down-Down

Region-enriched R7: 1.190/0.04708

 2.731 - 0.871 - 0.907 0.953 - Mlig455_030108 {REF} {Length: 2836} {RNA1509_11143, RNA1509_30496, RNA1509_34855, RNA1509_56742} {RNA1310_141.1, RNA1509_11143, RNA1509_30496, RNA1509_34855, RNA1509_56742} {RNA1509_11143, RNA1509_30496, RNA1509_34855, RNA1509_56742, RNA815_8041.1}
3. MligTC455_35878 750 15.63 Mlig455_034777

Neo: -

Age: -

 DSCAML1 2.434 - - 0.773 0.952 0.709 - Mlig455_034777 {REF} {Length: 7967} {Pfam: Immunoglobulin domain [PF13927.8, score=115.3]; Fibronectin type III domain [PF00041.23, score=102.0]; Immunoglobulin I-set domain [PF07679.18, score=67.0]; Immunoglobulin domain [PF13895.8, score=56.3]; Immunoglobulin V-set domain [PF07686.19, score=43.7]; Immunoglobulin domain [PF00047.27, score=35.4]} {Human: ENSG00000177103, DSCAML1, DS cell adhesion molecule like 1, [Score=136, Expect=3e-31]} {Mouse: ENSMUSG00000032087, Dscaml1, DS cell adhesion molecule like 1, [Score=136, Expect=3e-31]} {Dmel: FBgn0263219, Dscam4, Down syndrome cell adhesion molecule 4, [Score=116, Expect=2e-25]} {Celegans: WBGene00004371, rig-4, Protein sidekick homolog, [Score=84.7, Expect=9e-16]} {Smed: dd_Smed_v6_3024_0_1, dd_Smed_v6_3024_0_1, [Score=252, Expect=6e-67]} {RNA1509_14715, RNA1509_17640, RNA1509_44798} {RNA1310_789, RNA1509_14715, RNA1509_17640, RNA1509_44798} {RNA1509_14715, RNA1509_17640, RNA1509_44798, RNA815_11499}
4. MligTC455_15942 908 18.92 Mlig455_035020, Mlig455_053446

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.273

 NR1I2 1.731 - - - 0.961 0.770 -

Mlig455_035020 {REF} {Length: 4424} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.8]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=87.4, Expect=1e-17]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=84.3, Expect=6e-17]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=81.3, Expect=6e-16]} {Dmel: FBgn0003720, tll, tailless, [Score=82.0, Expect=3e-16]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=99.4, Expect=2e-21]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=91.3, Expect=3e-19]} {RNA1509_8358} {RNA1310_9876} {RNA815_22592}

Mlig455_053446 {REF} {Length: 4372} {Pfam: Zinc finger, C4 type (two domains) [PF00105.20, score=73.7]} {Human: ENSG00000144852, NR1I2, nuclear receptor subfamily 1 group I member 2, [Score=87.0, Expect=2e-17]} {Mouse: ENSMUSG00000022809, Nr1i2, nuclear receptor subfamily 1, group I, member 2, [Score=84.0, Expect=9e-17]; ENSMUSG00000022479, Vdr, vitamin D (1,25-dihydroxyvitamin D3) receptor, [Score=80.9, Expect=8e-16]; ENSMUSG00000002393, Nr2f6, nuclear receptor subfamily 2, group F, member 6, [Score=80.1, Expect=1e-15]} {Dmel: FBgn0003720, tll, tailless, [Score=82.4, Expect=3e-16]} {Celegans: WBGene00000908, daf-12, Nuclear hormone receptor family member daf-12, [Score=99.8, Expect=1e-21]} {Smed: dd_Smed_v6_5200_0_1, dd_Smed_v6_5200_0_1, [Score=91.3, Expect=2e-19]} {RNA1509_8358} {RNA1310_9876} {RNA815_22592}
5. MligTC455_39099 2631 54.81 Mlig455_057941, Mlig455_057974, Mlig455_070742

Neo: -

Age: logFC(26M/2M)=-0.384

Region-enriched R4: 1.433/0.02316

 SLIT3 1.67 - 0.715 - 0.955 - -

Mlig455_057941 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323}

Mlig455_057974 {REF} {Length: 4420} {Pfam: Leucine rich repeat [PF13855.8, score=54.4]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.0]; Leucine Rich Repeat [PF00560.35, score=20.6]; Leucine-rich repeat [PF14580.8, score=19.0]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.0, Expect=3e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.1, Expect=9e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=63.9, Expect=5e-10]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.8, Expect=3e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=5e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=4e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=118, Expect=3e-28]} {RNA1509_8042} {RNA1310_9830} {RNA815_3323}

