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Results for MligTC455_29920

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_29920 245 5.11 Mlig455_002738, Mlig455_021766, Mlig455_023067, Mlig455_032047, Mlig455_039756, Mlig455_047366, Mlig455_050597, Mlig455_056383, Mlig455_066006

Neo: -

Age: Down-Up-Down

 MAP1A

Mlig455_002738 {REF} {Length: 2676} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=55.5, Expect=9e-08]} {RNA1509_49065} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_021766 {REF} {Length: 3355} {Pfam: Tropomyosin like [PF12718.9, score=19.7]} {Human: ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=94.0, Expect=6e-19]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=107, Expect=4e-23]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=85.1, Expect=6e-17]} {RNA1509_32396, RNA1509_49065} {RNA1310_3059.1, RNA1509_49065} {RNA1509_49065, RNA815_7477.1}

Mlig455_023067 {REF} {Length: 1127} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=80.9, Expect=3e-16]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_032047 {REF} {Length: 2003} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=124, Expect=3e-29]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_1171.1}

Mlig455_039756 {REF} {Length: 2533} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=80.9, Expect=3e-16]} {RNA1509_49065} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_047366 {REF} {Length: 2417} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=106, Expect=5e-24]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_050597 {REF} {Length: 6588} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=70.1]; Integrase zinc binding domain [PF17921.3, score=27.6]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=2e-27]} {RNA1509_49462} {RNA1310_5233} {RNA815_7477.1}

Mlig455_056383 {REF} {Length: 758} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_066006 {REF} {Length: 2666} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=89.4, Expect=2e-18]} {RNA1509_31401} {RNA1310_3059.1} {RNA815_7477.1}

Cumulative graph for MligTC455_29920

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.782 3.003 0.63083 1.00000
RegionR2 0.473 3.003 0.63278 0.97292
RegionR3 1.439 3.003 0.15149 0.65891
RegionR4 1.049 3.003 0.35171 0.67346
RegionR5 -0.266 3.003 0.88818 1.00000
RegionR6 -0.007 3.003 0.81050 1.00000
RegionR7 1.72 3.003 0.10360 0.61227
RegionR8 -5.191 3.003 0.11021 0.61672

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.156 3.003 0.69633 1.00000
RegenerationR2 0.825 3.003 0.39195 0.80907
RegenerationR3 -0.28 3.003 0.77047 0.97174
RegenerationR4 -0.61 3.003 0.57380 0.90327
RegenerationR5 1.361 3.003 0.17519 0.60450
RegenerationR6 1.2 3.003 0.27581 0.62492
RegenerationBL -1.584 3.003 0.96526 1.00000
RegenerationTP 2.195 3.003 0.30444 0.74979


Genes with expression patterns similar to MligTC455_29920

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_29920 245 5.11 Mlig455_002738, Mlig455_021766, Mlig455_023067, Mlig455_032047, Mlig455_039756, Mlig455_047366, Mlig455_050597, Mlig455_056383, Mlig455_066006

Neo: -

Age: Down-Up-Down

 MAP1A 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_002738 {REF} {Length: 2676} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=55.5, Expect=9e-08]} {RNA1509_49065} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_021766 {REF} {Length: 3355} {Pfam: Tropomyosin like [PF12718.9, score=19.7]} {Human: ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=94.0, Expect=6e-19]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=107, Expect=4e-23]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=85.1, Expect=6e-17]} {RNA1509_32396, RNA1509_49065} {RNA1310_3059.1, RNA1509_49065} {RNA1509_49065, RNA815_7477.1}

Mlig455_023067 {REF} {Length: 1127} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=80.9, Expect=3e-16]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_032047 {REF} {Length: 2003} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=124, Expect=3e-29]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_1171.1}

Mlig455_039756 {REF} {Length: 2533} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=80.9, Expect=3e-16]} {RNA1509_49065} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_047366 {REF} {Length: 2417} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=106, Expect=5e-24]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_050597 {REF} {Length: 6588} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=70.1]; Integrase zinc binding domain [PF17921.3, score=27.6]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=2e-27]} {RNA1509_49462} {RNA1310_5233} {RNA815_7477.1}

Mlig455_056383 {REF} {Length: 758} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_066006 {REF} {Length: 2666} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=89.4, Expect=2e-18]} {RNA1509_31401} {RNA1310_3059.1} {RNA815_7477.1}
2. MligTC455_29949 124 2.59 Mlig455_002750, Mlig455_017319, Mlig455_032071, Mlig455_036206, Mlig455_044935

Neo: -

Age: Up-Down-Down

 4.761 0.983 - 0.981 0.859 0.968 0.970

Mlig455_002750 {REF} {Length: 2824} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.6]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=107, Expect=1e-24]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_017319 {REF} {Length: 3437} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=126, Expect=8e-30]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_032071 {REF} {Length: 758} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_036206 {REF} {Length: 3303} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=130, Expect=9e-31]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1}

Mlig455_044935 {REF} {Length: 2819} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=125, Expect=2e-29]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_1171.1}
3. MligTC455_44256 289 6.02 Mlig455_019199

Neo: -

Age: -

 1.734 - - - - 0.960 0.774 Mlig455_019199 {REF} {Length: 1379} {RNA1509_45436} {RNA1310_46798.1} {RNA815_22471}
4. MligTC455_28656 562 11.7 Mlig455_054734

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=-0.388

Region-specific R4: 5.528

Region-enriched R4: 2.398/0.01738

 SCNN1B 1.712 - 0.762 - 0.950 - - Mlig455_054734 {REF} {Length: 2972} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=73.6]} {Human: ENSG00000168447, SCNN1B, sodium channel epithelial 1 beta subunit, [Score=55.1, Expect=2e-07]} {Mouse: ENSMUSG00000000216, Scnn1g, sodium channel, nonvoltage-gated 1 gamma, [Score=54.7, Expect=2e-07]} {RNA1509_47645} {RNA1310_33504} {RNA815_9471.1}
5. MligTC455_28824 206 4.29 Mlig455_041255, Mlig455_053082

Neo: -

Age: Down-Up-Up

 1.666 0.715 - 0.951 - - -

Mlig455_041255 {REF} {Length: 5742} {RNA1509_43701, RNA1509_46213, RNA1509_5701} {RNA1310_17623, RNA1509_43701, RNA1509_46213} {RNA1509_43701, RNA1509_46213, RNA815_453.1}

Mlig455_053082 {REF} {Length: 3199} {RNA1509_5701} {RNA1310_17623} {RNA815_453.1}
6. MligTC455_25520 62 1.29 Mlig455_013778, Mlig455_013901

Neo: -

Age: -

 0.962 - - - - 0.962 -

Mlig455_013778 {REF} {Length: 1889} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=23.9]} {RNA1509_30261} {RNA1310_55488} {RNA815_57771}

Mlig455_013901 {REF} {Length: 1805} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=23.9]} {RNA1509_30261} {RNA1310_55488} {RNA815_57771}
7. MligTC455_38577 53 1.1 Mlig455_039955, Mlig455_039969

Neo: -

Age: -

 0.961 - - - - 0.961 -

Mlig455_039955 {REF} {Length: 1584} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576}

Mlig455_039969 {REF} {Length: 462} {NoTransDecoderORF} {RNA1310_21615.2}
8. MligTC455_35593 107 2.23 Mlig455_062186

Neo: -

Age: -

 0.954 - - - 0.954 - - Mlig455_062186 {REF} {Length: 1785} {RNA1509_33655} {RNA1310_17820.1} {RNA815_11646}

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