Data search
Results for MligTC455_29944
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29944 | 298 | 6.21 | Mlig455_051629 | Neo: - Age: - |
DDX58 | Mlig455_051629 {REF} {Length: 5447} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=70.3]; Integrase zinc binding domain [PF17921.3, score=64.0]; Helicase conserved C-terminal domain [PF00271.33, score=54.6]; Integrase core domain [PF00665.28, score=54.6]; DEAD/DEAH box helicase [PF00270.31, score=49.7]; C-terminal domain of RIG-I [PF11648.10, score=40.5]; SWI2/SNF2 ATPase [PF18766.3, score=30.3]; H2C2 zinc finger [PF09337.12, score=19.8]; Integrase core domain [PF13683.8, score=18.3]} {Human: ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=170, Expect=3e-42]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=157, Expect=9e-39]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=61.6, Expect=7e-09]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=113, Expect=4e-25]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [Score=219, Expect=7e-58]} {RNA1509_9178} {RNA1310_2530.1} {RNA815_790.1} |
Cumulative graph for MligTC455_29944
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.077 | 3.194 | 0.95177 | 1.00000 | |
| RegionR2 | 0.643 | 3.194 | 0.31517 | 0.70636 | |
| RegionR3 | 0.505 | 3.194 | 0.30974 | 0.84888 | |
| RegionR4 | 0.132 | 3.194 | 0.81745 | 1.00000 | |
| RegionR5 | 0.115 | 3.194 | 0.79747 | 1.00000 | |
| RegionR6 | 0.205 | 3.194 | 0.69096 | 1.00000 | |
| RegionR7 | 0.224 | 3.194 | 0.74160 | 1.00000 | |
| RegionR8 | -1.901 | 3.194 | 0.11109 | 0.61898 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.951 | 3.194 | 0.22188 | 0.95604 | |
| RegenerationR2 | -0.025 | 3.194 | 0.96138 | 1.00000 | |
| RegenerationR3 | 0.004 | 3.194 | 0.99453 | 1.00000 | |
| RegenerationR4 | -0.353 | 3.194 | 0.53866 | 0.88805 | |
| RegenerationR5 | 0.606 | 3.194 | 0.21605 | 0.65084 | |
| RegenerationR6 | -0.032 | 3.194 | 0.95674 | 1.00000 | |
| RegenerationBL | 0.983 | 3.194 | 0.21257 | 0.55671 | |
| RegenerationTP | 0.504 | 3.194 | 0.61547 | 0.96983 |
Genes with expression patterns similar to MligTC455_29944
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29944 | 298 | 6.21 | Mlig455_051629 | Neo: - Age: - |
DDX58 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_051629 {REF} {Length: 5447} {Pfam: Type III restriction enzyme, res subunit [PF04851.17, score=70.3]; Integrase zinc binding domain [PF17921.3, score=64.0]; Helicase conserved C-terminal domain [PF00271.33, score=54.6]; Integrase core domain [PF00665.28, score=54.6]; DEAD/DEAH box helicase [PF00270.31, score=49.7]; C-terminal domain of RIG-I [PF11648.10, score=40.5]; SWI2/SNF2 ATPase [PF18766.3, score=30.3]; H2C2 zinc finger [PF09337.12, score=19.8]; Integrase core domain [PF13683.8, score=18.3]} {Human: ENSG00000107201, DDX58, DExD/H-box helicase 58, [Score=170, Expect=3e-42]} {Mouse: ENSMUSG00000040296, Ddx58, DEAD (Asp-Glu-Ala-Asp) box polypeptide 58, [Score=157, Expect=9e-39]} {Dmel: FBgn0039016, Dcr-1, Dicer-1, [Score=61.6, Expect=7e-09]} {Celegans: WBGene00001090, drh-1, Dicer Related Helicase; Dicer-related helicase, [Score=113, Expect=4e-25]} {Smed: dd_Smed_v6_3742_0_1, dd_Smed_v6_3742_0_1, [Score=219, Expect=7e-58]} {RNA1509_9178} {RNA1310_2530.1} {RNA815_790.1} |
| 2. | MligTC455_46178 | 728 | 15.18 | Mlig455_003648, Mlig455_003855 | Neo: - Age: - |
