Data search


search
Exact
Search

Results for MligTC455_29849

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29849 36 0.74 Mlig455_037329

Neo: -

Age: -

Mlig455_037329 {REF} {Length: 3032} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=26.4]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=51.6, Expect=6e-08]} {RNA1509_2330} {RNA1310_40840} {RNA815_44098}

Cumulative graph for MligTC455_29849

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 2.642 1.045 0.46479 1.00000
RegionR2 -2.169 1.045 0.14069 0.46657
RegionR3 -0.907 1.045 0.42301 0.94550
RegionR4 1.126 1.045 0.40717 0.73424
RegionR5 -1.249 1.045 0.27165 0.59676
RegionR6 -0.126 1.045 0.87456 1.00000
RegionR7 0.178 1.045 0.91824 1.00000
RegionR8 0.506 1.045 0.81935 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.898 1.045 0.37240 1.00000
RegenerationR2 0.39 1.045 0.74194 0.97047
RegenerationR3 -1.1 1.045 0.41475 0.81176
RegenerationR4 -1.55 1.045 0.22436 0.67258
RegenerationR5 -0.219 1.045 0.86738 1.00000
RegenerationR6 -0.887 1.045 0.45754 0.77604
RegenerationBL -4.572 1.045 0.09238 0.35700
RegenerationTP -0.547 1.045 0.72799 1.00000


Genes with expression patterns similar to MligTC455_29849

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29849 36 0.74 Mlig455_037329

Neo: -

Age: -

3 - - - 1.000 1.000 1.000 Mlig455_037329 {REF} {Length: 3032} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=26.4]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=51.6, Expect=6e-08]} {RNA1509_2330} {RNA1310_40840} {RNA815_44098}
2. MligTC455_17518 230 4.8 Mlig455_060106

Neo: Int S/G2/M

Age: -

1.716 - - - 0.955 - 0.761 Mlig455_060106 {REF} {Length: 994} {NoTransDecoderORF} {RNA1509_50608} {RNA1310_58212} {RNA815_63349}
3. MligTC455_33734 18 0.38 Mlig455_050606

Neo: -

Age: -

0.967 - - - 0.967 - - Mlig455_050606 {REF} {Length: 1003} {NoTransDecoderORF} {RNA1509_50656} {RNA1310_18704} {RNA815_11979}
4. MligTC455_32829 107 2.23 Mlig455_006704

Neo: Germline

Age: Up-Down-Down

Region-enriched R5: 2.111/0.03651

ACOT1 0.965 - - - 0.965 - - Mlig455_006704 {REF} {Length: 2406} {TRANSSPLICED} {Pfam: BAAT / Acyl-CoA thioester hydrolase C terminal [PF08840.13, score=135.6]; Acyl-CoA thioester hydrolase/BAAT N-terminal region [PF04775.16, score=101.8]} {Human: ENSG00000184227, ACOT1, acyl-CoA thioesterase 1, [RH, Score=259, Expect=6e-82]; ENSG00000119673, ACOT2, acyl-CoA thioesterase 2, [RH, Score=256, Expect=4e-80]} {Mouse: ENSMUSG00000021226, Acot2, acyl-CoA thioesterase 2, [RH, Score=258, Expect=5e-81]; ENSMUSG00000052392, Acot4, acyl-CoA thioesterase 4, [RH, Score=257, Expect=4e-81]; ENSMUSG00000072949, Acot1, acyl-CoA thioesterase 1, [RH, Score=253, Expect=6e-80]; ENSMUSG00000043487, Acot6, acyl-CoA thioesterase 6, [RH, Score=252, Expect=2e-79]} {Celegans: WBGene00019404, K05B2.4, [RH, Score=167, Expect=3e-47]} {RNA1509_57694} {RNA1310_41974} {RNA815_11856.1}
5. MligTC455_52037 158 3.3 Mlig455_004185

Neo: -

Age: -

PIAS2 0.96 - - - 0.960 - - Mlig455_004185 {REF} {Length: 4387} {TRANSSPLICED} {Pfam: MIZ/SP-RING zinc finger [PF02891.22, score=65.3]; PINIT domain [PF14324.8, score=42.7]; Zinc-finger of the MIZ type in Nse subunit [PF11789.10, score=21.9]} {Human: ENSG00000078043, PIAS2, protein inhibitor of activated STAT 2, [Score=93.2, Expect=4e-19]} {Mouse: ENSMUSG00000025423, Pias2, protein inhibitor of activated STAT 2, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003612, Su(var)2-10, Suppressor of variegation 2-10, [Score=105, Expect=3e-23]} {Celegans: WBGene00001574, gei-17, E3 SUMO-protein ligase gei-17, [Score=87.4, Expect=1e-17]} {Smed: dd_Smed_v6_10185_0_1, dd_Smed_v6_10185_0_1, [Score=99.8, Expect=2e-21]} {RNA1509_24763, RNA1509_34035, RNA1509_42955} {RNA1310_5130, RNA1509_24763, RNA1509_34035} {RNA1509_24763, RNA1509_34035, RNA815_10497}
6. MligTC455_24534 14 0.29 Mlig455_011965

Neo: -

Age: -

0.956 - - - 0.956 - - Mlig455_011965 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_137924} {RNA815_7756.1}
7. MligTC455_29866 70 1.46 Mlig455_008787, Mlig455_068946

