TomoSeq data search

Data search

Results for MligTC455_37861

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_37861

26

0.55

Mlig455_015320

Neo: -

Age: Up-Down-Up

NBAS

Mlig455_015320 {REF} {Length: 8596} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=49.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=380, Expect=1e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=410, Expect=8e-115]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=202, Expect=1e-51]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}

Cumulative graph for MligTC455_37861

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.821	1.047	1.00000	1.00000
RegionR2	0.175	1.047	0.81493	1.00000
RegionR3	0.57	1.047	0.60579	1.00000
RegionR4	2.593	1.047	0.13826	0.37908
RegionR5	1.352	1.047	0.25458	0.57234
RegionR6	0.442	1.047	0.69233	1.00000
RegionR7	-0.199	1.047	0.89154	1.00000
RegionR8	-4.113	1.047	1.00000	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.694	1.047	0.99995	1.00000
RegenerationR2	0.128	1.047	0.96091	1.00000
RegenerationR3	-0.901	1.047	0.46749	0.84230
RegenerationR4	-1.713	1.047	0.25819	0.70592
RegenerationR5	0.477	1.047	0.67178	0.94150
RegenerationR6	-2.349	1.047	0.15691	0.48433
RegenerationBL	-0.438	1.047	0.99972	1.00000
RegenerationTP	-1.242	1.047	0.99977	1.00000

Genes with expression patterns similar to MligTC455_37861

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_37861	26	0.55	Mlig455_015320	Neo: - Age: Up-Down-Up	NBAS	3	1.000	1.000	-	-	-	1.000	Mlig455_015320 {REF} {Length: 8596} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=49.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=380, Expect=1e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=410, Expect=8e-115]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=202, Expect=1e-51]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}
2.	MligTC455_37862	39	0.81	Mlig455_068748	Neo: - Age: -	NBAS	2.878	0.942	0.988	-	-	-	0.948	Mlig455_068748 {REF} {Length: 8968} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=45.8]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=34.8]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=378, Expect=9e-105]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=405, Expect=3e-113]} {Celegans: WBGene00008990, smgl-1, [RH, Score=57.8, Expect=1e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=203, Expect=4e-52]} {RNA1509_11685} {RNA1310_353.1} {RNA815_138}
3.	MligTC455_20610	38	0.8	Mlig455_028284	Neo: - Age: Up-Down-Up Region-enriched R5: 3.023/0.01796	HIST2H3C	0.977	-	-	-	-	-	0.977	Mlig455_028284 {REF} {Length: 2107} {Pfam: Core histone H2A/H2B/H3/H4 [PF00125.26, score=179.6]; Centromere kinetochore component CENP-T histone fold [PF15511.8, score=25.5]; CENP-S protein [PF15630.8, score=21.5]; PCNA-associated factor histone like domain [PF15715.7, score=21.0]} {Human: ENSG00000203811, HIST2H3C, histone cluster 2 H3 family member c, [RH, Score=271, Expect=4e-95]; ENSG00000183598, HIST2H3D, histone cluster 2 H3 family member d, [RH, Score=271, Expect=4e-95]; ENSG00000203852, HIST2H3A, histone cluster 2 H3 family member a, [RH, Score=271, Expect=4e-95]; ENSG00000275714, HIST1H3A, histone cluster 1 H3 family member a, [RH, Score=268, Expect=4e-94]; ENSG00000273983, HIST1H3G, histone cluster 1 H3 family member g, [RH, Score=268, Expect=4e-94]; ENSG00000278828, HIST1H3H, histone cluster 1 H3 family member h, [RH, Score=268, Expect=4e-94]; ENSG00000274267, HIST1H3B, histone cluster 1 H3 family member b, [RH, Score=268, Expect=4e-94]; ENSG00000197153, HIST1H3J, histone cluster 1 H3 family member j, [RH, Score=268, Expect=4e-94]; ENSG00000274750, HIST1H3E, histone cluster 1 H3 family member e, [RH, Score=268, Expect=4e-94]; ENSG00000275379, HIST1H3I, histone cluster 1 H3 family member i, [RH, Score=268, Expect=4e-94]; ENSG00000277775, HIST1H3F, histone cluster 1 H3 family member f, [RH, Score=268, Expect=4e-94]; ENSG00000278272, HIST1H3C, histone cluster 1 H3 family member c, [RH, Score=268, Expect=4e-94]; ENSG00000197409, HIST1H3D, histone cluster 1 H3 family member d, [RH, Score=268, Expect=4e-94]; ENSG00000163041, H3F3A, H3 histone family member 3A, [RH, Score=267, Expect=2e-93]; ENSG00000132475, H3F3B, H3 histone family member 3B, [RH, Score=267, Expect=2e-93]; ENSG00000168148, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000285435, HIST3H3, histone cluster 3 H3, [RH, Score=263, Expect=4e-92]; ENSG00000203818, HIST2H3PS2, histone cluster 2 H3 pseudogene 2, [RH, Score=263, Expect=6e-92]} {Mouse: ENSMUSG00000081058, Hist2h3c2, histone cluster 2, H3c2, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069273, Hist1h3e, histone cluster 1, H3e, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069267, Hist1h3b, histone cluster 1, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000074403, Hist2h3b, histone cluster 2, H3b, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069310, Hist1h3c, histone cluster 1, H3c, [RH, Score=271, Expect=3e-95]; ENSMUSG00000100210, Hist1h3f, histone cluster 1, H3f, [RH, Score=271, Expect=3e-95]; ENSMUSG00000093769, Hist2h3c1, histone cluster 2, H3c1, [RH, Score=271, Expect=3e-95]; ENSMUSG00000099583, Hist1h3d, histone cluster 1, H3d, [RH, Score=271, Expect=3e-95]; ENSMUSG00000069265, Hist1h3a, histone cluster 1, H3a, [RH, Score=268, Expect=2e-94]; ENSMUSG00000099517, Hist1h3g, histone cluster 1, H3g, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101972, Hist1h3i, histone cluster 1, H3i, [RH, Score=268, Expect=2e-94]; ENSMUSG00000101355, Hist1h3h, histone cluster 1, H3h, [RH, Score=268, Expect=2e-94]; ENSMUSG00000016559, H3f3b, H3 histone, family 3B, [RH, Score=267, Expect=1e-93]; ENSMUSG00000060743, H3f3a, H3 histone, family 3A, [RH, Score=267, Expect=1e-93]} {Dmel: FBgn0051613, His3:CG31613, [RH, Score=271, Expect=2e-95]} {Celegans: WBGene00001945, his-71, Histone H3.3 type 1, [RH, Score=266, Expect=9e-94]} {Smed: dd_Smed_v6_13347_0_1, dd_Smed_v6_13347_0_1, [RH, Score=271, Expect=1e-95]} {RNA1509_6806} {RNA1310_31846.2} {RNA815_19717.1}
4.	MligTC455_30196	90	1.87	Mlig455_037120	Neo: - Age: -	CBWD2	0.969	-	-	-	-	-	0.969	Mlig455_037120 {REF} {Length: 5192} {TRANSSPLICED} {Pfam: CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=158.4]; DALR anticodon binding domain [PF05746.17, score=33.9]; Cobalamin synthesis protein cobW C-terminal domain [PF07683.16, score=30.8]} {Human: ENSG00000136682, CBWD2, COBW domain containing 2, [RH, Score=238, Expect=2e-70]; ENSG00000172785, CBWD1, COBW domain containing 1, [RH, Score=238, Expect=4e-70]; ENSG00000196873, CBWD3, COBW domain containing 3, [RH, Score=233, Expect=3e-68]; ENSG00000147996, CBWD5, COBW domain containing 5, [RH, Score=231, Expect=8e-68]; ENSG00000215126, CBWD6, COBW domain containing 6, [RH, Score=228, Expect=2e-66]} {Mouse: ENSMUSG00000024878, Cbwd1, COBW domain containing 1, [RH, Score=246, Expect=2e-73]} {Smed: dd_Smed_v6_9040_0_1, dd_Smed_v6_9040_0_1, [RH, Score=207, Expect=2e-61]} {RNA1509_36947} {RNA1310_5600.1, RNA1509_36947} {RNA1509_36947, RNA815_2267.1}
5.	MligTC455_30198	84	1.75	Mlig455_052222	Neo: - Age: Down-Up-Down	CBWD2	0.967	-	-	-	-	-	0.967	Mlig455_052222 {REF} {Length: 2997} {TRANSSPLICED} {Pfam: CobW/HypB/UreG, nucleotide-binding domain [PF02492.21, score=158.2]; Cobalamin synthesis protein cobW C-terminal domain [PF07683.16, score=29.8]; DALR anticodon binding domain [PF05746.17, score=29.5]} {Human: ENSG00000136682, CBWD2, COBW domain containing 2, [RH, Score=241, Expect=2e-71]; ENSG00000172785, CBWD1, COBW domain containing 1, [RH, Score=241, Expect=3e-71]; ENSG00000196873, CBWD3, COBW domain containing 3, [RH, Score=236, Expect=1e-69]; ENSG00000147996, CBWD5, COBW domain containing 5, [RH, Score=235, Expect=5e-69]; ENSG00000215126, CBWD6, COBW domain containing 6, [RH, Score=231, Expect=1e-67]} {Mouse: ENSMUSG00000024878, Cbwd1, COBW domain containing 1, [RH, Score=249, Expect=1e-74]} {Smed: dd_Smed_v6_9040_0_1, dd_Smed_v6_9040_0_1, [RH, Score=207, Expect=2e-61]} {RNA1509_36947} {RNA1310_5600.1} {RNA815_2267.1}
6.	MligTC455_15275	116	2.42	Mlig455_053112	Neo: - Age: Down-Up-Down		0.953	-	-	-	-	-	0.953	Mlig455_053112 {REF} {Length: 1920} {TRANSSPLICED} {tRNA: Ala(CGC),pseudo, score=31.3} {RNA1509_24967} {RNA1310_40192} {RNA815_19718}
7.	MligTC455_46976	30	0.63	Mlig455_065750	Neo: - Age: -		0.953	-	-	-	-	-	0.953	Mlig455_065750 {REF} {Length: 2493} {RNA1509_22566} {RNA1310_4083.1} {RNA815_16114}
8.	MligTC455_31664	87	1.8	Mlig455_027842	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.990 Region-enriched R3: 3.194/0.01703		0.95	-	-	-	-	-	0.950	Mlig455_027842 {REF} {Length: 5811} {RNA1509_39420} {RNA1310_33165, RNA1509_39420} {RNA1509_39420, RNA815_15436.1}

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