Data search
Results for MligTC455_29988
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_29988 | 287 | 5.99 | Mlig455_040870 | Neo: - Age: Down-Down-Up |
MAP3K19 | Mlig455_040870 {REF} {Length: 2755} {Pfam: Protein kinase domain [PF00069.27, score=157.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.4]; Ankyrin repeats (3 copies) [PF12796.9, score=76.0]; Ankyrin repeats (many copies) [PF13637.8, score=49.7]; Ankyrin repeats (many copies) [PF13857.8, score=48.6]; Ankyrin repeat [PF13606.8, score=48.0]; Ankyrin repeat [PF00023.32, score=45.6]; Fungal protein kinase [PF17667.3, score=25.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=127, Expect=2e-30]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=5e-29]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=122, Expect=4e-28]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=118, Expect=7e-27]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=116, Expect=2e-26]} {Dmel: FBgn0024329, Mekk1, [Score=122, Expect=3e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_3286_0_8, dd_Smed_v6_3286_0_8, [Score=105, Expect=3e-24]} {RNA1509_27731, RNA1509_42274} {RNA1310_10050, RNA1509_42274} {RNA1509_42274, RNA815_9449.1} |
Cumulative graph for MligTC455_29988
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.437 | 3.117 | 0.82017 | 1.00000 | |
| RegionR2 | -0.372 | 3.117 | 0.55661 | 0.92025 | |
| RegionR3 | -0.236 | 3.117 | 0.69070 | 1.00000 | |
| RegionR4 | 1.17 | 3.117 | 0.06918 | 0.24022 | |
| RegionR5 | 0.281 | 3.117 | 0.58805 | 0.94625 | |
| RegionR6 | 0.337 | 3.117 | 0.53694 | 1.00000 | |
| RegionR7 | -1.139 | 3.117 | 0.24789 | 0.87328 | |
| RegionR8 | 0.396 | 3.117 | 0.71851 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -5.626 | 3.117 | 0.33822 | 1.00000 | |
| RegenerationR2 | 0.168 | 3.117 | 0.68058 | 0.94903 | |
| RegenerationR3 | 0.173 | 3.117 | 0.74420 | 0.96218 | |
| RegenerationR4 | 0.057 | 3.117 | 0.91081 | 1.00000 | |
| RegenerationR5 | 0.408 | 3.117 | 0.37358 | 0.78286 | |
| RegenerationR6 | -0.232 | 3.117 | 0.63879 | 0.89241 | |
| RegenerationBL | 0.508 | 3.117 | 0.45273 | 0.81977 | |
| RegenerationTP | 0.555 | 3.117 | 0.51280 | 0.90986 |
Genes with expression patterns similar to MligTC455_29988
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_29988 | 287 | 5.99 | Mlig455_040870 | Neo: - Age: Down-Down-Up |
MAP3K19 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040870 {REF} {Length: 2755} {Pfam: Protein kinase domain [PF00069.27, score=157.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.4]; Ankyrin repeats (3 copies) [PF12796.9, score=76.0]; Ankyrin repeats (many copies) [PF13637.8, score=49.7]; Ankyrin repeats (many copies) [PF13857.8, score=48.6]; Ankyrin repeat [PF13606.8, score=48.0]; Ankyrin repeat [PF00023.32, score=45.6]; Fungal protein kinase [PF17667.3, score=25.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=127, Expect=2e-30]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=5e-29]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=122, Expect=4e-28]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=118, Expect=7e-27]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=116, Expect=2e-26]} {Dmel: FBgn0024329, Mekk1, [Score=122, Expect=3e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_3286_0_8, dd_Smed_v6_3286_0_8, [Score=105, Expect=3e-24]} {RNA1509_27731, RNA1509_42274} {RNA1310_10050, RNA1509_42274} {RNA1509_42274, RNA815_9449.1} |
| 2. | MligTC455_31047 | 265 | 5.53 | Mlig455_016720 | Neo: - Age: - |
1.894 | 0.963 | - | - | - | 0.931 | - | Mlig455_016720 {REF} {Length: 449} {RNA1509_13348} {RNA1310_46678} {RNA815_21464} | |
| 3. | MligTC455_39039 | 274 | 5.7 | Mlig455_026563 | Neo: - Age: - Region-enriched R5: 1.645/0.03505 |
LAMTOR1 | 1.796 | 0.953 | - | - | - | - | 0.843 | Mlig455_026563 {REF} {Length: 3043} {TRANSSPLICED} {Pfam: Late endosomal/lysosomal adaptor and MAPK and MTOR activator [PF15454.8, score=20.2]} {Human: ENSG00000149357, LAMTOR1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, [Score=45.4, Expect=9e-06]} {Mouse: ENSMUSG00000030842, Lamtor1, late endosomal/lysosomal adaptor, MAPK and MTOR activator 1, [Score=48.1, Expect=7e-07]} {RNA1509_34492} {RNA1310_43726.1, RNA1509_34492} {RNA1509_34492, RNA815_11657.1} |
| 4. | MligTC455_25762 | 513 | 10.68 | Mlig455_016742 | Neo: - Age: - |
LAMB1 | 1.705 | 0.951 | - | - | - | 0.754 | - | Mlig455_016742 {REF} {Length: 6107} {Pfam: Laminin EGF domain [PF00053.26, score=205.7]; Tropomyosin like [PF12718.9, score=19.1]} {Human: ENSG00000091136, LAMB1, laminin subunit beta 1, [Score=428, Expect=3e-125]; ENSG00000172037, LAMB2, laminin subunit beta 2, [Score=423, Expect=2e-123]} {Mouse: ENSMUSG00000002900, Lamb1, laminin B1, [Score=422, Expect=4e-123]; ENSMUSG00000052911, Lamb2, laminin, beta 2, [Score=422, Expect=4e-123]} {Dmel: FBgn0261800, LanB1, [Score=392, Expect=5e-113]} {Celegans: WBGene00002247, lam-1, LAMinin related. See also lmb, [Score=414, Expect=1e-120]} {Smed: dd_Smed_v6_6093_0_1, dd_Smed_v6_6093_0_1, [Score=374, Expect=2e-107]} {RNA1509_4983} {RNA1310_676.1, RNA1509_4983} {RNA1509_4983, RNA815_206} |
| 5. | MligTC455_14762 | 717 | 14.94 | Mlig455_029494 | Neo: - Age: - |
1.676 | - | - | 0.716 | - | 0.960 | - | Mlig455_029494 {REF} {Length: 2696} {RNA1509_7935} {RNA1310_12227, RNA1509_7935} {RNA1509_7935, RNA815_4249} | |
| 6. | MligTC455_52848 | 1004 | 20.93 | Mlig455_018091 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 1.394/0.01138 Regeneration-upregulated BL: 1.617 Regeneration-enriched BL: 1.617 |
TRIP12 | 0.977 | - | - | - | - | 0.977 | - | Mlig455_018091 {REF} {Length: 8229} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=254.0]; WWE domain [PF02825.22, score=52.4]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=386, Expect=1e-107]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=379, Expect=7e-106]} {Dmel: FBgn0260794, ctrip, circadian trip, [Score=294, Expect=2e-79]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=232, Expect=9e-61]} {Smed: dd_Smed_v6_2525_0_2, dd_Smed_v6_2525_0_2, [Score=334, Expect=4e-92]} {RNA1509_25029, RNA1509_54642, RNA1509_8128} {RNA1310_1316.1, RNA1509_25029, RNA1509_54642} {RNA1509_25029, RNA1509_54642, RNA815_9388} |
| 7. | MligTC455_23593 | 92 | 1.91 | Mlig455_021623 | Neo: - Age: Up-Down-Down |
FMNL1 | 0.964 | 0.964 | - | - | - | - | - | Mlig455_021623 {REF} {Length: 5669} {TRANSSPLICED} {Pfam: Formin Homology 2 Domain [PF02181.25, score=260.2]; Diaphanous GTPase-binding Domain [PF06371.15, score=67.9]; Diaphanous FH3 Domain [PF06367.18, score=54.5]} {Human: ENSG00000184922, FMNL1, formin like 1, [RH, Score=295, Expect=4e-87]} {Mouse: ENSMUSG00000036053, Fmnl2, formin-like 2, [RH, Score=380, Expect=9e-115]} {Dmel: FBgn0267795, Frl, Formin-like, [RH, Score=448, Expect=1e-138]} {Celegans: WBGene00021698, frl-1, FRL (Formin Related gene in Leukocytes) homolog, [Score=184, Expect=2e-47]} {Smed: dd_Smed_v6_3917_0_1, dd_Smed_v6_3917_0_1, [Score=379, Expect=1e-113]} {RNA1509_11550} {RNA1310_16466, RNA1509_11550} {RNA1509_11550, RNA815_10742} |
| 8. | MligTC455_53309 | 828 | 17.26 | Mlig455_010936, Mlig455_033148 | Neo: - Age: Down-Down-Up |
0.962 | - | - | - | - | - | 0.962 | Mlig455_010936 {REF} {Length: 1821} {RNA1509_2779, RNA1509_28036} {RNA1310_23880, RNA1509_28036} {RNA1509_28036, RNA815_40707} Mlig455_033148 {REF} {Length: 1824} {RNA1509_2779} {RNA1310_23880} {RNA815_40707} |
|
| 9. | MligTC455_34620 | 420 | 8.76 | Mlig455_050122 | Neo: - Age: - |
0.956 | - | - | - | - | 0.956 | - | Mlig455_050122 {REF} {Length: 1963} {RNA1509_5703} {RNA1310_29202.1} {RNA815_17789} | |
| 10. | MligTC455_10358 | 57 | 1.19 | Mlig455_001082 | Neo: - Age: Down-Up-Down |
0.954 | 0.954 | - | - | - | - | - | Mlig455_001082 {REF} {Length: 1750} {TRANSSPLICED} {RNA1310_35838.1} {RNA815_17439} | |
| 11. | MligTC455_07027 | 264 | 5.5 | Mlig455_006113 | Neo: - Age: Up-Down-Up |
DYM | 0.953 | - | - | - | - | - | 0.953 | Mlig455_006113 {REF} {Length: 8514} {TRANSSPLICED} {Pfam: Dyggve-Melchior-Clausen syndrome protein [PF09742.11, score=319.4]} {Human: ENSG00000141627, DYM, dymeclin, [Score=239, Expect=8e-68]} {Mouse: ENSMUSG00000035765, Dym, dymeclin, [Score=252, Expect=1e-72]} {Dmel: FBgn0027607, CG8230, [Score=259, Expect=4e-75]} {Celegans: WBGene00008136, C47D12.2, [Score=156, Expect=2e-39]} {Smed: dd_Smed_v6_7629_0_2, dd_Smed_v6_7629_0_2, [Score=167, Expect=5e-44]} {RNA1509_18976, RNA1509_42729, RNA1509_47603, RNA1509_56463} {RNA1310_7034.1, RNA1509_18976, RNA1509_42729, RNA1509_47603, RNA1509_56463} {RNA1509_18976, RNA1509_42729, RNA1509_47603, RNA1509_56463, RNA815_3090} |
| 12. | MligTC455_10359 | 45 | 0.93 | Mlig455_001092 | Neo: - Age: - |
0.95 | 0.950 | - | - | - | - | - | Mlig455_001092 {REF} {Length: 1830} {TRANSSPLICED} {RNA1310_35838.1} {RNA815_17439} |
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