Neo: Irradiation

Age: Up-Down-Down

MSH6 0.952 - - - 0.952 - -

Mlig455_008787 {REF} {Length: 10819} {TRANSSPLICED} {Pfam: MutS domain I [PF01624.22, score=121.8]; MutS domain III [PF05192.20, score=79.3]; PWWP domain [PF00855.19, score=51.3]; MutS domain II [PF05188.19, score=27.8]} {Human: ENSG00000116062, MSH6, mutS homolog 6, [Score=544, Expect=2e-177]} {Mouse: ENSMUSG00000005370, Msh6, mutS homolog 6, [Score=563, Expect=0.0]} {Dmel: FBgn0036486, Msh6, [Score=417, Expect=2e-128]} {Celegans: WBGene00003422, msh-6, MSH (MutS Homolog) family, [Score=409, Expect=2e-125]} {Smed: dd_Smed_v6_15463_0_2, dd_Smed_v6_15463_0_2, [Score=466, Expect=8e-150]} {RNA1509_2552, RNA1509_40096} {RNA1310_55.1, RNA1509_40096} {RNA1509_40096, RNA815_1085}

Mlig455_068946 {REF} {Length: 697} {Pfam: Integrase core domain [PF00665.28, score=38.6]} {Smed: dd_Smed_v6_20599_0_1, dd_Smed_v6_20599_0_1, [Score=126, Expect=2e-34]} {RNA1509_2552} {RNA1310_55.1} {RNA815_1085}
8. MligTC455_26575 79 1.64 Mlig455_043886, Mlig455_043888

Neo: -

Age: -

HSPA1L 0.951 - - - - - 0.951

Mlig455_043886 {REF} {Length: 3014} {Pfam: Hsp70 protein [PF00012.22, score=846.8]; MreB/Mbl protein [PF06723.15, score=62.8]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=24.6]} {Human: ENSG00000234258, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=969, Expect=0.0]; ENSG00000226704, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=969, Expect=0.0]; ENSG00000204390, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=969, Expect=0.0]; ENSG00000206383, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=968, Expect=0.0]; ENSG00000236251, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=968, Expect=0.0]; ENSG00000237724, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000235941, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000204388, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000212866, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000126803, HSPA2, heat shock protein family A (Hsp70) member 2, [Score=957, Expect=0.0]; ENSG00000224501, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000232804, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [Score=957, Expect=0.0]; ENSG00000204389, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000234475, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000231555, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000215328, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=955, Expect=0.0]; ENSG00000173110, HSPA6, heat shock protein family A (Hsp70) member 6, [Score=941, Expect=0.0]} {Mouse: ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [Score=984, Expect=0.0]; ENSMUSG00000090877, Hspa1b, heat shock protein 1B, [Score=968, Expect=0.0]; ENSMUSG00000091971, Hspa1a, heat shock protein 1A, [Score=965, Expect=0.0]; ENSMUSG00000015656, Hspa8, heat shock protein 8, [Score=958, Expect=0.0]; ENSMUSG00000059970, Hspa2, heat shock protein 2, [Score=953, Expect=0.0]} {Dmel: FBgn0001230, Hsp68, Heat shock protein 68, [RH, Score=962, Expect=0.0]} {Celegans: WBGene00009691, F44E5.4, [RH, Score=920, Expect=0.0]} {Smed: dd_Smed_v6_2221_0_1, dd_Smed_v6_2221_0_1, [Score=940, Expect=0.0]} {RNA1509_6745} {RNA1310_35263.1} {RNA815_15729}

Mlig455_043888 {REF} {Length: 3065} {Pfam: Hsp70 protein [PF00012.22, score=846.8]; MreB/Mbl protein [PF06723.15, score=62.8]; FGGY family of carbohydrate kinases, C-terminal domain [PF02782.18, score=24.6]} {Human: ENSG00000234258, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=969, Expect=0.0]; ENSG00000226704, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=969, Expect=0.0]; ENSG00000204390, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=969, Expect=0.0]; ENSG00000206383, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=968, Expect=0.0]; ENSG00000236251, HSPA1L, heat shock protein family A (Hsp70) member 1 like, [Score=968, Expect=0.0]; ENSG00000237724, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000235941, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000204388, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000212866, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000126803, HSPA2, heat shock protein family A (Hsp70) member 2, [Score=957, Expect=0.0]; ENSG00000224501, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000232804, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000109971, HSPA8, heat shock protein family A (Hsp70) member 8, [Score=957, Expect=0.0]; ENSG00000204389, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000234475, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=957, Expect=0.0]; ENSG00000231555, HSPA1B, heat shock protein family A (Hsp70) member 1B, [Score=957, Expect=0.0]; ENSG00000215328, HSPA1A, heat shock protein family A (Hsp70) member 1A, [Score=955, Expect=0.0]; ENSG00000173110, HSPA6, heat shock protein family A (Hsp70) member 6, [Score=941, Expect=0.0]} {Mouse: ENSMUSG00000007033, Hspa1l, heat shock protein 1-like, [Score=984, Expect=0.0]; ENSMUSG00000090877, Hspa1b, heat shock protein 1B, [Score=968, Expect=0.0]; ENSMUSG00000091971, Hspa1a, heat shock protein 1A, [Score=965, Expect=0.0]; ENSMUSG00000015656, Hspa8, heat shock protein 8, [Score=958, Expect=0.0]; ENSMUSG00000059970, Hspa2, heat shock protein 2, [Score=953, Expect=0.0]} {Dmel: FBgn0001230, Hsp68, Heat shock protein 68, [RH, Score=962, Expect=0.0]} {Celegans: WBGene00009691, F44E5.4, [RH, Score=920, Expect=0.0]} {Smed: dd_Smed_v6_2221_0_1, dd_Smed_v6_2221_0_1, [Score=940, Expect=0.0]} {RNA1509_6745} {RNA1310_35263.1} {RNA815_15729}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA