M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_24534

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_24534 14 0.29 Mlig455_011965

Neo: -

Age: -

 Mlig455_011965 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_137924} {RNA815_7756.1}

Cumulative graph for MligTC455_24534

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.374 0.836 0.99958 1.00000
RegionR2 1.11 0.836 0.50835 0.88644
RegionR3 -0.655 0.836 0.99971 1.00000
RegionR4 1.841 0.836 0.02252 0.11087
RegionR5 -0.366 0.836 0.99979 1.00000
RegionR6 -1.946 0.836 0.99977 1.00000
RegionR7 -1.342 0.836 0.99980 1.00000
RegionR8 0.985 0.836 0.99974 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -2.864 0.836 0.99990 1.00000
RegenerationR2 -1.215 0.836 0.06316 0.41221
RegenerationR3 -0.088 0.836 0.32882 0.75473
RegenerationR4 -1.171 0.836 0.77157 0.97700
RegenerationR5 1.152 0.836 0.23075 0.66477
RegenerationR6 2.712 0.836 0.12259 0.43088
RegenerationBL -2.537 0.836 0.99995 1.00000
RegenerationTP -1.762 0.836 0.99994 1.00000


Genes with expression patterns similar to MligTC455_24534

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_24534 14 0.29 Mlig455_011965

Neo: -

Age: -

 3 - - 1.000 1.000 1.000 - Mlig455_011965 {REF} {Length: 1288} {NoTransDecoderORF} {RNA1509_28752} {RNA1310_137924} {RNA815_7756.1}
2. MligTC455_32928 79 1.65 Mlig455_016813

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.338

 PPIP5K1 1.909 - - 0.985 - 0.924 - Mlig455_016813 {REF} {Length: 5457} {Pfam: Histidine phosphatase superfamily (branch 2) [PF00328.24, score=356.4]; Diphosphoinositol pentakisphosphate kinase 2 N-terminal domain [PF18086.3, score=126.5]} {Human: ENSG00000168781, PPIP5K1, diphosphoinositol pentakisphosphate kinase 1, [RH, Score=987, Expect=0.0]; ENSG00000145725, PPIP5K2, diphosphoinositol pentakisphosphate kinase 2, [RH, Score=972, Expect=0.0]} {Mouse: ENSMUSG00000040648, Ppip5k2, diphosphoinositol pentakisphosphate kinase 2, [RH, Score=976, Expect=0.0]; ENSMUSG00000033526, Ppip5k1, diphosphoinositol pentakisphosphate kinase 1, [RH, Score=958, Expect=0.0]} {Dmel: FBgn0027279, l(1)G0196, lethal (1) G0196, [RH, Score=998, Expect=0.0]} {Celegans: WBGene00018508, F46F11.1, Inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase, [RH, Score=843, Expect=0.0]} {Smed: dd_Smed_v6_7203_0_1, dd_Smed_v6_7203_0_1, [RH, Score=1011, Expect=0.0]} {RNA1509_45082, RNA1509_5603} {RNA1310_1762, RNA1509_45082} {RNA1509_45082, RNA815_457}
3. MligTC455_27079 28 0.58 Mlig455_022102

Neo: -

Age: -

 1.844 - - 0.957 0.887 - - Mlig455_022102 {REF} {Length: 1305} {RNA1509_44223} {RNA1310_77029} {RNA815_64986}
4. MligTC455_39772 149 3.1 Mlig455_021243

Neo: -

Age: -

Region-enriched R7: 3.021/0.00442

 GEM 1.811 - - 0.969 - 0.842 - Mlig455_021243 {REF} {Length: 3783} {Pfam: Ras family [PF00071.24, score=77.9]; RsgA GTPase [PF03193.18, score=24.7]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=21.0]} {Human: ENSG00000164949, GEM, GTP binding protein overexpressed in skeletal muscle, [Score=97.4, Expect=8e-22]} {Mouse: ENSMUSG00000028214, Gem, GTP binding protein (gene overexpressed in skeletal muscle), [Score=97.4, Expect=5e-22]} {Dmel: FBgn0264753, Rgk1, Rad, Gem/Kir family member 1, [RH, Score=150, Expect=9e-38]} {Celegans: WBGene00013124, Y52B11A.4, [RH, Score=80.9, Expect=5e-16]} {Smed: dd_Smed_v6_11010_0_1, dd_Smed_v6_11010_0_1, [Score=163, Expect=9e-45]} {RNA1310_32533.1} {RNA815_17720}
5. MligTC455_52223 30 0.62 Mlig455_029799

Neo: -

Age: -

 GLRA2 1.703 - - 0.968 - 0.735 - Mlig455_029799 {REF} {Length: 3197} {tRNA: Val(CAC),pseudo, score=27.6} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=152.8]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=122.6]} {Human: ENSG00000101958, GLRA2, glycine receptor alpha 2, [RH, Score=350, Expect=1e-116]; ENSG00000145451, GLRA3, glycine receptor alpha 3, [RH, Score=345, Expect=4e-115]; ENSG00000145888, GLRA1, glycine receptor alpha 1, [RH, Score=338, Expect=3e-112]} {Mouse: ENSMUSG00000018589, Glra2, glycine receptor, alpha 2 subunit, [RH, Score=345, Expect=3e-115]; ENSMUSG00000038257, Glra3, glycine receptor, alpha 3 subunit, [RH, Score=342, Expect=2e-113]; ENSMUSG00000018595, Glra4, glycine receptor, alpha 4 subunit, [RH, Score=337, Expect=9e-112]; ENSMUSG00000000263, Glra1, glycine receptor, alpha 1 subunit, [RH, Score=334, Expect=1e-110]} {Dmel: FBgn0024963, GluClalpha, [RH, Score=301, Expect=8e-98]} {Celegans: WBGene00000232, avr-14, Inhibitory amino acid receptor subunit gbr-2A, [RH, Score=274, Expect=3e-88]} {Smed: dd_Smed_v6_24908_0_1, dd_Smed_v6_24908_0_1, [Score=265, Expect=1e-84]} {RNA1509_44790} {RNA1310_18585} {RNA815_38424}
6. MligTC455_08623 23 0.48 Mlig455_040665

Neo: -

Age: -

 SETMAR 1.664 - - - 0.956 0.708 - Mlig455_040665 {REF} {Length: 845} {Pfam: DDE superfamily endonuclease [PF13358.8, score=21.3]} {Human: ENSG00000170364, SETMAR, SET domain and mariner transposase fusion gene, [Score=72.4, Expect=1e-14]} {Smed: dd_Smed_v6_52102_0_1, dd_Smed_v6_52102_0_1, [Score=60.8, Expect=1e-12]} {RNA1509_17190} {RNA1310_10595.2} {RNA815_362.1}
7. MligTC455_31150 21 0.44 Mlig455_019495

Neo: -

Age: -

 0.999 - - 0.999 - - - Mlig455_019495 {REF} {Length: 1330} {NoTransDecoderORF} {RNA1310_136064} {RNA815_40041}
8. MligTC455_14033 19 0.39 Mlig455_060854

Neo: -

Age: -

 0.998 - - 0.998 - - - Mlig455_060854 {REF} {Length: 2028} {RNA1509_3734} {RNA1310_43722.2} {RNA815_21450.2}
9. MligTC455_17003 32 0.66 Mlig455_011034

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.983

 P2RX2 0.998 - - 0.998 - - - Mlig455_011034 {REF} {Length: 2894} {Pfam: ATP P2X receptor [PF00864.21, score=288.1]} {Human: ENSG00000187848, P2RX2, purinergic receptor P2X 2, [Score=206, Expect=3e-60]; ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=201, Expect=7e-59]} {Mouse: ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=202, Expect=8e-59]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=269, Expect=3e-84]} {RNA1509_56054} {RNA1310_31414} {RNA815_43099}
10. MligTC455_27580 33 0.7 Mlig455_006429

Neo: -

Age: Up-Down-Up

 CRB2 0.997 - - 0.997 - - - Mlig455_006429 {REF} {Length: 5937} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=162.2]; Human growth factor-like EGF [PF12661.9, score=76.7]; Laminin G domain [PF02210.26, score=31.2]} {Human: ENSG00000148204, CRB2, crumbs 2, cell polarity complex component, [Score=344, Expect=2e-99]; ENSG00000148400, NOTCH1, notch 1, [Score=327, Expect=1e-91]} {Mouse: ENSMUSG00000035403, Crb2, crumbs family member 2, [Score=337, Expect=1e-96]} {Dmel: FBgn0259685, crb, crumbs, [Score=428, Expect=1e-125]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=241, Expect=3e-64]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=243, Expect=2e-65]} {RNA1509_32484} {RNA1310_6715.1} {RNA815_693.1}
11. MligTC455_33734 18 0.38 Mlig455_050606

Neo: -

Age: -

 0.995 - - - 0.995 - - Mlig455_050606 {REF} {Length: 1003} {NoTransDecoderORF} {RNA1509_50656} {RNA1310_18704} {RNA815_11979}
12. MligTC455_11162 28 0.58 Mlig455_011955

Neo: -

Age: -

 WDR27 0.994 - - 0.994 - - - Mlig455_011955 {REF} {Length: 3573} {TRANSSPLICED} {Pfam: WD domain, G-beta repeat [PF00400.34, score=19.6]} {Human: ENSG00000184465, WDR27, WD repeat domain 27, [RH, Score=85.1, Expect=3e-16]} {Mouse: ENSMUSG00000046991, Wdr27, WD repeat domain 27, [RH, Score=85.9, Expect=1e-16]} {RNA1509_39566} {RNA1310_6747.1, RNA1509_39566} {RNA1509_39566, RNA815_26826}
13. MligTC455_13456 43 0.89 Mlig455_065240

Neo: -

Age: -

 ARRDC3 0.994 - - 0.994 - - - Mlig455_065240 {REF} {Length: 1385} {TRANSSPLICED} {Pfam: Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=64.6]; Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=54.7]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=81.6, Expect=2e-17]} {Mouse: ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=81.6, Expect=1e-17]} {Dmel: FBgn0037465, CG1105, [Score=95.5, Expect=1e-22]} {Celegans: WBGene00012467, arrd-8, ARRestin Domain protein, [Score=83.6, Expect=9e-19]} {RNA1310_40788} {RNA815_61509}
14. MligTC455_31365 164 3.42 Mlig455_063065

Neo: Irradiation

Age: Up-Down-Up, logFC(26M/2M)=0.426

 DDX27 0.994 - - 0.994 - - - Mlig455_063065 {REF} {Length: 3157} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=158.5]; Helicase conserved C-terminal domain [PF00271.33, score=98.5]; Type III restriction enzyme, res subunit [PF04851.17, score=23.2]; Utp25, U3 small nucleolar RNA-associated SSU processome protein 25 [PF06862.14, score=18.0]} {Human: ENSG00000124228, DDX27, DEAD-box helicase 27, [RH, Score=531, Expect=9e-180]} {Mouse: ENSMUSG00000017999, Ddx27, DEAD (Asp-Glu-Ala-Asp) box polypeptide 27, [RH, Score=518, Expect=9e-175]} {Dmel: FBgn0021995, Rs1, [RH, Score=493, Expect=4e-165]} {Celegans: WBGene00022148, ddx-27, DEAD boX helicase homolog, [RH, Score=506, Expect=9e-171]} {Smed: dd_Smed_v6_5413_0_1, dd_Smed_v6_5413_0_1, [RH, Score=468, Expect=8e-158]} {RNA1509_13819} {RNA1310_9851, RNA1509_13819} {RNA1509_13819, RNA815_4333}
15. MligTC455_50586 162 3.38 Mlig455_052740

Neo: Int S/G2/M

Age: Up-Down-Down

 0.994 - - 0.994 - - - Mlig455_052740 {REF} {Length: 4917} {TRANSSPLICED} {RNA1509_17849} {RNA1310_8853.1, RNA1509_17849} {RNA1509_17849, RNA815_1759.1}
16. MligTC455_18445 21 0.43 Mlig455_048254, Mlig455_048287

Neo: -

Age: -

 NMBR 0.991 - - 0.991 - - -

Mlig455_048254 {REF} {Length: 2238} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=119.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=40.7]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=37.5]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=25.8]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=128, Expect=2e-32]; ENSG00000102239, BRS3, bombesin receptor subtype 3, [Score=125, Expect=4e-31]} {Mouse: ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=129, Expect=5e-33]; ENSMUSG00000031364, Grpr, gastrin releasing peptide receptor, [Score=124, Expect=4e-31]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=132, Expect=2e-33]} {Celegans: WBGene00009619, npr-6, NeuroPeptide Receptor family, [Score=88.6, Expect=7e-19]} {Smed: dd_Smed_v6_17567_0_1, dd_Smed_v6_17567_0_1, [Score=132, Expect=3e-34]} {RNA1310_54760}