ANK3 | 1.809 | - | - | - | - | 0.968 | 0.841 | Mlig455_003648 {REF} {Length: 3371} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=58.5]; Ankyrin repeat [PF13606.8, score=51.7]; Ankyrin repeats (many copies) [PF13637.8, score=50.9]; Ankyrin repeat [PF00023.32, score=46.5]; Ankyrin repeats (many copies) [PF13857.8, score=33.5]; SOCS box [PF07525.18, score=26.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=55.1, Expect=6e-07]; ENSG00000145362, ANK2, ankyrin 2, [Score=53.1, Expect=3e-06]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=52.4, Expect=3e-06]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=55.5, Expect=3e-07]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=52.8, Expect=2e-06]} {Dmel: FBgn0035270, CG13933, [RH, Score=110, Expect=1e-24]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=58.2, Expect=3e-08]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=51.2, Expect=3e-06]} {RNA1509_7175} {RNA1310_4828.1} {RNA815_5811} Mlig455_003855 {REF} {Length: 4359} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=58.5]; Ankyrin repeat [PF13606.8, score=52.0]; Ankyrin repeats (many copies) [PF13637.8, score=50.8]; Ankyrin repeat [PF00023.32, score=46.5]; Ankyrin repeats (many copies) [PF13857.8, score=33.3]; SOCS box [PF07525.18, score=26.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=57.0, Expect=2e-07]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=57.4, Expect=8e-08]} {Dmel: FBgn0035270, CG13933, [RH, Score=111, Expect=5e-25]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=57.4, Expect=4e-08]} {Smed: dd_Smed_v6_3523_0_1, dd_Smed_v6_3523_0_1, [Score=51.2, Expect=2e-06]} {RNA1509_7175} {RNA1310_4828.1} {RNA815_5811} |
| 3. | MligTC455_19603 | 707 | 14.74 | Mlig455_056946 | Neo: - Age: - |
SPG11 | 1.764 | - | - | - | - | 0.963 | 0.801 | Mlig455_056946 {REF} {Length: 5169} {Pfam: Spatacsin C-terminus [PF14649.8, score=86.2]} {Human: ENSG00000104133, SPG11, SPG11, spatacsin vesicle trafficking associated, [RH, Score=77.4, Expect=1e-13]} {Mouse: ENSMUSG00000033396, Spg11, SPG11, spatacsin vesicle trafficking associated, [RH, Score=78.6, Expect=7e-14]} {RNA1509_13653, RNA1509_47896, RNA1509_53456} {RNA1310_1096.1, RNA1509_13653, RNA1509_47896, RNA1509_53456} {RNA1509_13653, RNA1509_47896, RNA1509_53456, RNA815_16392} |
| 4. | MligTC455_52446 | 827 | 17.23 | Mlig455_035295 | Neo: - Age: - |
GLS | 1.705 | - | - | 0.754 | - | - | 0.951 | Mlig455_035295 {REF} {Length: 3921} {TRANSSPLICED} {Pfam: Glutaminase [PF04960.17, score=391.6]; EF-hand domain [PF17959.3, score=65.7]; Ankyrin repeats (3 copies) [PF12796.9, score=41.9]; Ankyrin repeats (many copies) [PF13637.8, score=38.9]; Ankyrin repeat [PF00023.32, score=24.4]; Ankyrin repeat [PF13606.8, score=19.7]; Ankyrin repeats (many copies) [PF13857.8, score=18.9]} {Human: ENSG00000115419, GLS, glutaminase, [RH, Score=591, Expect=0.0]; ENSG00000135423, GLS2, glutaminase 2, [RH, Score=582, Expect=0.0]} {Mouse: ENSMUSG00000026103, Gls, glutaminase, [RH, Score=591, Expect=0.0]; ENSMUSG00000044005, Gls2, glutaminase 2 (liver, mitochondrial), [RH, Score=582, Expect=0.0]} {Dmel: FBgn0261625, GLS, Glutaminase, [RH, Score=612, Expect=0.0]} {Celegans: WBGene00008435, glna-2, Putative glutaminase 2, [RH, Score=554, Expect=0.0]} {Smed: dd_Smed_v6_15097_0_1, dd_Smed_v6_15097_0_1, [RH, Score=512, Expect=7e-178]} {RNA1509_46187, RNA1509_5599} {RNA1310_10945, RNA1509_46187, RNA1509_5599} {RNA1509_46187, RNA1509_5599, RNA815_3847.1} |
| 5. | MligTC455_32493 | 777 | 16.2 | Mlig455_022632 | Neo: - Age: - Region-enriched R5: 1.296/0.01419 |
1.695 | - | - | - | - | 0.961 | 0.734 | Mlig455_022632 {REF} {Length: 224} {NoTransDecoderORF} {RNA1509_16305} {RNA1310_27778.1} {RNA815_7035} | |
| 6. | MligTC455_30818 | 71 | 1.48 | Mlig455_013032 | Neo: - Age: - |
0.968 | - | - | - | - | 0.968 | - | Mlig455_013032 {REF} {Length: 1090} {TRANSSPLICED} {RNA1509_38085} {RNA1310_25316.2} {RNA815_12860} | |
| 7. | MligTC455_30708 | 801 | 16.68 | Mlig455_029611 | Neo: Germline Age: - |
