TomoSeq data search

Data search

Results for MligTC455_30196

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30196

90

1.87

Mlig455_037120

Neo: -

Age: -

CBWD2

Mlig455_037120 {REF} {Length: 5192} {TRANSSPLICED} {Pfam: CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=158.4]; DALR anticodon binding domain [PF05746.17, score=33.9]; Cobalamin synthesis protein cobW C-terminal domain [PF07683.16, score=30.8]} {Human: ENSG00000136682, CBWD2, COBW domain containing 2, [RH, Score=238, Expect=2e-70]; ENSG00000172785, CBWD1, COBW domain containing 1, [RH, Score=238, Expect=4e-70]; ENSG00000196873, CBWD3, COBW domain containing 3, [RH, Score=233, Expect=3e-68]; ENSG00000147996, CBWD5, COBW domain containing 5, [RH, Score=231, Expect=8e-68]; ENSG00000215126, CBWD6, COBW domain containing 6, [RH, Score=228, Expect=2e-66]} {Mouse: ENSMUSG00000024878, Cbwd1, COBW domain containing 1, [RH, Score=246, Expect=2e-73]} {Smed: dd_Smed_v6_9040_0_1, dd_Smed_v6_9040_0_1, [RH, Score=207, Expect=2e-61]} {RNA1509_36947} {RNA1310_5600.1, RNA1509_36947} {RNA1509_36947, RNA815_2267.1}

Cumulative graph for MligTC455_30196

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-8.195	1.85	0.02995	0.44500
RegionR2	3.571	1.85	0.00754	0.08428
RegionR3	0.99	1.85	0.36999	0.90470
RegionR4	-2.675	1.85	1.00000	1.00000
RegionR5	-0.534	1.85	0.97500	1.00000
RegionR6	0.12	1.85	0.82308	1.00000
RegionR7	2.486	1.85	0.05055	0.43228
RegionR8	4.237	1.85	0.00149	0.06096

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	5.746	1.85	0.99971	1.00000
RegenerationR2	0.334	1.85	0.70567	0.95820
RegenerationR3	0.947	1.85	0.36628	0.78112
RegenerationR4	0.036	1.85	0.86880	1.00000
RegenerationR5	0.731	1.85	0.38320	0.78830
RegenerationR6	2.169	1.85	0.08691	0.36862
RegenerationBL	-3.916	1.85	0.18138	0.51066
RegenerationTP	-1.913	1.85	0.36526	0.80405

Genes with expression patterns similar to MligTC455_30196

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30196	90	1.87	Mlig455_037120	Neo: - Age: -	CBWD2	4	1.000	1.000	-	-	1.000	1.000	Mlig455_037120 {REF} {Length: 5192} {TRANSSPLICED} {Pfam: CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=158.4]; DALR anticodon binding domain [PF05746.17, score=33.9]; Cobalamin synthesis protein cobW C-terminal domain [PF07683.16, score=30.8]} {Human: ENSG00000136682, CBWD2, COBW domain containing 2, [RH, Score=238, Expect=2e-70]; ENSG00000172785, CBWD1, COBW domain containing 1, [RH, Score=238, Expect=4e-70]; ENSG00000196873, CBWD3, COBW domain containing 3, [RH, Score=233, Expect=3e-68]; ENSG00000147996, CBWD5, COBW domain containing 5, [RH, Score=231, Expect=8e-68]; ENSG00000215126, CBWD6, COBW domain containing 6, [RH, Score=228, Expect=2e-66]} {Mouse: ENSMUSG00000024878, Cbwd1, COBW domain containing 1, [RH, Score=246, Expect=2e-73]} {Smed: dd_Smed_v6_9040_0_1, dd_Smed_v6_9040_0_1, [RH, Score=207, Expect=2e-61]} {RNA1509_36947} {RNA1310_5600.1, RNA1509_36947} {RNA1509_36947, RNA815_2267.1}
2.	MligTC455_30198	84	1.75	Mlig455_052222	Neo: - Age: Down-Up-Down	CBWD2	3.894	0.992	0.968	-	-	0.935	0.999	Mlig455_052222 {REF} {Length: 2997} {TRANSSPLICED} {Pfam: CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=158.2]; Cobalamin synthesis protein cobW C-terminal domain [PF07683.16, score=29.8]; DALR anticodon binding domain [PF05746.17, score=29.5]} {Human: ENSG00000136682, CBWD2, COBW domain containing 2, [RH, Score=241, Expect=2e-71]; ENSG00000172785, CBWD1, COBW domain containing 1, [RH, Score=241, Expect=3e-71]; ENSG00000196873, CBWD3, COBW domain containing 3, [RH, Score=236, Expect=1e-69]; ENSG00000147996, CBWD5, COBW domain containing 5, [RH, Score=235, Expect=5e-69]; ENSG00000215126, CBWD6, COBW domain containing 6, [RH, Score=231, Expect=1e-67]} {Mouse: ENSMUSG00000024878, Cbwd1, COBW domain containing 1, [RH, Score=249, Expect=1e-74]} {Smed: dd_Smed_v6_9040_0_1, dd_Smed_v6_9040_0_1, [RH, Score=207, Expect=2e-61]} {RNA1509_36947} {RNA1310_5600.1} {RNA815_2267.1}
3.	MligTC455_20610	38	0.8	Mlig455_028284	Neo: - Age: Up-Down-Up Region-enriched R5: 3.023/0.01796	HIST2H3C	0.976	-	-	-	-	-	0.976	Mlig455_028284 {REF} {Length: 2107} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=179.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=25.5]; CENP-S protein [PF15630.8, score=21.5]; PCNA-associated factor histone like domain [PF15715.7, score=21.0]} {Human: ENSG00000203811, HIST2H3C, histone cluster 2 H3 family member c, [RH, Score=271, Expect=4e-95]; ENSG00000183598, HIST2H3D, histone cluster 2 H3 family member d, [RH, Score=271, Expect=4e-95]; ENSG00000203852, HIST2H3A, histone cluster 2 H3 family member a, [RH, Score=271, Expect=4e-95]; ENSG00000275714, HIST1H3A, histone cluster 1 H3 family member a, [RH, Score=268, Expect=4e-94]; ENSG00000273983, HIST1H3G, histone cluster 1 H3 family member g, [RH, Score=268, Expect=4e-94]; ENSG00000278828, HIST1H3H, histone cluster 1 H3 family member h, [RH, Score=268, Expect=4e-94]; ENSG00000274267, HIST1H3B, histone cluster 1 H3 family member b, [RH, Score=268, Expect=4e-94]; ENSG00000197153, HIST1H3J, histone cluster 1 H3 family member j, [RH, Score=268, Expect=4e-94]; ENSG00000274750, HIST1H3E, histone cluster 1 H3 family member e, [RH, Score=268, Expect=4e-94]; ENSG00000275379, HIST1H3I, histone cluster 1 H3 family member i, [RH, Score=268, Expect=4e-94]; ENSG00000277775, HIST1H3F, histone cluster 1 H3 family member f, [RH, Score=268, Expect=4e-94]; ENSG00000278272, HIST1H3C, histone cluster 1 H3 family member c, [RH, Score=268, Expect=4e-94]; ENSG00000197409, HIST1H3D, histone cluster 1 H3 family member d, [RH, Score=268, Expect=4e-94]; ENSG00000163041, H3F3A, H3 histone family member 3A, [RH, Score=267, Expect=2e-93]; ENSG00000132475, H3F3B, H3 histone family member 3B, [RH, Score=267, Expect=2e-93]; ENSG00000168148, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000285435, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000203818, HIST2H3PS2, histone cluster 2 H3 pseudogene 2, [RH, Score=263, Expect=6e-92]} {Mouse: ENSMUSG00000081058, Hist2h3c2, histone cluster 2, H3c2, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069273, Hist1h3e, histone cluster 1, H3e, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069267, Hist1h3b, histone cluster 1, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000074403, Hist2h3b, histone cluster 2, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069310, Hist1h3c, histone cluster 1, H3c, [RH, Score=271, Expect=3e-95]; ENSMUSG00000100210, Hist1h3f, histone cluster 1, H3f, [RH, Score=271, Expect=3e-95]; ENSMUSG00000093769, Hist2h3c1, histone cluster 2, H3c1, [RH, Score=271, Expect=3e-95]; ENSMUSG00000099583, Hist1h3d, histone cluster 1, H3d, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069265, Hist1h3a, histone cluster 1, H3a, [RH, Score=268, Expect=2e-94]; ENSMUSG00000099517, Hist1h3g, histone cluster 1, H3g, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101972, Hist1h3i, histone cluster 1, H3i, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101355, Hist1h3h, histone cluster 1, H3h, [RH, Score=268, Expect=2e-94]; ENSMUSG00000016559, H3f3b, H3 histone, family 3B, [RH, Score=267, Expect=1e-93]; ENSMUSG00000060743, H3f3a, H3 histone, family 3A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0051613, His3:CG31613, [RH, Score=271, Expect=2e-95]} {Celegans: WBGene00001945, his-71, Histone H3.3 type 1, [RH, Score=266, Expect=9e-94]} {Smed: dd_Smed_v6_13347_0_1, dd_Smed_v6_13347_0_1, [RH, Score=271, Expect=1e-95]} {RNA1509_6806} {RNA1310_31846.2} {RNA815_19717.1}
4.	MligTC455_37861	26	0.55	Mlig455_015320	Neo: - Age: Up-Down-Up	NBAS	0.969	-	-	-	-	-	0.969	Mlig455_015320 {REF} {Length: 8596} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=49.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=380, Expect=1e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=410, Expect=8e-115]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=202, Expect=1e-51]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}
5.	MligTC455_16538	42	0.87	Mlig455_061455	Neo: Int S/G2/M Age: Down-Up-Down	QTRT1	0.964	-	-	-	-	-	0.964	Mlig455_061455 {REF} {Length: 1715} {TRANSSPLICED} {Pfam: Queuine tRNA-ribosyltransferase [PF01702.20, score=455.3]} {Human: ENSG00000213339, QTRT1, queuine tRNA-ribosyltransferase catalytic subunit 1, [RH, Score=488, Expect=2e-172]} {Mouse: ENSMUSG00000002825, Qtrt1, queuine tRNA-ribosyltransferase catalytic subunit 1, [RH, Score=470, Expect=2e-165]} {Dmel: FBgn0031321, Tgt, tRNA-guanine transglycosylase, [RH, Score=444, Expect=5e-155]} {Celegans: WBGene00006566, tgt-1, Queuine tRNA-ribosyltransferase catalytic subunit, [RH, Score=395, Expect=3e-136]} {Smed: dd_Smed_v6_11928_0_1, dd_Smed_v6_11928_0_1, [RH, Score=449, Expect=4e-157]} {RNA1509_24881} {RNA1310_13217} {RNA815_4983}
6.	MligTC455_31664	87	1.8	Mlig455_027842	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.990 Region-enriched R3: 3.194/0.01703		0.954	-	-	-	-	-	0.954	Mlig455_027842 {REF} {Length: 5811} {RNA1509_39420} {RNA1310_33165, RNA1509_39420} {RNA1509_39420, RNA815_15436.1}
7.	MligTC455_34045	50	1.03	Mlig455_000064	Neo: - Age: Up-Down-Down	EIF4G3	0.952	-	-	-	-	-	0.952	Mlig455_000064 {REF} {Length: 2033} {Human: ENSG00000075151, EIF4G3, eukaryotic translation initiation factor 4 gamma 3, [Score=50.8, Expect=3e-07]} {Mouse: ENSMUSG00000028760, Eif4g3, eukaryotic translation initiation factor 4 gamma, 3, [Score=52.0, Expect=1e-07]} {RNA1509_47493} {RNA1310_2285} {RNA815_8691.1}
8.	MligTC455_17442	76	1.59	Mlig455_046650, Mlig455_046672	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_046650 {REF} {Length: 2676} {RNA1310_43791} {RNA815_38592} Mlig455_046672 {REF} {Length: 2830} {RNA1310_43791} {RNA815_38592}

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