Data search
Results for MligTC455_52848
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_52848 | 1004 | 20.93 | Mlig455_018091 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 1.394/0.01138 Regeneration-upregulated BL: 1.617 Regeneration-enriched BL: 1.617 |
TRIP12 | Mlig455_018091 {REF} {Length: 8229} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=254.0]; WWE domain [PF02825.22, score=52.4]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=386, Expect=1e-107]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=379, Expect=7e-106]} {Dmel: FBgn0260794, ctrip, circadian trip, [Score=294, Expect=2e-79]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=232, Expect=9e-61]} {Smed: dd_Smed_v6_2525_0_2, dd_Smed_v6_2525_0_2, [Score=334, Expect=4e-92]} {RNA1509_25029, RNA1509_54642, RNA1509_8128} {RNA1310_1316.1, RNA1509_25029, RNA1509_54642} {RNA1509_25029, RNA1509_54642, RNA815_9388} |
Cumulative graph for MligTC455_52848
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.425 | 4.704 | 0.02376 | 0.41355 | |
| RegionR2 | 1.394 | 4.704 | 0.00041 | 0.01138 | |
| RegionR3 | 0.358 | 4.704 | 0.28094 | 0.82416 | |
| RegionR4 | 0.339 | 4.704 | 0.33241 | 0.65071 | |
| RegionR5 | 0.661 | 4.704 | 0.02069 | 0.09940 | |
| RegionR6 | 0.083 | 4.704 | 0.81281 | 1.00000 | |
| RegionR7 | 0.118 | 4.704 | 0.78917 | 1.00000 | |
| RegionR8 | -0.527 | 4.704 | 0.37842 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.494 | 4.704 | 0.79862 | 1.00000 | |
| RegenerationR2 | 0.274 | 4.704 | 0.32967 | 0.76720 | |
| RegenerationR3 | 0.792 | 4.704 | 0.01821 | 0.24670 | |
| RegenerationR4 | 0.016 | 4.704 | 0.95989 | 1.00000 | |
| RegenerationR5 | 0.245 | 4.704 | 0.40992 | 0.80547 | |
| RegenerationR6 | 1.04 | 4.704 | 0.00253 | 0.05714 | |
| RegenerationBL | 1.617 | 4.704 | 0.00002 | 0.00136 | Specific for BL: 1.617 |
| RegenerationTP | -0.131 | 4.704 | 0.80869 | 1.00000 |
Genes with expression patterns similar to MligTC455_52848
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_52848 | 1004 | 20.93 | Mlig455_018091 | Neo: Irradiation Age: Up-Down-Down Region-enriched R2: 1.394/0.01138 Regeneration-upregulated BL: 1.617 Regeneration-enriched BL: 1.617 |
TRIP12 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_018091 {REF} {Length: 8229} {TRANSSPLICED} {Pfam: HECT-domain (ubiquitin-transferase) [PF00632.27, score=254.0]; WWE domain [PF02825.22, score=52.4]} {Human: ENSG00000153827, TRIP12, thyroid hormone receptor interactor 12, [Score=386, Expect=1e-107]} {Mouse: ENSMUSG00000026219, Trip12, thyroid hormone receptor interactor 12, [Score=379, Expect=7e-106]} {Dmel: FBgn0260794, ctrip, circadian trip, [Score=294, Expect=2e-79]} {Celegans: WBGene00016405, hecd-1, HECtD1 ubiquitin ligase homolog, [Score=232, Expect=9e-61]} {Smed: dd_Smed_v6_2525_0_2, dd_Smed_v6_2525_0_2, [Score=334, Expect=4e-92]} {RNA1509_25029, RNA1509_54642, RNA1509_8128} {RNA1310_1316.1, RNA1509_25029, RNA1509_54642} {RNA1509_25029, RNA1509_54642, RNA815_9388} |
| 2. | MligTC455_22253 | 696 | 14.5 | Mlig455_039989 | Neo: - Age: - |
H2AFY | 2.509 | - | - | 0.951 | - | 0.785 | 0.773 | Mlig455_039989 {REF} {Length: 2087} {TRANSSPLICED} {Pfam: Macro domain [PF01661.23, score=74.1]; C-terminus of histone H2A [PF16211.7, score=47.3]; Core histone H2A/H2B/H3/H4 [PF00125.26, score=33.0]} {Human: ENSG00000113648, H2AFY, H2A histone family member Y, [RH, Score=280, Expect=4e-91]} {Mouse: ENSMUSG00000015937, H2afy, H2A histone family, member Y, [RH, Score=280, Expect=3e-91]} {Dmel: FBgn0053853, His2A:CG33853, [Score=125, Expect=5e-35]} {Celegans: WBGene00001909, his-35, Histone H2A, [Score=118, Expect=2e-32]} {Smed: dd_Smed_v6_4487_0_1, dd_Smed_v6_4487_0_1, [RH, Score=241, Expect=2e-76]} {RNA1509_21701} {RNA1310_14229, RNA1509_21701} {RNA1509_21701, RNA815_13070} |
| 3. | MligTC455_45709 | 239 | 4.99 | Mlig455_045713 | Neo: - Age: - |
1.756 | - | - | - | 0.960 | 0.796 | - | Mlig455_045713 {REF} {Length: 3988} {RNA1509_27594, RNA1509_44884} {RNA1310_20280, RNA1509_27594, RNA1509_44884} {RNA1509_27594, RNA1509_44884, RNA815_11252} | |
| 4. | MligTC455_36445 | 869 | 18.1 | Mlig455_008598 | Neo: Int S/G2/M Age: - |
CCAR1 | 1.659 | 0.709 | - | - | - | - | 0.950 | Mlig455_008598 {REF} {Length: 4422} {TRANSSPLICED} {Pfam: DBC1 [PF14443.8, score=118.3]; LAIKA domain [PF19256.1, score=84.4]; BURAN domain [PF19257.1, score=73.5]; S1-like [PF14444.8, score=54.7]; SAP domain [PF02037.29, score=41.5]} {Human: ENSG00000060339, CCAR1, cell division cycle and apoptosis regulator 1, [RH, Score=297, Expect=1e-87]} {Mouse: ENSMUSG00000020074, Ccar1, cell division cycle and apoptosis regulator 1, [RH, Score=301, Expect=1e-86]} {Celegans: WBGene00003085, ccar-1, CCAR1 homolog, [Score=225, Expect=1e-60]} {Smed: dd_Smed_v6_1608_0_1, dd_Smed_v6_1608_0_1, [Score=317, Expect=1e-94]} {RNA1509_27703, RNA1509_5646} {RNA1310_2640.1, RNA1509_27703, RNA1509_5646} {RNA1509_27703, RNA1509_5646, RNA815_7093} |
| 5. | MligTC455_29988 | 287 | 5.99 | Mlig455_040870 | Neo: - Age: Down-Down-Up |
MAP3K19 | 0.977 | - | - | - | - | 0.977 | - | Mlig455_040870 {REF} {Length: 2755} {Pfam: Protein kinase domain [PF00069.27, score=157.0]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.4]; Ankyrin repeats (3 copies) [PF12796.9, score=76.0]; Ankyrin repeats (many copies) [PF13637.8, score=49.7]; Ankyrin repeats (many copies) [PF13857.8, score=48.6]; Ankyrin repeat [PF13606.8, score=48.0]; Ankyrin repeat [PF00023.32, score=45.6]; Fungal protein kinase [PF17667.3, score=25.4]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=127, Expect=2e-30]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=5e-29]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=122, Expect=4e-28]; ENSMUSG00000031303, Map3k15, mitogen-activated protein kinase kinase kinase 15, [Score=118, Expect=7e-27]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=116, Expect=2e-26]} {Dmel: FBgn0024329, Mekk1, [Score=122, Expect=3e-28]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_3286_0_8, dd_Smed_v6_3286_0_8, [Score=105, Expect=3e-24]} {RNA1509_27731, RNA1509_42274} {RNA1310_10050, RNA1509_42274} {RNA1509_42274, RNA815_9449.1} |
| 6. | MligTC455_41239 | 408 | 8.51 | Mlig455_023863 | Neo: - |
CHRNA10 | 0.976 | - | - | - | 0.976 | - | - | Mlig455_023863 {REF} {Length: 2969} {TRANSSPLICED} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=140.1]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=49.1]} {Human: ENSG00000129749, CHRNA10, cholinergic receptor nicotinic alpha 10 subunit, [Score=157, Expect=3e-43]; ENSG00000174343, CHRNA9, cholinergic receptor nicotinic alpha 9 subunit, [Score=154, Expect=1e-41]} {Mouse: ENSMUSG00000066279, Chrna10, cholinergic receptor, nicotinic, alpha polypeptide 10, [Score=160, Expect=3e-44]; ENSMUSG00000029205, Chrna9, cholinergic receptor, nicotinic, alpha polypeptide 9, [Score=157, Expect=8e-43]; ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=152, Expect=7e-41]} {Dmel: FBgn0000039, nAChRalpha2, nicotinic Acetylcholine Receptor alpha2, [Score=158, Expect=7e-43]} {Celegans: WBGene00006774, unc-38, Acetylcholine receptor subunit alpha-type unc-38, [Score=158, Expect=2e-43]} {Smed: dd_Smed_v6_2019_0_1, dd_Smed_v6_2019_0_1, [Score=286, Expect=1e-92]} {RNA1509_9446} {RNA1310_20858} {RNA815_4846} |
| 7. | MligTC455_33645 | 360 | 7.5 | Mlig455_039156 | Neo: - Age: - |
RBBP6 | 0.969 | - | - | - | - | - | 0.969 | Mlig455_039156 {REF} {Length: 5326} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=60.2]; Zinc knuckle [PF13696.8, score=31.1]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=22.7]; Zinc finger, C3HC4 type (RING finger) [PF13920.8, score=21.8]; zinc finger of C3HC4-type, RING [PF15227.8, score=19.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [RH, Score=208, Expect=1e-53]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [RH, Score=203, Expect=3e-52]} {Dmel: FBgn0086129, snama, something that sticks like glue, [RH, Score=139, Expect=6e-33]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [RH, Score=141, Expect=1e-33]} {Smed: dd_Smed_v6_3780_0_2, dd_Smed_v6_3780_0_2, [RH, Score=219, Expect=1e-58]} {RNA1509_12243} {RNA1310_5249, RNA1509_12243} {RNA1509_12243, RNA815_11810} |
| 8. | MligTC455_53462 | 302 | 6.28 | Mlig455_040400 | Neo: Irradiation Age: - Region-enriched R5: 2.488/0.00116 |
DPF3 | 0.957 | - | - | - | - | - | 0.957 | Mlig455_040400 {REF} {Length: 2402} {TRANSSPLICED} {Pfam: PHD-finger [PF00628.31, score=61.8]; N-terminal domain of DPF2/REQ. [PF14051.8, score=55.8]} {Human: ENSG00000205683, DPF3, double PHD fingers 3, [RH, Score=154, Expect=1e-41]; ENSG00000133884, DPF2, double PHD fingers 2, [RH, Score=153, Expect=4e-41]; ENSG00000011332, DPF1, double PHD fingers 1, [RH, Score=152, Expect=2e-41]} {Mouse: ENSMUSG00000024826, Dpf2, D4, zinc and double PHD fingers family 2, [RH, Score=154, Expect=1e-41]; ENSMUSG00000021221, Dpf3, D4, zinc and double PHD fingers, family 3, [RH, Score=154, Expect=8e-42]; ENSMUSG00000030584, Dpf1, D4, zinc and double PHD fingers family 1, [RH, Score=152, Expect=4e-41]} {Dmel: FBgn0033015, d4, [RH, Score=157, Expect=4e-42]} {Celegans: WBGene00016200, dpff-1, Zinc finger protein dpff-1, [RH, Score=127, Expect=2e-32]} {Smed: dd_Smed_v6_5825_0_1, dd_Smed_v6_5825_0_1, [RH, Score=159, Expect=1e-43]} {RNA1509_33008} {RNA1310_18817.1} {RNA815_28422} |
| 9. | MligTC455_32340 | 117 | 2.43 | Mlig455_056560 | Neo: Irradiation Age: Up-Down-Up |
SLC37A2 | 0.956 | - | - | - | - | - | 0.956 | Mlig455_056560 {REF} {Length: 5926} {Pfam: Major Facilitator Superfamily [PF07690.18, score=130.1]; Calponin homology (CH) domain [PF00307.33, score=87.8]; CAMSAP CH domain [PF11971.10, score=23.8]} {Human: ENSG00000134955, SLC37A2, solute carrier family 37 member 2, [Score=488, Expect=6e-160]} {Mouse: ENSMUSG00000032122, Slc37a2, solute carrier family 37 (glycerol-3-phosphate transporter), member 2, [Score=493, Expect=8e-162]; ENSMUSG00000024036, Slc37a1, solute carrier family 37 (glycerol-3-phosphate transporter), member 1, [Score=473, Expect=1e-153]} {Dmel: FBgn0034611, MFS16, Major Facilitator Superfamily Transporter 16, [Score=441, Expect=8e-142]} {Celegans: WBGene00011718, T11G6.3, [Score=181, Expect=6e-49]} {Smed: dd_Smed_v6_8095_0_1, dd_Smed_v6_8095_0_1, [RH, Score=483, Expect=7e-158]} {RNA1509_3582} {RNA1310_10163} {RNA815_3366.1} |
| 10. | MligTC455_15550 | 944 | 19.67 | Mlig455_022094, Mlig455_053631 | Neo: Irradiation Age: - |
SBF1, SBF2 | 0.953 | - | - | - | 0.953 | - | - | Mlig455_022094 {REF} {Length: 9161} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=250.6]; PH domain [PF00169.31, score=28.6]} {Human: ENSG00000100241, SBF1, SET binding factor 1, [Score=196, Expect=1e-49]} {Mouse: ENSMUSG00000036529, Sbf1, SET binding factor 1, [Score=194, Expect=3e-49]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [Score=186, Expect=4e-47]} {Celegans: WBGene00003475, mtm-1, Myotubularin-related protein 1, [Score=141, Expect=2e-34]} {Smed: dd_Smed_v6_7244_0_1, dd_Smed_v6_7244_0_1, [Score=201, Expect=8e-52]} {RNA1509_52361} {RNA1310_177.2} {RNA815_73.1} Mlig455_053631 {REF} {Length: 9263} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=248.1]; DENN (AEX-3) domain [PF02141.23, score=108.6]; Myotubularin protein [PF12335.10, score=89.2]; uDENN domain [PF03456.20, score=30.7]; PH domain [PF00169.31, score=27.6]} {Human: ENSG00000133812, SBF2, SET binding factor 2, [Score=448, Expect=2e-127]; ENSG00000100241, SBF1, SET binding factor 1, [Score=436, Expect=9e-124]} {Mouse: ENSMUSG00000038371, Sbf2, SET binding factor 2, [Score=452, Expect=3e-129]; ENSMUSG00000036529, Sbf1, SET binding factor 1, [Score=431, Expect=3e-122]} {Dmel: FBgn0025802, Sbf, SET domain binding factor, [Score=308, Expect=9e-84]} {Celegans: WBGene00003475, mtm-1, Myotubularin-related protein 1, [Score=142, Expect=1e-34]} {Smed: dd_Smed_v6_7244_0_1, dd_Smed_v6_7244_0_1, [Score=405, Expect=1e-113]} {RNA1509_52361} {RNA1310_177.1} {RNA815_73.1} |
| 11. | MligTC455_50020 | 590 | 12.29 | Mlig455_050575 | Neo: - Age: Down-Down-Down, logFC(26M/2M)=-4.649 Region-enriched R4: 1.440/0.03021 |
NSD2 | 0.951 | - | - | - | - | - | 0.951 | Mlig455_050575 {REF} {Length: 4368} {TRANSSPLICED} {Pfam: AWS domain [PF17907.3, score=47.8]; SET domain [PF00856.30, score=36.1]; PHD-finger [PF00628.31, score=36.0]; NSD Cys-His rich domain [PF17982.3, score=33.7]; PWWP domain [PF00855.19, score=29.5]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=427, Expect=1e-130]; ENSG00000147548, NSD3, nuclear receptor binding SET domain protein 3, [Score=412, Expect=2e-124]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=430, Expect=1e-131]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=411, Expect=3e-122]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=246, Expect=2e-67]} {Celegans: WBGene00016603, met-1, Histone-lysine N-methyltransferase, [Score=79.0, Expect=1e-14]} {Smed: dd_Smed_v6_4755_0_2, dd_Smed_v6_4755_0_2, [Score=290, Expect=8e-86]} {RNA1509_8385} {RNA1310_4002} {RNA815_849} |
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