ALDH18A1 | 0.957 | - | - | - | - | 0.957 | - | Mlig455_029611 {REF} {Length: 2935} {TRANSSPLICED} {Pfam: Amino acid kinase family [PF00696.30, score=136.1]; Aldehyde dehydrogenase family [PF00171.24, score=55.9]} {Human: ENSG00000059573, ALDH18A1, aldehyde dehydrogenase 18 family member A1, [RH, Score=845, Expect=0.0]} {Mouse: ENSMUSG00000025007, Aldh18a1, aldehyde dehydrogenase 18 family, member A1, [RH, Score=858, Expect=0.0]} {Dmel: FBgn0037146, CG7470, [RH, Score=809, Expect=0.0]} {Celegans: WBGene00011938, alh-13, Probable delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase, [RH, Score=810, Expect=0.0]} {Smed: dd_Smed_v6_1060_0_1, dd_Smed_v6_1060_0_1, [RH, Score=908, Expect=0.0]} {RNA1509_1671} {RNA1310_2413} {RNA815_1917} |
| 8. | MligTC455_42960 | 364 | 7.58 | Mlig455_029241, Mlig455_035628 | Neo: - Age: - |
0.955 | - | - | - | - | - | 0.955 | Mlig455_029241 {REF} {Length: 3074} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=20.1]} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=58.9, Expect=7e-09]} {RNA1509_32779} {RNA1310_20140} {RNA815_11665} Mlig455_035628 {REF} {Length: 2813} {TRANSSPLICED} {Pfam: Major Facilitator Superfamily [PF07690.18, score=19.0]} {Mouse: ENSMUSG00000038522, Mfsd4b1, major facilitator superfamily domain containing 4B1, [Score=56.6, Expect=3e-08]} {RNA1509_32779, RNA1509_46364} {RNA1310_20140, RNA1509_32779, RNA1509_46364} {RNA1509_32779, RNA1509_46364, RNA815_11665} |
|
| 9. | MligTC455_24321 | 285 | 5.94 | Mlig455_018579 | Neo: Int S/G2/M Age: - |
ANKMY2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_018579 {REF} {Length: 2256} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=49.6]; Ankyrin repeats (many copies) [PF13637.8, score=37.2]; MYND finger [PF01753.20, score=32.0]; Ankyrin repeat [PF13606.8, score=31.2]; Ankyrin repeat [PF00023.32, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=26.8]} {Human: ENSG00000106524, ANKMY2, ankyrin repeat and MYND domain containing 2, [RH, Score=254, Expect=2e-78]} {Mouse: ENSMUSG00000036188, Ankmy2, ankyrin repeat and MYND domain containing 2, [RH, Score=251, Expect=4e-77]} {Dmel: FBgn0036096, CG8003, [RH, Score=191, Expect=4e-55]} {Celegans: WBGene00000917, daf-25, Dauer abnormal formation protein 25, [RH, Score=137, Expect=2e-35]} {Smed: dd_Smed_v6_5921_0_2, dd_Smed_v6_5921_0_2, [RH, Score=232, Expect=8e-71]} {RNA1509_31086} {RNA1310_13185} {RNA815_18603} |
| 10. | MligTC455_32794 | 550 | 11.46 | Mlig455_022149 | Neo: - Age: Up-Down-Down |
RBM4B | 0.952 | - | - | - | - | - | 0.952 | Mlig455_022149 {REF} {Length: 6473} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=37.2]; Unstructured region C-term to UIM in Ataxin3 [PF16619.7, score=20.9]} {Human: ENSG00000173914, RBM4B, RNA binding motif protein 4B, [RH, Score=71.6, Expect=1e-14]; ENSG00000173933, RBM4, RNA binding motif protein 4, [RH, Score=71.6, Expect=2e-14]; ENSG00000239306, RBM14, RNA binding motif protein 14, [RH, Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000094936, Rbm4, RNA binding motif protein 4, [RH, Score=71.6, Expect=9e-15]; ENSMUSG00000033760, Rbm4b, RNA binding motif protein 4B, [RH, Score=71.6, Expect=9e-15]; ENSMUSG00000006456, Rbm14, RNA binding motif protein 14, [RH, Score=70.9, Expect=5e-13]} {Celegans: WBGene00004384, rnp-1, RNA-binding protein rnp-1, [Score=50.8, Expect=5e-07]} {Smed: dd_Smed_v6_14010_0_1, dd_Smed_v6_14010_0_1, [Score=49.3, Expect=2e-06]} {RNA1509_22494, RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650} {RNA1310_8274.1, RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650} {RNA1509_28767, RNA1509_44258, RNA1509_48912, RNA1509_50650, RNA815_8688.1} |
| 11. | MligTC455_33866 | 390 | 8.13 | Mlig455_005035 | Neo: - Age: - |
MED13 | 0.952 | - | - | - | - | - | 0.952 | Mlig455_005035 {REF} {Length: 6760} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=50.9]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=8e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=177, Expect=4e-44]} {RNA1509_5621} {RNA1310_887} {RNA815_2444} |
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