Mlig455_070742 {REF} {Length: 4437} {Pfam: Leucine rich repeat [PF13855.8, score=54.9]; Leucine Rich repeats (2 copies) [PF12799.9, score=30.6]; Leucine Rich Repeat [PF00560.35, score=21.4]; Leucine-rich repeat [PF14580.8, score=19.3]} {Human: ENSG00000184347, SLIT3, slit guidance ligand 3, [Score=62.4, Expect=2e-09]; ENSG00000156564, LRFN2, leucine rich repeat and fibronectin type III domain containing 2, [Score=60.5, Expect=6e-09]} {Mouse: ENSMUSG00000056427, Slit3, slit guidance ligand 3, [Score=64.3, Expect=3e-10]; ENSMUSG00000036334, Igsf10, immunoglobulin superfamily, member 10, [Score=61.2, Expect=3e-09]; ENSMUSG00000040490, Lrfn2, leucine rich repeat and fibronectin type III domain containing 2, [Score=61.2, Expect=2e-09]} {Dmel: FBgn0023095, caps, capricious, [Score=56.6, Expect=4e-08]} {Celegans: WBGene00020693, lron-8, ELRR (Extracellular Leucine-Rich Repeat) ONly, [Score=49.7, Expect=3e-06]} {Smed: dd_Smed_v6_13558_0_1, dd_Smed_v6_13558_0_1, [Score=116, Expect=1e-27]} {RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1310_9830, RNA1509_17236, RNA1509_20558, RNA1509_8042} {RNA1509_17236, RNA1509_20558, RNA1509_8042, RNA815_3323}
6. MligTC455_23405 1199 24.97 Mlig455_019205

Neo: -

Age: -

 ADAMTSL1 0.975 - - - 0.975 - - Mlig455_019205 {REF} {Length: 3744} {TRANSSPLICED} {Pfam: Thrombospondin type 1 domain [PF19030.2, score=110.2]; Thrombospondin type 1 domain [PF00090.21, score=28.8]; Immunoglobulin domain [PF13927.8, score=24.4]; PLAC (protease and lacunin) domain [PF08686.13, score=21.3]} {Human: ENSG00000178031, ADAMTSL1, ADAMTS like 1, [RH, Score=114, Expect=3e-25]} {Mouse: ENSMUSG00000066113, Adamtsl1, ADAMTS-like 1, [RH, Score=113, Expect=4e-25]} {Dmel: FBgn0051619, nolo, no long nerve cord, [RH, Score=100, Expect=3e-21]} {Celegans: WBGene00009958, madd-4, [RH, Score=167, Expect=4e-43]} {Smed: dd_Smed_v6_6962_0_1, dd_Smed_v6_6962_0_1, [RH, Score=184, Expect=6e-50]} {RNA1509_4750} {RNA1310_2104.1, RNA1509_4750} {RNA1509_4750, RNA815_1856.1}
7. MligTC455_45394 1156 24.08 Mlig455_009723

Neo: -

Age: -

 DLC1 0.969 - - - 0.969 - - Mlig455_009723 {REF} {Length: 4644} {Pfam: RhoGAP domain [PF00620.29, score=114.0]; START domain [PF01852.21, score=58.1]} {Human: ENSG00000285265, DLC1, DLC1 Rho GTPase activating protein, [Score=337, Expect=8e-99]; ENSG00000164741, DLC1, DLC1 Rho GTPase activating protein, [Score=337, Expect=1e-96]; ENSG00000133121, STARD13, StAR related lipid transfer domain containing 13, [Score=326, Expect=3e-95]} {Mouse: ENSMUSG00000016128, Stard13, StAR-related lipid transfer (START) domain containing 13, [Score=333, Expect=7e-98]; ENSMUSG00000031523, Dlc1, deleted in liver cancer 1, [Score=331, Expect=1e-94]} {Dmel: FBgn0285955, cv-c, crossveinless c, [Score=277, Expect=4e-78]} {Celegans: WBGene00001559, gei-1, GEX Interacting protein, [Score=196, Expect=6e-51]} {Smed: dd_Smed_v6_9530_0_2, dd_Smed_v6_9530_0_2, [Score=305, Expect=1e-88]} {RNA1509_22275, RNA1509_9216} {RNA1310_3779, RNA1509_22275} {RNA1509_22275, RNA815_16531}
8. MligTC455_16590 909 18.95 Mlig455_051504, Mlig455_051541

Neo: -

Age: -

 ONECUT1 0.966 - - - 0.966 - -

Mlig455_051504 {REF} {Length: 4615} {Pfam: Homeodomain [PF00046.31, score=42.5]; Homeobox KN domain [PF05920.13, score=20.3]} {Human: ENSG00000169856, ONECUT1, one cut homeobox 1, [Score=144, Expect=2e-39]} {Mouse: ENSMUSG00000043013, Onecut1, one cut domain, family member 1, [Score=144, Expect=7e-40]} {Dmel: FBgn0028996, onecut, [Score=140, Expect=2e-37]} {Celegans: WBGene00015934, ceh-48, One cut domain family member, [Score=114, Expect=4e-29]} {Smed: dd_Smed_v6_16472_0_1, dd_Smed_v6_16472_0_1, [Score=140, Expect=1e-37]} {RNA1509_10654} {RNA1310_2337.1, RNA1509_10654} {RNA1509_10654, RNA815_7905}

Mlig455_051541 {REF} {Length: 3687} {Pfam: CUT domain [PF02376.17, score=114.0]; Homeodomain [PF00046.31, score=40.3]; Homeobox KN domain [PF05920.13, score=19.5]} {Human: ENSG00000169856, ONECUT1, one cut homeobox 1, [RH, Score=262, Expect=1e-81]; ENSG00000119547, ONECUT2, one cut homeobox 2, [RH, Score=253, Expect=1e-77]} {Mouse: ENSMUSG00000043013, Onecut1, one cut domain, family member 1, [RH, Score=263, Expect=4e-82]; ENSMUSG00000045991, Onecut2, one cut domain, family member 2, [RH, Score=253, Expect=5e-78]} {Dmel: FBgn0028996, onecut, [RH, Score=265, Expect=4e-78]} {Celegans: WBGene00015934, ceh-48, One cut domain family member, [RH, Score=232, Expect=1e-70]} {Smed: dd_Smed_v6_16472_0_1, dd_Smed_v6_16472_0_1, [RH, Score=275, Expect=1e-83]} {RNA1509_10654} {RNA1310_2337.1} {RNA815_21352}
9. MligTC455_52565 271 5.65 Mlig455_026362

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=1.320

 0.964 - - - - 0.964 - Mlig455_026362 {REF} {Length: 1068} {NoTransDecoderORF} {RNA1509_33925} {RNA1310_12230.1} {RNA815_46685}
10. MligTC455_17952 858 17.88 Mlig455_019484, Mlig455_060545

Neo: -

Age: -

 0.96 - - - 0.960 - -

Mlig455_019484 {REF} {Length: 4698} {TRANSSPLICED} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_4363, RNA1509_50959} {RNA1310_1338, RNA1509_50959} {RNA1509_50959, RNA815_4509}

Mlig455_060545 {REF} {Length: 4765} {Dmel: FBgn0261934, dikar, [Score=51.2, Expect=8e-06]} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [RH, Score=100, Expect=2e-21]} {RNA1509_4363} {RNA1310_1338} {RNA815_4509}
11. MligTC455_35352 1664 34.67 Mlig455_067185

Neo: -

Age: -

Region-enriched R2: 1.216/0.01510

Regeneration-downregulated R6: -1.685

Regeneration-depleted R6: -1.685

 AF241726.2 0.96 - 0.960 - - - - Mlig455_067185 {REF} {Length: 1953} {Pfam: Tetraspanin family [PF00335.22, score=79.0]} {Human: ENSG00000250349, AF241726.2, novel proline rich Gla (G-carboxyglutamic acid) 1 (PRRG1) and tetraspanin 7 (TSPAN7) protein, [Score=60.5, Expect=6e-10]; ENSG00000156298, TSPAN7, tetraspanin 7, [Score=60.1, Expect=7e-10]} {Mouse: ENSMUSG00000067377, Tspan6, tetraspanin 6, [Score=61.2, Expect=2e-10]} {Dmel: FBgn0033129, Tsp42Eh, Tetraspanin 42Eh, [Score=45.8, Expect=1e-05]} {Smed: dd_Smed_v6_3175_0_1, dd_Smed_v6_3175_0_1, [Score=100, Expect=2e-24]} {RNA1509_46723, RNA1509_52812} {RNA1310_15363, RNA1509_46723, RNA1509_52812} {RNA1509_46723, RNA1509_52812, RNA815_5523}
12. MligTC455_44853 1650 34.37 Mlig455_022026