Mlig455_048287 {REF} {Length: 2331} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=119.6]; Serpentine type 7TM GPCR chemoreceptor Srsx [PF10320.11, score=40.7]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=37.5]; Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=25.8]} {Human: ENSG00000135577, NMBR, neuromedin B receptor, [Score=128, Expect=2e-32]; ENSG00000102239, BRS3, bombesin receptor subtype 3, [Score=125, Expect=3e-31]} {Mouse: ENSMUSG00000019865, Nmbr, neuromedin B receptor, [Score=129, Expect=8e-33]; ENSMUSG00000031364, Grpr, gastrin releasing peptide receptor, [Score=124, Expect=4e-31]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=132, Expect=2e-33]} {Celegans: WBGene00009619, npr-6, NeuroPeptide Receptor family, [Score=88.6, Expect=6e-19]} {Smed: dd_Smed_v6_17567_0_1, dd_Smed_v6_17567_0_1, [Score=132, Expect=3e-34]} {RNA1310_54760}
17. MligTC455_52653 6 0.13 Mlig455_034395

Neo: -

Age: -

 P2RX4 0.991 - - 0.991 - - - Mlig455_034395 {REF} {Length: 2942} {Pfam: ATP P2X receptor [PF00864.21, score=433.9]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=331, Expect=2e-108]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=310, Expect=2e-100]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [RH, Score=417, Expect=3e-141]} {RNA1310_29566.1} {RNA815_49663}
18. MligTC455_37967 12 0.24 Mlig455_031430, Mlig455_056464

Neo: -

Age: -

 0.989 - - 0.989 - - -

Mlig455_031430 {REF} {Length: 1495} {TRANSSPLICED} {RNA1509_56561} {RNA1310_4540} {RNA815_24860}

Mlig455_056464 {REF} {Length: 1793} {TRANSSPLICED} {RNA1509_56561} {RNA1310_4540} {RNA815_18490}
19. MligTC455_13741 6 0.12 Mlig455_062833

Neo: -

Age: Down-Up-Down

 GLUL 0.988 - - 0.988 - - - Mlig455_062833 {REF} {Length: 3461} {Pfam: Glutamine synthetase, beta-Grasp domain [PF03951.21, score=49.3]; Glutamine synthetase, catalytic domain [PF00120.26, score=46.0]} {Human: ENSG00000135821, GLUL, glutamate-ammonia ligase, [RH, Score=519, Expect=0.0]} {Mouse: ENSMUSG00000026473, Glul, glutamate-ammonia ligase (glutamine synthetase), [RH, Score=522, Expect=0.0]} {Dmel: FBgn0001145, Gs2, Glutamine synthetase 2, [RH, Score=529, Expect=0.0]} {Celegans: WBGene00001604, gln-3, Glutamine synthetase, [RH, Score=530, Expect=0.0]} {Smed: dd_Smed_v6_646_0_1, dd_Smed_v6_646_0_1, [RH, Score=573, Expect=0.0]} {RNA1509_3029} {RNA1310_32301}
20. MligTC455_32900 52 1.08 Mlig455_050893

Neo: -

Age: logFC(26M/2M)=0.368

 CA7 0.988 - - 0.988 - - - Mlig455_050893 {REF} {Length: 4828} {Pfam: Eukaryotic-type carbonic anhydrase [PF00194.23, score=224.5]} {Human: ENSG00000168748, CA7, carbonic anhydrase 7, [Score=201, Expect=6e-64]} {Mouse: ENSMUSG00000031883, Car7, carbonic anhydrase 7, [Score=196, Expect=2e-62]} {Dmel: FBgn0027844, CAH1, Carbonic anhydrase 1, [Score=176, Expect=2e-54]} {Celegans: WBGene00000281, cah-3, Putative carbonic anhydrase 3, [Score=135, Expect=8e-39]} {Smed: dd_Smed_v6_5784_0_1, dd_Smed_v6_5784_0_1, [Score=184, Expect=7e-58]} {RNA1509_23444} {RNA1310_23047.1} {RNA815_11571.2}
21. MligTC455_09535 21 0.44 Mlig455_045585

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.720

 0.983 - - 0.983 - - - Mlig455_045585 {REF} {Length: 3644} {RNA1310_75578} {RNA815_42836.2}
22. MligTC455_13153 4 0.08 Mlig455_010971

Neo: -

Age: -

 0.983 - - 0.983 - - - Mlig455_010971 {REF} {Length: 422} {NoTransDecoderORF}
23. MligTC455_18284 58 1.21 Mlig455_020141

Neo: -

Age: logFC(26M/2M)=0.808

 XPO1 0.979 - - 0.979 - - - Mlig455_020141 {REF} {Length: 3553} {TRANSSPLICED} {Pfam: CRM1 C terminal [PF08767.13, score=277.8]; CRM1 / Exportin repeat 2 [PF18784.3, score=119.1]; CRM1 / Exportin repeat 3 [PF18787.3, score=97.0]; Exportin 1-like protein [PF08389.14, score=84.0]; Chromosome region maintenance or exportin repeat [PF18777.3, score=62.5]; Importin-beta N-terminal domain [PF03810.21, score=50.9]; Down-regulated in metastasis [PF07539.14, score=22.4]} {Human: ENSG00000082898, XPO1, exportin 1, [Score=1325, Expect=0.0]} {Mouse: ENSMUSG00000020290, Xpo1, exportin 1, [Score=1321, Expect=0.0]} {Dmel: FBgn0020497, emb, embargoed, [Score=1167, Expect=0.0]} {Celegans: WBGene00002078, xpo-1, EXPOrtin (Nuclear export receptor), [Score=922, Expect=0.0]} {Smed: dd_Smed_v6_3264_0_1, dd_Smed_v6_3264_0_1, [Score=1295, Expect=0.0]} {RNA1509_1988} {RNA1310_2868} {RNA815_846}
24. MligTC455_38049 11 0.23 Mlig455_051337

Neo: -

Age: -

 0.979 - - 0.979 - - - Mlig455_051337 {REF} {Length: 2246} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=25.9]} {Smed: dd_Smed_v6_19397_0_1, dd_Smed_v6_19397_0_1, [Score=49.3, Expect=5e-07]} {RNA1310_57034} {RNA815_35311}
25. MligTC455_17518 230 4.8 Mlig455_060106

Neo: Int S/G2/M

Age: -

 0.976 - - - 0.976 - - Mlig455_060106 {REF} {Length: 994} {NoTransDecoderORF} {RNA1509_50608} {RNA1310_58212} {RNA815_63349}
26. MligTC455_39694 73 1.51 Mlig455_021504, Mlig455_067393

Neo: -

Age: -

 0.975 - - 0.975 - - -

Mlig455_021504 {REF} {Length: 1105} {Pfam: Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=25.0]} {Smed: dd_Smed_v6_2373_0_1, dd_Smed_v6_2373_0_1, [Score=70.9, Expect=4e-13]} {RNA1509_19671} {RNA1310_1157} {RNA815_38185}

Mlig455_067393 {REF} {Length: 3563} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=112, Expect=4e-25]} {RNA1509_19671} {RNA1310_1157} {RNA815_36782}
27. MligTC455_52652 6 0.13 Mlig455_034341

Neo: -

Age: -

 P2RX4 0.973 - - 0.973 - - - Mlig455_034341 {REF} {Length: 2208} {Pfam: ATP P2X receptor [PF00864.21, score=143.8]} {Human: ENSG00000135124, P2RX4, purinergic receptor P2X 4, [Score=121, Expect=3e-31]} {Mouse: ENSMUSG00000029470, P2rx4, purinergic receptor P2X, ligand-gated ion channel 4, [Score=105, Expect=1e-25]; ENSMUSG00000029468, P2rx7, purinergic receptor P2X, ligand-gated ion channel, 7, [Score=104, Expect=1e-24]; ENSMUSG00000005950, P2rx5, purinergic receptor P2X, ligand-gated ion channel, 5, [Score=102, Expect=4e-24]; ENSMUSG00000029503, P2rx2, purinergic receptor P2X, ligand-gated ion channel, 2, [Score=101, Expect=7e-24]} {Smed: dd_Smed_v6_10968_0_1, dd_Smed_v6_10968_0_1, [Score=161, Expect=1e-45]} {RNA1509_56886} {RNA1310_41878} {RNA815_21866}
28. MligTC455_16781 32 0.67 Mlig455_003020, Mlig455_003313

Neo: -

Age: -

 0.971 - - 0.971 - - -

Mlig455_003020 {REF} {Length: 518} {Pfam: Immunoreceptor tyrosine-based activation motif [PF02189.17, score=26.8]} {RNA1310_57787} {RNA815_49158}

Mlig455_003313 {REF} {Length: 905} {Pfam: Immunoreceptor tyrosine-based activation motif [PF02189.17, score=74.4]} {RNA1310_57787} {RNA815_49158}
29. MligTC455_43131 121 2.51 Mlig455_042022

Neo: -

Age: Down-Down-Up

 ANK1 0.969 - - 0.969 - - - Mlig455_042022 {REF} {Length: 2609} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=59.5]; Ankyrin repeats (many copies) [PF13857.8, score=57.9]; Ankyrin repeats (many copies) [PF13637.8, score=55.3]; Ankyrin repeat [PF13606.8, score=44.4]; Ankyrin repeat [PF00023.32, score=40.3]; SOCS box [PF07525.18, score=31.4]} {Human: ENSG00000029534, ANK1, ankyrin 1, [Score=67.0, Expect=2e-11]; ENSG00000145362, ANK2, ankyrin 2, [Score=66.2, Expect=3e-11]; ENSG00000151150, ANK3, ankyrin 3, [Score=64.7, Expect=1e-10]} {Mouse: ENSMUSG00000031543, Ank1, ankyrin 1, erythroid, [Score=67.4, Expect=1e-11]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=64.7, Expect=1e-10]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=64.3, Expect=7e-11]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=57.8, Expect=6e-09]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=61.2, Expect=4e-10]} {RNA1509_37297} {RNA1310_14378} {RNA815_6651}
30. MligTC455_11619 48 1 Mlig455_015930, Mlig455_059692

Neo: -

Age: -

 CPNE3 0.968 - - 0.968 - - -

Mlig455_015930 {REF} {Length: 2409} {Pfam: C2 domain [PF00168.32, score=33.7]} {Human: ENSG00000085719, CPNE3, copine 3, [Score=87.4, Expect=6e-19]} {Mouse: ENSMUSG00000028228, Cpne3, copine III, [Score=85.5, Expect=2e-18]; ENSMUSG00000074643, Cpne1, copine I, [Score=81.6, Expect=2e-17]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=57.0, Expect=5e-09]} {Smed: dd_Smed_v6_2149_0_4, dd_Smed_v6_2149_0_4, [Score=75.1, Expect=3e-15]} {RNA1310_39685} {RNA815_22508}

Mlig455_059692 {REF} {Length: 2378} {Pfam: C2 domain [PF00168.32, score=33.7]} {Human: ENSG00000085719, CPNE3, copine 3, [Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000028228, Cpne3, copine III, [Score=85.9, Expect=1e-18]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_2149_0_4, dd_Smed_v6_2149_0_4, [Score=75.1, Expect=3e-15]} {RNA1310_39685} {RNA815_22508}
31. MligTC455_01033 3 0.06 Mlig455_010574

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_010574 {REF} {Length: 347} {NoTransDecoderORF} {RNA1310_119310}
32. MligTC455_21582 28 0.58 Mlig455_048795

Neo: -

Age: -

 0.967 - - - 0.967 - - Mlig455_048795 {REF} {Length: 582} {NoTransDecoderORF}
33. MligTC455_11160 13 0.28 Mlig455_053261, Mlig455_065033

Neo: -

Age: -

 0.965 - - 0.965 - - -

Mlig455_053261 {REF} {Length: 1117}

Mlig455_065033 {REF} {Length: 776}
34. MligTC455_50972 103 2.14 Mlig455_005384

Neo: -

Age: -

 0.965 - - 0.965 - - - Mlig455_005384 {REF} {Length: 471} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_11238} {RNA1310_16270}
35. MligTC455_32661 38 0.78 Mlig455_068427

Neo: -

Age: -

 0.963 - - 0.963 - - - Mlig455_068427 {REF} {Length: 5227} {NoTransDecoderORF} {RNA1509_26128} {RNA1310_7005.1} {RNA815_8730.1}
36. MligTC455_17328 97 2.02 Mlig455_013052

Neo: -

Age: -

 MLYCD 0.962 - - - - 0.962 - Mlig455_013052 {REF} {Length: 4572} {Pfam: Malonyl-CoA decarboxylase C-terminal domain [PF05292.13, score=165.0]} {Human: ENSG00000103150, MLYCD, malonyl-CoA decarboxylase, [Score=172, Expect=4e-50]} {Mouse: ENSMUSG00000074064, Mlycd, malonyl-CoA decarboxylase, [Score=177, Expect=3e-52]} {Celegans: WBGene00009439, mlcd-1, MaLonyl CoA Decarboxylase, [Score=117, Expect=1e-30]} {Smed: dd_Smed_v6_6439_0_1, dd_Smed_v6_6439_0_1, [Score=168, Expect=5e-49]} {RNA1509_10767} {RNA1310_19073} {RNA815_8103.1}
37. MligTC455_28286 49 1.01 Mlig455_023537

Neo: -

Age: -

 0.962 - - 0.962 - - - Mlig455_023537 {REF} {Length: 2542} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
38. MligTC455_33202 92 1.92 Mlig455_016989, Mlig455_021240, Mlig455_062989

Neo: -

Age: -

 FCN2 0.962 - - 0.962 - - -

Mlig455_016989 {REF} {Length: 3214} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=143.0]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=135, Expect=2e-37]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=130, Expect=5e-34]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=128, Expect=1e-33]; ENSMUSG00000026938, Fcna, ficolin A, [Score=126, Expect=1e-33]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=125, Expect=2e-32]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=124, Expect=5e-32]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=122, Expect=2e-32]} {Dmel: FBgn0034160, CG5550, [RH, Score=136, Expect=2e-38]} {Celegans: WBGene00017013, ensh-1, [RH, Score=66.2, Expect=4e-12]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=46.2, Expect=1e-06]} {RNA1509_26827} {RNA1310_48119} {RNA815_52558}

Mlig455_021240 {REF} {Length: 2191} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=112.3]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=104, Expect=6e-26]; ENSG00000116194, ANGPTL1, angiopoietin like 1, [Score=99.0, Expect=3e-23]} {Mouse: ENSMUSG00000033544, Angptl1, angiopoietin-like 1, [Score=98.2, Expect=4e-23]; ENSMUSG00000004105, Angptl2, angiopoietin-like 2, [Score=97.4, Expect=7e-23]; ENSMUSG00000026938, Fcna, ficolin A, [Score=97.1, Expect=3e-23]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=95.5, Expect=3e-22]; ENSMUSG00000042436, Mfap4, microfibrillar-associated protein 4, [Score=94.4, Expect=1e-22]; ENSMUSG00000026835, Fcnb, ficolin B, [Score=93.6, Expect=4e-22]} {Dmel: FBgn0034160, CG5550, [Score=104, Expect=9e-27]} {Celegans: WBGene00017013, ensh-1, [Score=52.8, Expect=8e-08]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=46.6, Expect=8e-07]} {RNA1509_26827} {RNA1310_48119} {RNA815_52558}

Mlig455_062989 {REF} {Length: 1896} {NoTransDecoderORF} {RNA1509_54825} {RNA1310_118627, RNA1509_54825} {RNA1509_54825, RNA815_47526}
39. MligTC455_03187 79 1.65 Mlig455_069348

Neo: Irradiation

Age: -

 0.959 - - 0.959 - - - Mlig455_069348 {REF} {Length: 4498} {TRANSSPLICED} {Pfam: OST-HTH/LOTUS domain [PF12872.9, score=38.4]; Contractile injection system tape measure protein [PF19268.1, score=21.1]} {RNA1509_27943} {RNA1310_17912.1} {RNA815_23339}
40. MligTC455_17407 327 6.8 Mlig455_044727

Neo: Irradiation

Age: -

Region-enriched R5: 2.345/0.00045

 ZNRF2 0.959 - - - - 0.959 - Mlig455_044727 {REF} {Length: 2427} {TRANSSPLICED} {Pfam: Ring finger domain [PF13639.8, score=39.0]; RING-like zinc finger [PF17123.7, score=26.3]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=24.9]; RING-type zinc-finger [PF13445.8, score=20.4]} {Human: ENSG00000180233, ZNRF2, zinc and ring finger 2, [RH, Score=145, Expect=8e-42]} {Mouse: ENSMUSG00000058446, Znrf2, zinc and ring finger 2, [RH, Score=147, Expect=8e-43]} {Dmel: FBgn0029911, CG14435, [RH, Score=145, Expect=3e-41]} {Celegans: WBGene00022115, Y71F9AL.10, [RH, Score=144, Expect=4e-42]} {Smed: dd_Smed_v6_2436_0_1, dd_Smed_v6_2436_0_1, [RH, Score=130, Expect=1e-36]} {RNA1509_37305} {RNA1310_28658} {RNA815_2923}
41. MligTC455_20582 38 0.8 Mlig455_007847, Mlig455_021131

Neo: -

Age: -

Region-enriched R4: 8.037/0.00054

 CCKBR 0.958 - - 0.958 - - -

Mlig455_007847 {REF} {Length: 2426} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=112.4]} {Human: ENSG00000110148, CCKBR, cholecystokinin B receptor, [Score=79.3, Expect=3e-15]} {Mouse: ENSMUSG00000030898, Cckbr, cholecystokinin B receptor, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=48.9, Expect=6e-06]} {Celegans: WBGene00013187, npr-34, NeuroPeptide Receptor family, [Score=82.4, Expect=1e-16]} {Smed: dd_Smed_v6_15151_0_1, dd_Smed_v6_15151_0_1, [Score=62.4, Expect=2e-10]} {RNA1310_74488} {RNA815_51301}

Mlig455_021131 {REF} {Length: 1858} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=112.4]} {Human: ENSG00000110148, CCKBR, cholecystokinin B receptor, [Score=79.3, Expect=3e-15]} {Mouse: ENSMUSG00000030898, Cckbr, cholecystokinin B receptor, [Score=73.6, Expect=1e-13]} {Dmel: FBgn0050106, CCHa1-R, CCHamide-1 receptor, [Score=48.9, Expect=6e-06]} {Celegans: WBGene00013187, npr-34, NeuroPeptide Receptor family, [Score=82.4, Expect=1e-16]} {Smed: dd_Smed_v6_15151_0_1, dd_Smed_v6_15151_0_1, [Score=62.4, Expect=2e-10]} {RNA1310_74488} {RNA815_51301}
42. MligTC455_45403 60 1.26 Mlig455_001365

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.466

 SLC6A5 0.958 - - 0.958 - - - Mlig455_001365 {REF} {Length: 6779} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=804.8]} {Human: ENSG00000165970, SLC6A5, solute carrier family 6 member 5, [Score=421, Expect=2e-128]} {Mouse: ENSMUSG00000039728, Slc6a5, solute carrier family 6 (neurotransmitter transporter, glycine), member 5, [Score=423, Expect=4e-129]} {Dmel: FBgn0034911, CG5549, [Score=396, Expect=8e-116]} {Celegans: WBGene00000934, dat-1, Sodium-dependent dopamine transporter, [Score=342, Expect=1e-102]} {Smed: dd_Smed_v6_4290_0_1, dd_Smed_v6_4290_0_1, [Score=389, Expect=9e-120]} {RNA1509_14194} {RNA1310_1653.1} {RNA815_6812}
43. MligTC455_06677 36 0.75 Mlig455_046172

Neo: -

Age: Down-Up-Down

 0.956 - - - 0.956 - - Mlig455_046172 {REF} {Length: 571} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_30549} {RNA1310_22209.1} {RNA815_17275}
44. MligTC455_29849 36 0.74 Mlig455_037329

Neo: -

Age: -

 0.956 - - - 0.956 - - Mlig455_037329 {REF} {Length: 3032} {Pfam: Chromo (CHRromatin Organisation MOdifier) domain [PF00385.26, score=26.4]} {Smed: dd_Smed_v6_9908_0_1, dd_Smed_v6_9908_0_1, [Score=51.6, Expect=6e-08]} {RNA1509_2330} {RNA1310_40840} {RNA815_44098}
45. MligTC455_06139 5 0.1 Mlig455_060149

Neo: -

Age: -

 0.953 - - 0.953 - - - Mlig455_060149 {REF} {Length: 980} {RNA1310_23886.1} {RNA815_8813.1}
46. MligTC455_35089 36 0.75 Mlig455_017906

Neo: Int S/G2/M

Age: Up-Down-Up

Regeneration-upregulated R5: 6.095

Regeneration-enriched R5: 6.095

 0.95 - - - 0.950 - - Mlig455_017906 {REF} {Length: 1284} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=52.3]; C2H2-type zinc finger [PF13894.8, score=49.6]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=20.1]; Zinc-finger of C2H2 type [PF12874.9, score=19.0]} {Mouse: ENSMUSG00000025602, Zfp202, zinc finger protein 202, [Score=53.1, Expect=4e-07]; ENSMUSG00000030380, Mzf1, myeloid zinc finger 1, [Score=50.8, Expect=2e-06]} {Dmel: FBgn0030240, CG2202, [Score=52.0, Expect=7e-07]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=53.9, Expect=1e-07]} {RNA1509_40803, RNA1509_53048} {RNA1310_18926, RNA1509_40803, RNA1509_53048} {RNA1509_40803, RNA1509_53048, RNA815_10511.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA