TomoSeq data search

Data search

Results for MligTC455_17105

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_17105

886

18.45

Mlig455_000588, Mlig455_030384

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.310

REEP2

Mlig455_000588 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926} {RNA1310_20837} {RNA815_8468.1}

Mlig455_030384 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926, RNA1509_38680} {RNA1310_20837, RNA1509_16926, RNA1509_38680} {RNA1509_16926, RNA1509_38680, RNA815_8468.1}

Cumulative graph for MligTC455_17105

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-7.237	4.479	0.02216	0.40508
RegionR2	0.588	4.479	0.49894	0.87868
RegionR3	1.363	4.479	0.02663	0.27825
RegionR4	1.506	4.479	0.04458	0.17838
RegionR5	0.542	4.479	0.51684	0.87961
RegionR6	1.26	4.479	0.04968	0.41761
RegionR7	1.327	4.479	0.06191	0.47792
RegionR8	0.652	4.479	0.48730	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	7.186	4.479	0.04958	0.69713
RegenerationR2	0.1	4.479	0.79943	0.98985
RegenerationR3	-0.605	4.479	0.15054	0.57964
RegenerationR4	-0.856	4.479	0.07853	0.44487
RegenerationR5	-0.398	4.479	0.36666	0.77734
RegenerationR6	-0.771	4.479	0.07990	0.35290
RegenerationBL	-0.513	4.479	0.28785	0.64947
RegenerationTP	0.252	4.479	0.61134	0.96755

Genes with expression patterns similar to MligTC455_17105

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_17105	886	18.45	Mlig455_000588, Mlig455_030384	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.310	REEP2	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_000588 {REF} {Length: 1554} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926} {RNA1310_20837} {RNA815_8468.1} Mlig455_030384 {REF} {Length: 1551} {TRANSSPLICED} {Pfam: TB2/DP1, HVA22 family [PF03134.21, score=93.3]} {Human: ENSG00000132563, REEP2, receptor accessory protein 2, [RH, Score=157, Expect=7e-47]} {Mouse: ENSMUSG00000038555, Reep2, receptor accessory protein 2, [RH, Score=154, Expect=3e-46]} {Dmel: FBgn0261564, Reep1, Receptor expression enhancing protein 1, [RH, Score=161, Expect=4e-46]} {Celegans: WBGene00020562, T19C3.4, [Score=132, Expect=4e-38]} {Smed: dd_Smed_v6_5799_0_2, dd_Smed_v6_5799_0_2, [RH, Score=184, Expect=6e-58]} {RNA1509_16926, RNA1509_38680} {RNA1310_20837, RNA1509_16926, RNA1509_38680} {RNA1509_16926, RNA1509_38680, RNA815_8468.1}
2.	MligTC455_45442	3456	72	Mlig455_068984	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.327	NFE2L1	1.814	0.857	-	-	0.957	-	-	Mlig455_068984 {REF} {Length: 4179} {TRANSSPLICED} {Pfam: bZIP Maf transcription factor [PF03131.19, score=35.9]} {Human: ENSG00000082641, NFE2L1, nuclear factor, erythroid 2 like 1, [RH, Score=90.1, Expect=3e-18]} {Mouse: ENSMUSG00000038615, Nfe2l1, nuclear factor, erythroid derived 2,-like 1, [RH, Score=89.4, Expect=3e-18]} {Dmel: FBgn0262975, cnc, cap-n-collar, [RH, Score=84.7, Expect=1e-16]} {RNA1509_34527, RNA1509_34657, RNA1509_40413, RNA1509_4470, RNA1509_44761, RNA1509_45825, RNA1509_6773} {RNA1310_13206, RNA1509_34527, RNA1509_34657, RNA1509_40413, RNA1509_44761, RNA1509_45825, RNA1509_6773} {RNA1509_34527, RNA1509_34657, RNA1509_40413, RNA1509_44761, RNA1509_45825, RNA1509_6773, RNA815_4901}
3.	MligTC455_26674	269	5.61	Mlig455_032971	Neo: - Age: -		1.778	0.826	-	-	-	-	0.952	Mlig455_032971 {REF} {Length: 1976} {TRANSSPLICED} {RNA1509_55515} {RNA1310_23195.1} {RNA815_9573}
4.	MligTC455_34837	346	7.21	Mlig455_022509	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.578	MAN1A2	1.712	-	-	0.754	-	0.958	-	Mlig455_022509 {REF} {Length: 2313} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=369.0]} {Human: ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=248, Expect=2e-74]; ENSG00000117643, MAN1C1, mannosidase alpha class 1C member 1, [Score=236, Expect=7e-72]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=249, Expect=4e-75]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=243, Expect=9e-73]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=234, Expect=5e-70]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=260, Expect=4e-80]} {RNA1509_40257} {RNA1310_10155.1} {RNA815_4503.1}
5.	MligTC455_31096	655	13.64	Mlig455_013922	Neo: - Age: Down-Up-Up Regeneration-upregulated R2: 2.048 Regeneration-enriched R2: 2.048		1.699	-	-	-	0.743	0.956	-	Mlig455_013922 {REF} {Length: 867} {RNA1509_8449} {RNA1310_47043} {RNA815_808.1}
6.	MligTC455_19211	107	2.23	Mlig455_052588	Neo: - Age: - Region-enriched R8: 3.795/0.01587		1.681	0.729	-	-	-	-	0.952	Mlig455_052588 {REF} {Length: 2340} {Celegans: WBGene00019180, H10D18.5, [RH, Score=62.4, Expect=6e-11]} {Smed: dd_Smed_v6_10251_0_1, dd_Smed_v6_10251_0_1, [RH, Score=95.9, Expect=2e-23]} {RNA1509_8096} {RNA1310_25906} {RNA815_14581.1}
7.	MligTC455_35384	1354	28.21	Mlig455_017265	Neo: Irradiation Age: -	MPPED1	0.974	-	-	-	0.974	-	-	Mlig455_017265 {REF} {Length: 2106} {Human: ENSG00000186732, MPPED1, metallophosphoesterase domain containing 1, [Score=72.8, Expect=7e-14]; ENSG00000066382, MPPED2, metallophosphoesterase domain containing 2, [Score=72.4, Expect=5e-14]} {Mouse: ENSMUSG00000016386, Mpped2, metallophosphoesterase domain containing 2, [Score=72.8, Expect=3e-14]; ENSMUSG00000041708, Mpped1, metallophosphoesterase domain containing 1, [Score=72.8, Expect=4e-14]} {Celegans: WBGene00019479, K07C11.7, UPF0046 protein K07C11.7, [Score=70.9, Expect=7e-14]} {Smed: dd_Smed_v6_9610_0_1, dd_Smed_v6_9610_0_1, [RH, Score=129, Expect=3e-35]} {RNA1509_31891, RNA1509_35651, RNA1509_55357, RNA1509_8395} {RNA1310_9507, RNA1509_31891, RNA1509_35651, RNA1509_55357, RNA1509_8395} {RNA1509_31891, RNA1509_35651, RNA1509_55357, RNA1509_8395, RNA815_4279.2}
8.	MligTC455_18720	595	12.4	Mlig455_041810	Neo: - Age: logFC(26M/2M)=-0.320	ANKUB1	0.958	-	-	-	0.958	-	-	Mlig455_041810 {REF} {Length: 2454} {Pfam: Ubiquitin family [PF00240.25, score=36.0]} {Human: ENSG00000206199, ANKUB1, ankyrin repeat and ubiquitin domain containing 1, [RH, Score=258, Expect=8e-78]} {Mouse: ENSMUSG00000074591, Ankub1, ankrin repeat and ubiquitin domain containing 1, [RH, Score=258, Expect=5e-78]} {Smed: dd_Smed_v6_9027_0_1, dd_Smed_v6_9027_0_1, [RH, Score=508, Expect=2e-173]} {RNA1509_23349, RNA1509_30870, RNA1509_7686} {RNA1310_10366.1, RNA1509_23349, RNA1509_30870, RNA1509_7686} {RNA1509_23349, RNA1509_30870, RNA1509_7686, RNA815_3711.1}
9.	MligTC455_15427	112	2.32	Mlig455_036243	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_036243 {REF} {Length: 1518} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=21.4]} {RNA1509_54681} {RNA1310_18763} {RNA815_17502}
10.	MligTC455_29994	724	15.08	Mlig455_023243, Mlig455_023309	Neo: - Age: Up-Down-Up	ANGPTL7, FGA	0.951	-	-	-	-	-	0.951	Mlig455_023243 {REF} {Length: 4659} {TRANSSPLICED} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=74.4]} {Human: ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=70.5, Expect=4e-14]} {Mouse: ENSMUSG00000028989, Angptl7, angiopoietin-like 7, [Score=66.2, Expect=7e-13]} {Dmel: FBgn0087011, CG41520, [Score=50.4, Expect=2e-07]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1} Mlig455_023309 {REF} {Length: 3837} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.5]} {Human: ENSG00000171560, FGA, fibrinogen alpha chain, [Score=97.8, Expect=1e-20]; ENSG00000171819, ANGPTL7, angiopoietin like 7, [Score=96.3, Expect=5e-21]; ENSG00000120332, TNN, tenascin N, [Score=94.4, Expect=2e-19]; ENSG00000101280, ANGPT4, angiopoietin 4, [Score=94.0, Expect=1e-19]} {Mouse: ENSMUSG00000026938, Fcna, ficolin A, [Score=97.8, Expect=8e-22]; ENSMUSG00000028364, Tnc, tenascin C, [Score=94.4, Expect=2e-19]; ENSMUSG00000026725, Tnn, tenascin N, [Score=94.0, Expect=3e-19]; ENSMUSG00000028001, Fga, fibrinogen alpha chain, [Score=93.6, Expect=2e-19]} {Dmel: FBgn0003326, sca, scabrous, [Score=99.8, Expect=2e-21]} {Celegans: WBGene00020516, T15B7.1, [RH, Score=73.6, Expect=9e-14]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=101, Expect=3e-22]} {RNA1509_13273, RNA1509_53172} {RNA1310_11377.1, RNA1509_53172} {RNA1509_53172, RNA815_4387.2}

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