Data search
Results for MligTC455_29899
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29899 | 772 | 16.08 | Mlig455_048977 | Neo: - Age: - |
Mlig455_048977 {REF} {Length: 3351} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.0]} {Smed: dd_Smed_v6_17939_1_1, dd_Smed_v6_17939_1_1, [RH, Score=89.7, Expect=1e-18]} {RNA1509_36423, RNA1509_42873} {RNA1310_11059.1, RNA1509_36423, RNA1509_42873} {RNA1509_36423, RNA1509_42873, RNA815_8111} |
Cumulative graph for MligTC455_29899
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.375 | 4.312 | 0.74082 | 1.00000 | |
| RegionR2 | 0.728 | 4.312 | 0.11269 | 0.41505 | |
| RegionR3 | 0.02 | 4.312 | 0.95914 | 1.00000 | |
| RegionR4 | -0.551 | 4.312 | 0.18914 | 0.46348 | |
| RegionR5 | 0.828 | 4.312 | 0.00861 | 0.05175 | |
| RegionR6 | -0.438 | 4.312 | 0.29260 | 0.88410 | |
| RegionR7 | 0.203 | 4.312 | 0.69821 | 1.00000 | |
| RegionR8 | -0.414 | 4.312 | 0.59561 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -7.211 | 4.312 | 0.08438 | 0.78241 | |
| RegenerationR2 | 0.304 | 4.312 | 0.34631 | 0.77960 | |
| RegenerationR3 | 0.458 | 4.312 | 0.24034 | 0.67523 | |
| RegenerationR4 | 0.886 | 4.312 | 0.01978 | 0.22111 | |
| RegenerationR5 | -0.077 | 4.312 | 0.81196 | 0.99212 | |
| RegenerationR6 | 1.131 | 4.312 | 0.00515 | 0.08668 | |
| RegenerationBL | 1.05 | 4.312 | 0.02481 | 0.17336 | |
| RegenerationTP | -0.017 | 4.312 | 0.97943 | 1.00000 |
Genes with expression patterns similar to MligTC455_29899
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29899 | 772 | 16.08 | Mlig455_048977 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_048977 {REF} {Length: 3351} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.0]} {Smed: dd_Smed_v6_17939_1_1, dd_Smed_v6_17939_1_1, [RH, Score=89.7, Expect=1e-18]} {RNA1509_36423, RNA1509_42873} {RNA1310_11059.1, RNA1509_36423, RNA1509_42873} {RNA1509_36423, RNA1509_42873, RNA815_8111} | |
| 2. | MligTC455_44940 | 594 | 12.38 | Mlig455_059184 | Neo: Int S/G2/M Age: - Region-enriched R5: 2.259/0.00119 |
1.752 | 0.798 | - | - | - | - | 0.954 | Mlig455_059184 {REF} {Length: 1343} {TRANSSPLICED} {Pfam: RNAse P Rpr2/Rpp21/SNM1 subunit domain [PF04032.18, score=45.4]} {RNA1509_33930} {RNA1310_51549.1, RNA1509_33930} {RNA1509_33930, RNA815_45473} | |
| 3. | MligTC455_40542 | 602 | 12.53 | Mlig455_069897 | Neo: - Age: Up-Down-Up |
UBE3C | 1.749 | - | - | 0.792 | - | 0.957 | - | Mlig455_069897 {REF} {Length: 4281} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=262.5]} {Human: ENSG00000009335, UBE3C, ubiquitin protein ligase E3C, [RH, Score=365, Expect=9e-109]} {Mouse: ENSMUSG00000039000, Ube3c, ubiquitin protein ligase E3C, [RH, Score=363, Expect=3e-108]} {Dmel: FBgn0034989, CG3356, [RH, Score=352, Expect=4e-104]} {Celegans: WBGene00008429, etc-1, E3 ubiquitin-protein ligase etc-1, [RH, Score=254, Expect=2e-70]} {Smed: dd_Smed_v6_8915_0_1, dd_Smed_v6_8915_0_1, [RH, Score=319, Expect=9e-93]} {RNA1509_52489, RNA1509_7273} {RNA1310_2336, RNA1509_52489} {RNA1509_52489, RNA815_688.1} |
| 4. | MligTC455_50309 | 756 | 15.76 | Mlig455_009133 | Neo: Irradiation Age: logFC(26M/2M)=0.305 |
SLC26A5 | 1.746 | - | 0.964 | - | - | 0.782 | - | Mlig455_009133 {REF} {Length: 7468} {TRANSSPLICED} {Pfam: Sulfate permease family [PF00916.22, score=347.9]; STAS domain [PF01740.23, score=95.6]} {Human: ENSG00000170615, SLC26A5, solute carrier family 26 member 5, [RH, Score=433, Expect=1e-139]} {Mouse: ENSMUSG00000029015, Slc26a5, solute carrier family 26, member 5, [RH, Score=444, Expect=8e-144]} {Dmel: FBgn0036770, Prestin, [RH, Score=363, Expect=3e-113]} {Celegans: WBGene00020914, sulp-6, SULfate Permease family, [RH, Score=375, Expect=5e-117]} {Smed: dd_Smed_v6_4250_0_2, dd_Smed_v6_4250_0_2, [Score=470, Expect=3e-154]} {RNA1509_33426, RNA1509_33898, RNA1509_9370} {RNA1310_7265, RNA1509_33426, RNA1509_33898, RNA1509_9370} {RNA1509_33426, RNA1509_33898, RNA1509_9370, RNA815_2295} |
| 5. | MligTC455_48641 | 2177 | 45.36 | Mlig455_058201 | Neo: - Age: logFC(26M/2M)=0.592 |
1.692 | - | - | - | 0.719 | 0.973 | - | Mlig455_058201 {REF} {Length: 1045} {TRANSSPLICED} {RNA1509_11719, RNA1509_1583} {RNA1310_33179, RNA1509_11719} {RNA1509_11719, RNA815_15253} | |
| 6. | Mlig999032.1 | 1.683 | - | - | - | 0.954 | 0.729 | - | ||||||
| 7. | MligTC455_47907 | 644 | 13.42 | Mlig455_035005 | Neo: Irradiation Age: logFC(26M/2M)=0.978 Region-enriched R5: 2.151/0.00000 |
ZNF484 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_035005 {REF} {Length: 1895} {TRANSSPLICED} {Pfam: Activity-dependent neuroprotector homeobox protein N-terminal [PF19627.1, score=18.9]} {Human: ENSG00000127081, ZNF484, zinc finger protein 484, [Score=80.1, Expect=5e-15]; ENSG00000261221, ZNF865, zinc finger protein 865, [Score=76.3, Expect=8e-14]} {Mouse: ENSMUSG00000074405, Zfp865, zinc finger protein 865, [Score=76.6, Expect=4e-14]; ENSMUSG00000042063, Zfp386, zinc finger protein 386 (Kruppel-like), [Score=75.9, Expect=6e-14]} {Dmel: FBgn0002573, sens, senseless, [Score=65.5, Expect=7e-11]} {Celegans: WBGene00003909, pag-3, Zinc finger protein PAG-3, [Score=62.0, Expect=3e-10]} {Smed: dd_Smed_v6_14824_0_1, dd_Smed_v6_14824_0_1, [Score=58.5, Expect=4e-09]} {RNA1509_16533} {RNA1310_10660.1, RNA1509_16533} {RNA1509_16533, RNA815_21272.1} |
| 8. | MligTC455_50019 | 248 | 5.17 | Mlig455_050542 | Neo: Int S/G2/M Age: Up-Up-Down |
NSD2 | 0.971 | - | 0.971 | - | - | - | - | Mlig455_050542 {REF} {Length: 4778} {TRANSSPLICED} {Pfam: PWWP domain [PF00855.19, score=113.6]; SET domain [PF00856.30, score=80.1]; AWS domain [PF17907.3, score=47.6]; PHD-finger [PF00628.31, score=38.8]; NSD Cys-His rich domain [PF17982.3, score=32.8]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [RH, Score=691, Expect=0.0]; ENSG00000165671, NSD1, nuclear receptor binding SET domain protein 1, [RH, Score=667, Expect=0.0]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [RH, Score=664, Expect=0.0]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [RH, Score=696, Expect=0.0]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [RH, Score=674, Expect=0.0]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [RH, Score=431, Expect=1e-130]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=142, Expect=5e-34]} {Smed: dd_Smed_v6_4755_0_1, dd_Smed_v6_4755_0_1, [RH, Score=582, Expect=0.0]} {RNA1509_8385} {RNA1310_4002, RNA1509_8385} {RNA1509_8385, RNA815_849} |
| 9. | MligTC455_49426 | 990 | 20.63 | Mlig455_046826 | Neo: Irradiation Age: - Region-enriched R5: 1.926/0.00000 Regeneration-upregulated BL: 1.864 Regeneration-enriched BL: 1.864 |
CNOT9 | 0.951 | 0.951 | - | - | - | - | - | Mlig455_046826 {REF} {Length: 1688} {Pfam: Cell differentiation family, Rcd1-like [PF04078.15, score=257.2]} {Human: ENSG00000144580, CNOT9, CCR4-NOT transcription complex subunit 9, [Score=260, Expect=6e-87]} {Mouse: ENSMUSG00000026174, Cnot9, CCR4-NOT transcription complex, subunit 9, [Score=260, Expect=4e-87]} {Dmel: FBgn0031047, Rcd-1, Required for cell differentiation 1, [Score=239, Expect=6e-79]} {Celegans: WBGene00016139, ntl-9, NOT-Like (Yeast CCR4/NOT complex component), [Score=213, Expect=1e-68]} {Smed: dd_Smed_v6_2344_0_1, dd_Smed_v6_2344_0_1, [Score=269, Expect=3e-90]} {RNA1509_5386} {RNA1310_13428.2} {RNA815_5416.2} |
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