TomoSeq data search

Data search

Results for MligTC455_29994

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_29994	724	15.08	Mlig455_023243, Mlig455_023309	Neo: - Age: Up-Down-Up	ANGPTL7, FGA	Mlig455_023243 {REF} {Length: 4659} {TRANSSPLICED} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=70.5, Expect=4e-14]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=66.2, Expect=7e-13]} {Dmel: FBgn0087011, CG41520, [Score=50.4, Expect=2e-07]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1} Mlig455_023309 {REF} {Length: 3837} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.5]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=97.8, Expect=1e-20]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=96.3, Expect=5e-21]; ENSG00000120332, TNN, tenascin N, [Score=94.4, Expect=2e-19]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=94.0, Expect=1e-19]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=97.8, Expect=8e-22]; ENSMUSG00000028364, Tnc, tenascin C, [Score=94.4, Expect=2e-19]; ENSMUSG00000026725, Tnn, tenascin N, [Score=94.0, Expect=3e-19]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003326, sca, scabrous, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00020516, T15B7.1, [RH, Score=73.6, Expect=9e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=101, Expect=3e-22]} {RNA1509_13273, RNA1509_53172} {RNA1310_11377.1, RNA1509_53172} {RNA1509_53172, RNA815_4387.2}

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_29994

724

15.08

Mlig455_023243, Mlig455_023309

Neo: -

Age: Up-Down-Up

ANGPTL7, FGA

Mlig455_023243 {REF} {Length: 4659} {TRANSSPLICED} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=70.5, Expect=4e-14]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=66.2, Expect=7e-13]} {Dmel: FBgn0087011, CG41520, [Score=50.4, Expect=2e-07]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1}

Mlig455_023309 {REF} {Length: 3837} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.5]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=97.8, Expect=1e-20]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=96.3, Expect=5e-21]; ENSG00000120332, TNN, tenascin N, [Score=94.4, Expect=2e-19]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=94.0, Expect=1e-19]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=97.8, Expect=8e-22]; ENSMUSG00000028364, Tnc, tenascin C, [Score=94.4, Expect=2e-19]; ENSMUSG00000026725, Tnn, tenascin N, [Score=94.0, Expect=3e-19]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003326, sca, scabrous, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00020516, T15B7.1, [RH, Score=73.6, Expect=9e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=101, Expect=3e-22]} {RNA1509_13273, RNA1509_53172} {RNA1310_11377.1, RNA1509_53172} {RNA1509_53172, RNA815_4387.2}

Cumulative graph for MligTC455_29994

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-0.575	4.262	0.66291	1.00000
RegionR2	0.209	4.262	0.74855	1.00000
RegionR3	0.268	4.262	0.61619	1.00000
RegionR4	-1.117	4.262	0.07918	0.26307
RegionR5	-0.932	4.262	0.08237	0.26750
RegionR6	1.481	4.262	0.00207	0.06206
RegionR7	0.666	4.262	0.28574	0.91949
RegionR8	0	4.262	0.99902	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1	4.262	0.61597	1.00000
RegenerationR2	0.636	4.262	0.27662	0.72087
RegenerationR3	0.416	4.262	0.49419	0.85559
RegenerationR4	1.126	4.262	0.07906	0.44578
RegenerationR5	0.994	4.262	0.10716	0.49502
RegenerationR6	-0.839	4.262	0.17546	0.50831
RegenerationBL	-1.571	4.262	0.03836	0.22207
RegenerationTP	0.872	4.262	0.21724	0.66050

Genes with expression patterns similar to MligTC455_29994

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_29994	724	15.08	Mlig455_023243, Mlig455_023309	Neo: - Age: Up-Down-Up	ANGPTL7, FGA	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_023243 {REF} {Length: 4659} {TRANSSPLICED} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=70.5, Expect=4e-14]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=66.2, Expect=7e-13]} {Dmel: FBgn0087011, CG41520, [Score=50.4, Expect=2e-07]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1} Mlig455_023309 {REF} {Length: 3837} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.5]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=97.8, Expect=1e-20]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=96.3, Expect=5e-21]; ENSG00000120332, TNN, tenascin N, [Score=94.4, Expect=2e-19]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=94.0, Expect=1e-19]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=97.8, Expect=8e-22]; ENSMUSG00000028364, Tnc, tenascin C, [Score=94.4, Expect=2e-19]; ENSMUSG00000026725, Tnn, tenascin N, [Score=94.0, Expect=3e-19]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003326, sca, scabrous, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00020516, T15B7.1, [RH, Score=73.6, Expect=9e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=101, Expect=3e-22]} {RNA1509_13273, RNA1509_53172} {RNA1310_11377.1, RNA1509_53172} {RNA1509_53172, RNA815_4387.2}
2.	MligTC455_53788	175	3.65	Mlig455_046938	Neo: - Age: Up-Down-Down	PATJ	1.833	0.857	-	-	-	-	0.976	Mlig455_046938 {REF} {Length: 2899} {Pfam: PDZ domain [PF00595.26, score=86.8]; PDZ domain [PF17820.3, score=53.6]; PDZ domain [PF13180.8, score=51.0]; Family of unknown function (DUF6288) [PF19805.1, score=24.2]} {Human: ENSG00000132849, PATJ, PATJ, crumbs cell polarity complex component, [Score=80.5, Expect=1e-16]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=74.7, Expect=7e-15]} {Dmel: FBgn0087007, bbg, big bang, [Score=58.2, Expect=2e-09]} {Celegans: WBGene00003404, mpz-1, Multiple PDZ domain protein, [Score=56.6, Expect=5e-09]} {Smed: dd_Smed_v6_854_0_3, dd_Smed_v6_854_0_3, [Score=65.1, Expect=7e-12]} {RNA1509_37898} {RNA1310_15726, RNA1509_37898} {RNA1509_37898, RNA815_2967}
3.	MligTC455_12806	74	1.55	Mlig455_054118	Neo: - Age: - Region-enriched R2: 6.723/0.03854	CASP2	1.757	0.800	-	-	-	0.957	-	Mlig455_054118 {REF} {Length: 2078} {Pfam: Caspase domain [PF00656.24, score=121.7]} {Human: ENSG00000106144, CASP2, caspase 2, [RH, Score=157, Expect=6e-44]} {Mouse: ENSMUSG00000029863, Casp2, caspase 2, [RH, Score=160, Expect=6e-45]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=100, Expect=9e-24]} {Celegans: WBGene00000417, ced-3, Cell death protein 3 Cell death protein 3 subunit 1 Cell death protein 3 subunit 2, [RH, Score=159, Expect=1e-46]} {Smed: dd_Smed_v6_1167_0_1, dd_Smed_v6_1167_0_1, [Score=122, Expect=7e-33]} {RNA1509_3963} {RNA1310_16575.2} {RNA815_6350.1}
4.	MligTC455_21122	247	5.14	Mlig455_025099	Neo: - Age: -	SCAI	1.71	-	-	-	0.955	0.755	-	Mlig455_025099 {REF} {Length: 4572} {Pfam: Protein SCAI [PF12070.10, score=720.7]} {Human: ENSG00000173611, SCAI, suppressor of cancer cell invasion, [Score=359, Expect=8e-117]} {Mouse: ENSMUSG00000035236, Scai, suppressor of cancer cell invasion, [Score=357, Expect=4e-116]} {Dmel: FBgn0035677, CG13293, [RH, Score=647, Expect=0.0]} {Smed: dd_Smed_v6_13420_0_1, dd_Smed_v6_13420_0_1, [RH, Score=637, Expect=0.0]} {RNA1509_47392} {RNA1310_6699.1, RNA1509_47392} {RNA1509_47392, RNA815_18726}
5.	MligTC455_23049	94	1.96	Mlig455_013808	Neo: - Age: -		0.962	-	-	-	-	-	0.962	Mlig455_013808 {REF} {Length: 2769} {RNA1509_16377} {RNA1310_64314} {RNA815_34468.1}
6.	MligTC455_17105	886	18.45	Mlig455_000588, Mlig455_030384	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.310	REEP2	0.951	-	-	-	-	-	0.951	Mlig455_000588 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926} {RNA1310_20837} {RNA815_8468.1} Mlig455_030384 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926, RNA1509_38680} {RNA1310_20837, RNA1509_16926, RNA1509_38680} {RNA1509_16926, RNA1509_38680, RNA815_8468.1}