Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_44256 | 289 | 6.02 | Mlig455_019199 | Neo: - Age: - |
Mlig455_019199 {REF} {Length: 1379} {RNA1509_45436} {RNA1310_46798.1} {RNA815_22471} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | 0.482 | 3.085 | 0.70196 | 1.00000 | |
RegionR2 | -0.251 | 3.085 | 0.66240 | 0.99356 | |
RegionR3 | 0.249 | 3.085 | 0.56546 | 1.00000 | |
RegionR4 | 0.129 | 3.085 | 0.81378 | 1.00000 | |
RegionR5 | 0.236 | 3.085 | 0.56174 | 0.92095 | |
RegionR6 | 0.245 | 3.085 | 0.58975 | 1.00000 | |
RegionR7 | -0.012 | 3.085 | 0.98061 | 1.00000 | |
RegionR8 | -1.079 | 3.085 | 0.19301 | 0.78657 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | -6.434 | 3.085 | 0.15376 | 0.89609 | |
RegenerationR2 | -0.219 | 3.085 | 0.65237 | 0.93728 | |
RegenerationR3 | -0.753 | 3.085 | 0.15893 | 0.59097 | |
RegenerationR4 | -0.858 | 3.085 | 0.13758 | 0.55813 | |
RegenerationR5 | -0.221 | 3.085 | 0.64100 | 0.92734 | |
RegenerationR6 | -0.175 | 3.085 | 0.74755 | 0.95095 | |
RegenerationBL | -1.172 | 3.085 | 0.18399 | 0.51415 | |
RegenerationTP | 0.273 | 3.085 | 0.71589 | 1.00000 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_44256 | 289 | 6.02 | Mlig455_019199 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019199 {REF} {Length: 1379} {RNA1509_45436} {RNA1310_46798.1} {RNA815_22471} | |
2. | MligTC455_26102 | 81 | 1.68 | Mlig455_036981 | Neo: Irradiation Age: logFC(26M/2M)=-0.711 |
2.557 | - | - | 0.965 | - | 0.886 | 0.706 | Mlig455_036981 {REF} {Length: 2593} {RNA1509_51525} {RNA1310_9237.1} {RNA815_5309} | |
3. | MligTC455_39857 | 27 | 0.55 | Mlig455_037127 | Neo: - Age: Down-Down-Down |
NECAB1 | 1.755 | - | - | 0.800 | - | 0.955 | - | Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367} |
4. | MligTC455_29920 | 245 | 5.11 | Mlig455_002738, Mlig455_021766, Mlig455_023067, Mlig455_032047, Mlig455_039756, Mlig455_047366, Mlig455_050597, Mlig455_056383, Mlig455_066006 | Neo: - Age: Down-Up-Down |
MAP1A | 1.734 | - | - | - | - | 0.960 | 0.774 | Mlig455_002738 {REF} {Length: 2676} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=55.5, Expect=9e-08]} {RNA1509_49065} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_021766 {REF} {Length: 3355} {Pfam: Tropomyosin like [PF12718.9, score=19.7]} {Human: ENSG00000166963, MAP1A, microtubule associated protein 1A, [Score=94.0, Expect=6e-19]} {Mouse: ENSMUSG00000025272, Tro, trophinin, [Score=107, Expect=4e-23]} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=85.1, Expect=6e-17]} {RNA1509_32396, RNA1509_49065} {RNA1310_3059.1, RNA1509_49065} {RNA1509_49065, RNA815_7477.1} Mlig455_023067 {REF} {Length: 1127} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=80.9, Expect=3e-16]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_032047 {REF} {Length: 2003} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=124, Expect=3e-29]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_1171.1} Mlig455_039756 {REF} {Length: 2533} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=80.9, Expect=3e-16]} {RNA1509_49065} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_047366 {REF} {Length: 2417} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=106, Expect=5e-24]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_050597 {REF} {Length: 6588} {Pfam: RNase H-like domain found in reverse transcriptase [PF17917.3, score=102.4]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=70.1]; Integrase zinc binding domain [PF17921.3, score=27.6]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=117, Expect=2e-27]} {RNA1509_49462} {RNA1310_5233} {RNA815_7477.1} Mlig455_056383 {REF} {Length: 758} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_066006 {REF} {Length: 2666} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=89.4, Expect=2e-18]} {RNA1509_31401} {RNA1310_3059.1} {RNA815_7477.1} |
5. | MligTC455_29949 | 124 | 2.59 | Mlig455_002750, Mlig455_017319, Mlig455_032071, Mlig455_036206, Mlig455_044935 | Neo: - Age: Up-Down-Down |
1.707 | - | - | - | - | 0.957 | 0.750 | Mlig455_002750 {REF} {Length: 2824} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=18.6]} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=107, Expect=1e-24]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_017319 {REF} {Length: 3437} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=126, Expect=8e-30]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_032071 {REF} {Length: 758} {Smed: dd_Smed_v6_129_2_2, dd_Smed_v6_129_2_2, [Score=105, Expect=5e-23]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_036206 {REF} {Length: 3303} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=130, Expect=9e-31]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_7477.1} Mlig455_044935 {REF} {Length: 2819} {Smed: dd_Smed_v6_129_2_1, dd_Smed_v6_129_2_1, [Score=125, Expect=2e-29]} {RNA1509_32396} {RNA1310_3059.1} {RNA815_1171.1} |
|
6. | MligTC455_18784 | 461 | 9.59 | Mlig455_011302, Mlig455_011391 | Neo: Int S/G2/M Age: - |
CLIC6 | 1.664 | 0.712 | - | 0.952 | - | - | - | Mlig455_011302 {REF} {Length: 1564} {Human: ENSG00000159212, CLIC6, chloride intracellular channel 6, [Score=61.2, Expect=3e-10]} {RNA1509_15142} {RNA1310_50653} {RNA815_35348} Mlig455_011391 {REF} {Length: 1551} {Human: ENSG00000159212, CLIC6, chloride intracellular channel 6, [Score=61.2, Expect=3e-10]} {RNA1509_15142} {RNA1310_50653} {RNA815_35348} |
7. | MligTC455_38577 | 53 | 1.1 | Mlig455_039955, Mlig455_039969 | Neo: - Age: - |
0.987 | - | - | - | - | 0.987 | - | Mlig455_039955 {REF} {Length: 1584} {Pfam: Protein phosphatase inhibitor 2 (IPP-2) [PF04979.16, score=21.3]} {RNA1310_21615.2} {RNA815_35576} Mlig455_039969 {REF} {Length: 462} {NoTransDecoderORF} {RNA1310_21615.2} |
|
8. | MligTC455_41825 | 687 | 14.31 | Mlig455_024304, Mlig455_024359 | Neo: - Age: Down-Up-Down Region-enriched R2: 2.350/0.02887 |
0.972 | - | - | - | - | 0.972 | - | Mlig455_024304 {REF} {Length: 1854} {TRANSSPLICED} {RNA1509_48745} {RNA1310_27046} {RNA815_24708} Mlig455_024359 {REF} {Length: 2019} {RNA1509_48745} {RNA1310_27046} {RNA815_24708} |
|
9. | MligTC455_05174 | 15 | 0.3 | Mlig455_040060 | Neo: - Age: - |
ANGPTL6 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_040060 {REF} {Length: 1046} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.3]} {Human: ENSG00000130812, ANGPTL6, angiopoietin like 6, [Score=96.7, Expect=7e-22]; ENSG00000160339, FCN2, ficolin 2, [Score=95.9, Expect=2e-22]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=93.6, Expect=3e-21]} {Mouse: ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=94.0, Expect=4e-21]; ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=94.0, Expect=1e-21]} {Dmel: FBgn0050280, CG30280, [Score=91.7, Expect=2e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=99.4, Expect=3e-23]} {RNA1509_54507} {RNA1310_27399} {RNA815_12335} |
10. | MligTC455_05175 | 15 | 0.31 | Mlig455_040087 | Neo: - Age: - |
FCN2 | 0.965 | - | - | 0.965 | - | - | - | Mlig455_040087 {REF} {Length: 1203} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=103.7]} {Human: ENSG00000160339, FCN2, ficolin 2, [Score=94.7, Expect=2e-22]; ENSG00000130812, ANGPTL6, angiopoietin like 6, [Score=94.7, Expect=2e-21]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=94.0, Expect=2e-21]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=92.4, Expect=3e-21]; ENSMUSG00000038742, Angptl6, angiopoietin-like 6, [Score=92.4, Expect=8e-21]} {Dmel: FBgn0050280, CG30280, [Score=90.1, Expect=6e-21]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=99.8, Expect=2e-23]} {RNA1509_54507} {RNA1310_27399} {RNA815_12335} |
11. | MligTC455_34574 | 74 | 1.54 | Mlig455_017921, Mlig455_054571 | Neo: - Age: - |
0.959 | - | - | - | - | 0.959 | - | Mlig455_017921 {REF} {Length: 1973} {Pfam: F-box-like [PF12937.9, score=41.8]; F-box domain [PF00646.35, score=39.7]} {RNA1509_43266} {RNA1310_25349.1} {RNA815_55842} Mlig455_054571 {REF} {Length: 1950} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=41.7]; F-box domain [PF00646.35, score=39.7]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=49.3, Expect=3e-06]} {RNA1509_43266} {RNA1310_25349.1} {RNA815_55842} |
|
12. | MligTC455_36699 | 52 | 1.09 | Mlig455_013206, Mlig455_057823 | Neo: - Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_013206 {REF} {Length: 1829} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=64.1]} {Celegans: WBGene00007723, C25F9.2, [Score=206, Expect=2e-57]} {RNA1310_7131} {RNA815_8935} Mlig455_057823 {REF} {Length: 2071} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=22.0]} {Celegans: WBGene00007723, C25F9.2, [Score=83.2, Expect=7e-20]} {RNA1509_284} {RNA1310_7131} {RNA815_8935} |
|
13. | MligTC455_25948 | 26 | 0.53 | Mlig455_020747 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_020747 {REF} {Length: 891} {TRANSSPLICED} {RNA1509_54816} {RNA1310_68154} {RNA815_23085.1} | |
14. | MligTC455_25520 | 62 | 1.29 | Mlig455_013778, Mlig455_013901 | Neo: - Age: - |
0.955 | - | - | - | - | 0.955 | - | Mlig455_013778 {REF} {Length: 1889} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=23.9]} {RNA1509_30261} {RNA1310_55488} {RNA815_57771} Mlig455_013901 {REF} {Length: 1805} {Pfam: Collagen triple helix repeat (20 copies) [PF01391.20, score=23.9]} {RNA1509_30261} {RNA1310_55488} {RNA815_57771} |
|
15. | MligTC455_08031 | 24 | 0.51 | Mlig455_012963 | Neo: - Age: - |
ZAN | 0.953 | - | - | - | - | 0.953 | - | Mlig455_012963 {REF} {Length: 2088} {Pfam: Cyclic nucleotide-binding domain [PF00027.31, score=48.4]; PT repeat [PF04886.14, score=36.2]} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.0, Expect=1e-07]} {Mouse: ENSMUSG00000038085, Cnbd2, cyclic nucleotide binding domain containing 2, [Score=63.9, Expect=3e-10]} {Dmel: FBgn0029807, CG3108, [Score=63.2, Expect=5e-10]} {Smed: dd_Smed_v6_19613_0_1, dd_Smed_v6_19613_0_1, [Score=131, Expect=3e-33]} {RNA1509_10570} {RNA1310_7155.1} {RNA815_1910.1} |
16. | MligTC455_25997 | 236 | 4.92 | Mlig455_069262 | Neo: - Age: - Region-enriched R5: 1.777/0.04733 |
0.953 | - | - | 0.953 | - | - | - | Mlig455_069262 {REF} {Length: 4569} {TRANSSPLICED} {RNA1509_54304, RNA1509_56297} {RNA1310_24884, RNA1509_54304, RNA1509_56297} {RNA1509_54304, RNA1509_56297, RNA815_13578} | |
17. | MligTC455_52196 | 902 | 18.79 | Mlig455_058288 | Neo: Irradiation Age: - Regeneration-depleted BL: -2.377 |
0.953 | - | - | - | - | - | 0.953 | Mlig455_058288 {REF} {Length: 1745} {RNA1509_45448} {RNA1310_10531.1} {RNA815_1622} | |
18. | MligTC455_46422 | 232 | 4.83 | Mlig455_008532 | Neo: Irradiation Age: - Region-enriched R5: 1.995/0.04833 |
ZNF358 | 0.95 | - | - | 0.950 | - | - | - | Mlig455_008532 {REF} {Length: 3575} {Pfam: C2H2-type zinc finger [PF13894.8, score=72.8]; Zinc finger, C2H2 type [PF00096.28, score=59.5]; Zinc-finger double domain [PF13465.8, score=37.4]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=33.9]} {Human: ENSG00000198816, ZNF358, zinc finger protein 358, [Score=103, Expect=4e-22]; ENSG00000175213, ZNF408, zinc finger protein 408, [Score=98.2, Expect=4e-20]} {Mouse: ENSMUSG00000075040, Zfp408, zinc finger protein 408, [Score=110, Expect=3e-24]} {Dmel: FBgn0020309, crol, crooked legs, [Score=109, Expect=5e-24]} {Celegans: WBGene00019751, M03D4.4, [Score=75.9, Expect=5e-14]} {Smed: dd_Smed_v6_9443_0_1, dd_Smed_v6_9443_0_1, [RH, Score=119, Expect=3e-27]} {RNA1509_12398} {RNA1310_10410} {RNA815_9727} |