Neo: -

Age: -

Regeneration-downregulated BL: -1.608

Regeneration-depleted BL: -1.608

 RNF217 0.96 - - - - 0.960 - Mlig455_022026 {REF} {Length: 2698} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=56.5]} {Human: ENSG00000146373, RNF217, ring finger protein 217, [Score=171, Expect=7e-46]} {Mouse: ENSMUSG00000063760, Rnf217, ring finger protein 217, [Score=169, Expect=2e-45]} {Dmel: FBgn0025186, ari-2, ariadne 2, [Score=73.2, Expect=3e-13]} {Celegans: WBGene00013270, Y57A10A.31, [Score=78.6, Expect=7e-15]} {Smed: dd_Smed_v6_7110_0_1, dd_Smed_v6_7110_0_1, [Score=135, Expect=2e-33]} {RNA1509_4132} {RNA1310_7549, RNA1509_4132} {RNA1509_4132, RNA815_2398.1}
13. MligTC455_27956 372 7.75 Mlig455_001348, Mlig455_004814, Mlig455_017672, Mlig455_039228, Mlig455_046389, Mlig455_061106, Mlig455_061554

Neo: -

Age: Down-Up-Down

 0.959 - - - - 0.959 -

Mlig455_001348 {REF} {Length: 109} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_34957}

Mlig455_004814 {REF} {Length: 1314} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_17474} {RNA815_34916}

Mlig455_017672 {REF} {Length: 189} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}

Mlig455_039228 {REF} {Length: 370} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_47679} {RNA815_42452}

Mlig455_046389 {REF} {Length: 206} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}

Mlig455_061106 {REF} {Length: 529} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_4200.3}

Mlig455_061554 {REF} {Length: 861} {NoTransDecoderORF} {RNA1509_6383} {RNA1310_31653} {RNA815_42452}
14. MligTC455_37128 155 3.22 Mlig455_066474, Mlig455_066476

Neo: -

Age: -

 0.958 - - - 0.958 - -

Mlig455_066474 {REF} {Length: 669} {Celegans: WBGene00022511, ZC53.4, [Score=68.6, Expect=3e-15]} {Smed: dd_Smed_v6_9974_1_2, dd_Smed_v6_9974_1_2, [Score=55.8, Expect=8e-11]} {RNA1509_53241} {RNA1310_47825} {RNA815_1671.1}

Mlig455_066476 {REF} {Length: 7427} {Pfam: Coilin N-terminus [PF15862.7, score=22.6]} {RNA1509_23774} {RNA1310_17710.2} {RNA815_1857}
15. MligTC455_46765 267 5.56 Mlig455_043948

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.779

 ABCG2 0.957 - - - - 0.957 - Mlig455_043948 {REF} {Length: 3252} {Pfam: ABC transporter [PF00005.29, score=103.6]; ABC-2 type transporter [PF01061.26, score=92.9]; ABC-2 type transporter [PF19055.2, score=36.2]; AAA domain, putative AbiEii toxin, Type IV TA system [PF13304.8, score=27.2]; RecF/RecN/SMC N terminal domain [PF02463.21, score=18.9]} {Human: ENSG00000118777, ABCG2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=236, Expect=2e-68]} {Mouse: ENSMUSG00000029802, Abcg2, ATP binding cassette subfamily G member 2 (Junior blood group), [Score=234, Expect=1e-67]; ENSMUSG00000032131, Abcg4, ATP binding cassette subfamily G member 4, [Score=227, Expect=4e-65]} {Dmel: FBgn0020445, E23, Early gene at 23, [Score=353, Expect=2e-109]} {Celegans: WBGene00015479, wht-1, ABC transporter ATP-binding protein/permease wht-1, [Score=239, Expect=2e-70]} {Smed: dd_Smed_v6_4081_0_1, dd_Smed_v6_4081_0_1, [Score=215, Expect=9e-61]} {RNA1509_16342, RNA1509_52642} {RNA1310_2668.1, RNA1509_16342} {RNA1509_16342, RNA815_2541}
16. MligTC455_17953 432 9 Mlig455_066894

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_066894 {REF} {Length: 4710} {TRANSSPLICED} {Smed: dd_Smed_v6_9197_0_1, dd_Smed_v6_9197_0_1, [Score=49.3, Expect=1e-05]} {RNA1509_4363} {RNA1310_1338} {RNA815_4509}
17. MligTC455_17256 2285 47.61 Mlig455_013837, Mlig455_059934

Neo: -

Age: logFC(26M/2M)=0.367

 0.953 - - - - 0.953 -

Mlig455_013837 {REF} {Length: 4041} {TRANSSPLICED} {Pfam: MAM domain, meprin/A5/mu [PF00629.25, score=51.2]} {Smed: dd_Smed_v6_1725_0_1, dd_Smed_v6_1725_0_1, [Score=105, Expect=1e-23]} {RNA1509_12221} {RNA1310_15564} {RNA815_6145}

Mlig455_059934 {REF} {Length: 3197} {Pfam: Family of unknown function (DUF6479) [PF20087.1, score=22.6]} {Smed: dd_Smed_v6_1725_0_1, dd_Smed_v6_1725_0_1, [Score=78.6, Expect=6e-17]} {RNA1509_12221} {RNA1310_15564} {RNA815_6145}
18. MligTC455_27784 357 7.44 Mlig455_058367

Neo: -

Age: Down-Up-Down

 PAK3 0.953 - - - 0.953 - - Mlig455_058367 {REF} {Length: 3790} {Pfam: Protein kinase domain [PF00069.27, score=237.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=162.0]; P21-Rho-binding domain [PF00786.30, score=34.0]; ABC1 atypical kinase-like domain [PF03109.18, score=25.7]; Kinase-like [PF14531.8, score=23.8]; Fungal protein kinase [PF17667.3, score=22.8]; Phosphotransferase enzyme family [PF01636.25, score=20.3]} {Human: ENSG00000077264, PAK3, p21 (RAC1) activated kinase 3, [Score=349, Expect=9e-113]; ENSG00000180370, PAK2, p21 (RAC1) activated kinase 2, [Score=334, Expect=3e-107]; ENSG00000149269, PAK1, p21 (RAC1) activated kinase 1, [Score=332, Expect=3e-106]} {Mouse: ENSMUSG00000022781, Pak2, p21 (RAC1) activated kinase 2, [Score=333, Expect=3e-107]; ENSMUSG00000031284, Pak3, p21 (RAC1) activated kinase 3, [Score=332, Expect=2e-106]; ENSMUSG00000030774, Pak1, p21 (RAC1) activated kinase 1, [Score=332, Expect=2e-106]} {Dmel: FBgn0267698, Pak, p21-activated kinase, [Score=331, Expect=8e-103]} {Celegans: WBGene00003144, max-2, Serine/threonine-protein kinase max-2, [Score=321, Expect=9e-104]} {Smed: dd_Smed_v6_1765_0_1, dd_Smed_v6_1765_0_1, [RH, Score=368, Expect=8e-122]} {RNA1509_4715} {RNA1310_5360.1} {RNA815_4593}
19. MligTC455_43275 843 17.56 Mlig455_001191

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.424

 TMEM145 0.953 - - - 0.953 - - Mlig455_001191 {REF} {Length: 4377} {TRANSSPLICED} {Pfam: Rhodopsin-like GPCR transmembrane domain [PF10192.11, score=145.3]; Lung seven transmembrane receptor [PF06814.15, score=17.9]} {Human: ENSG00000167619, TMEM145, transmembrane protein 145, [Score=211, Expect=2e-60]} {Mouse: ENSMUSG00000043843, Tmem145, transmembrane protein 145, [Score=249, Expect=4e-74]} {Celegans: WBGene00007595, C15A7.2, [Score=163, Expect=2e-43]} {RNA1509_10503} {RNA1310_8521} {RNA815_9535}
20. MligTC455_43276 867 18.06 Mlig455_001350

Neo: -

Age: -

 0.953 - - - 0.953 - - Mlig455_001350 {REF} {Length: 1429} {RNA1509_27556} {RNA1310_36036} {RNA815_15620.2}
21. MligTC455_18592 298 6.21 Mlig455_010926, Mlig455_033158

Neo: -

Age: Down-Down-Up

Region-enriched R2: 4.164/0.00576

 0.951 - - - - 0.951 -

Mlig455_010926 {REF} {Length: 2976} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=62.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=22.7]} {RNA1310_17147} {RNA815_22741}

Mlig455_033158 {REF} {Length: 2437} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=61.0]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=22.6]} {RNA1310_17147} {RNA815_22741}
22. MligTC455_43218 137 2.86 Mlig455_025977

Neo: -

Age: -

 0.95 - - - 0.950 - - Mlig455_025977 {REF} {Length: 1409} {NoTransDecoderORF} {RNA1509_59012} {RNA1310_127643}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA