TomoSeq data search

Data search

Results for Mlig999032.1

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation

Cumulative graph for Mlig999032.1

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-2.812	8.115	0.00313	0.18066
RegionR2	0.152	8.115	0.82153	1.00000
RegionR3	0.575	8.115	0.32972	0.86759
RegionR4	1.256	8.115	0.05216	0.19838
RegionR5	1.355	8.115	0.01396	0.07405
RegionR6	1.036	8.115	0.06636	0.48176
RegionR7	-0.025	8.115	0.96614	1.00000
RegionR8	-1.535	8.115	0.02772	0.32482

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.486	8.115	0.63453	1.00000
RegenerationR2	0.616	8.115	0.41700	0.82545
RegenerationR3	0.386	8.115	0.61320	0.91414
RegenerationR4	0.314	8.115	0.68988	0.94928
RegenerationR5	-0.358	8.115	0.63804	0.92593
RegenerationR6	-0.076	8.115	0.92048	1.00000
RegenerationBL	0.565	8.115	0.36327	0.73183
RegenerationTP	1.356	8.115	0.04997	0.36676

Genes with expression patterns similar to Mlig999032.1

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	Mlig999032.1						6	1.000	1.000	1.000	1.000	1.000	1.000
2.	MligTC455_29899	772	16.08	Mlig455_048977	Neo: - Age: -		1.683	-	-	-	0.954	0.729	-	Mlig455_048977 {REF} {Length: 3351} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=73.0]} {Smed: dd_Smed_v6_17939_1_1, dd_Smed_v6_17939_1_1, [RH, Score=89.7, Expect=1e-18]} {RNA1509_36423, RNA1509_42873} {RNA1310_11059.1, RNA1509_36423, RNA1509_42873} {RNA1509_36423, RNA1509_42873, RNA815_8111}
3.	MligTC455_44310	882	18.38	Mlig455_027494	Neo: - Age: - Region-enriched R5: 1.619/0.00000	RPUSD1	0.966	-	-	-	-	0.966	-	Mlig455_027494 {REF} {Length: 1294} {TRANSSPLICED} {Pfam: RNA pseudouridylate synthase [PF00849.24, score=68.9]} {Human: ENSG00000007376, RPUSD1, RNA pseudouridylate synthase domain containing 1, [RH, Score=176, Expect=6e-52]} {Mouse: ENSMUSG00000041199, Rpusd1, RNA pseudouridylate synthase domain containing 1, [RH, Score=182, Expect=9e-55]} {Celegans: WBGene00019498, K07E8.7, Pseudouridine synthase, [Score=61.6, Expect=3e-10]} {Smed: dd_Smed_v6_10006_0_1, dd_Smed_v6_10006_0_1, [RH, Score=172, Expect=3e-51]} {RNA1509_43724} {RNA1310_19796.1} {RNA815_11339.1}
4.	MligTC455_28718	705	14.7	Mlig455_064406	Neo: - Age: Up-Down-Down	NBEA	0.951	-	-	-	-	0.951	-	Mlig455_064406 {REF} {Length: 5538} {Pfam: Beige/BEACH domain [PF02138.20, score=402.3]; PH domain associated with Beige/BEACH [PF14844.8, score=61.1]; WD domain, G-beta repeat [PF00400.34, score=43.3]} {Human: ENSG00000172915, NBEA, neurobeachin, [RH, Score=887, Expect=0.0]} {Mouse: ENSMUSG00000027799, Nbea, neurobeachin, [Score=915, Expect=0.0]} {Dmel: FBgn0266098, rg, rugose, [Score=1054, Expect=0.0]} {Celegans: WBGene00004760, sel-2, Putative neurobeachin homolog, [Score=825, Expect=0.0]} {Smed: dd_Smed_v6_3880_0_1, dd_Smed_v6_3880_0_1, [Score=1006, Expect=0.0]} {RNA1509_10508, RNA1509_49991} {RNA1310_12428, RNA1509_49991} {RNA1509_49991, RNA815_4322}
5.	MligTC455_22166	449	9.36	Mlig455_011180, Mlig455_011209	Neo: - Age: logFC(26M/2M)=-0.276	TRPA1	0.95	-	-	-	-	-	0.950	Mlig455_011180 {REF} {Length: 6424} {Pfam: Ion transport protein [PF00520.33, score=49.9]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=84.0, Expect=1e-15]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=84.3, Expect=1e-15]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=99.8, Expect=1e-20]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=112, Expect=2e-24]} {Smed: dd_Smed_v6_12031_0_1, dd_Smed_v6_12031_0_1, [Score=59.7, Expect=4e-09]} {RNA1509_5546} {RNA1310_658, RNA1509_5546} {RNA1509_5546, RNA815_314.1} Mlig455_011209 {REF} {Length: 4870} {RNA1509_5546} {RNA1310_658} {RNA815_314.1}

Berezikov Lab - 2020-2021 © ERIBA