Data search


search
Exact
Search

Results for MligTC455_30259

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30259 164 3.42 Mlig455_067891

Neo: -

Age: -

Mlig455_067891 {REF} {Length: 4972} {TRANSSPLICED} {RNA1509_27782} {RNA1310_12111} {RNA815_5159.1}

Cumulative graph for MligTC455_30259

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -4.865 2.538 0.32516 0.97364
RegionR2 1.09 2.538 0.34245 0.73457
RegionR3 0.203 2.538 0.77535 1.00000
RegionR4 0.847 2.538 0.43363 0.76253
RegionR5 1.515 2.538 0.05435 0.19887
RegionR6 0.756 2.538 0.44969 1.00000
RegionR7 -1.209 2.538 0.99336 1.00000
RegionR8 1.663 2.538 0.19675 0.79304

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.149 2.538 0.99992 1.00000
RegenerationR2 0.355 2.538 0.57751 0.90564
RegenerationR3 0.755 2.538 0.33355 0.75890
RegenerationR4 -0.422 2.538 0.58035 0.90555
RegenerationR5 -0.01 2.538 0.99019 1.00000
RegenerationR6 0.341 2.538 0.65509 0.90082
RegenerationBL 1.036 2.538 0.28901 0.65096
RegenerationTP 0.555 2.538 0.63054 0.97809


Genes with expression patterns similar to MligTC455_30259

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30259 164 3.42 Mlig455_067891

Neo: -

Age: -

6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_067891 {REF} {Length: 4972} {TRANSSPLICED} {RNA1509_27782} {RNA1310_12111} {RNA815_5159.1}
2. MligTC455_30257 138 2.87 Mlig455_066393

Neo: -

Age: -

Region-enriched R5: 2.470/0.00815

3.61 0.971 0.942 0.808 - - 0.889 Mlig455_066393 {REF} {Length: 2962} {TRANSSPLICED} {RNA1509_27782} {RNA1310_12111} {RNA815_14232}
3. MligTC455_39417 2459 51.22 Mlig455_053947

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.367

0.977 - - - - 0.977 - Mlig455_053947 {REF} {Length: 3184} {RNA1509_19407} {RNA1310_3937} {RNA815_2591.1}
4. MligTC455_45865 1422 29.62 Mlig455_044968, Mlig455_044981, Mlig455_044993, Mlig455_055500

Neo: -

Age: -

Region-enriched R2: 2.439/0.00202

ANK2, ANK3 0.969 - - - - 0.969 -

Mlig455_044968 {REF} {Length: 2222} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.6]; Ankyrin repeat [PF00023.32, score=97.7]; Ankyrin repeats (many copies) [PF13857.8, score=85.9]; Ankyrin repeat [PF13606.8, score=79.3]; Ankyrin repeats (many copies) [PF13637.8, score=73.3]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=112, Expect=3e-25]; ENSG00000145362, ANK2, ankyrin 2, [Score=112, Expect=2e-25]; ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [Score=107, Expect=9e-24]; ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [Score=107, Expect=1e-23]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=114, Expect=4e-26]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=114, Expect=2e-26]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=103, Expect=7e-23]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=105, Expect=6e-24]} {RNA1509_57010} {RNA1310_16152} {RNA815_19238}

Mlig455_044981 {REF} {Length: 7748} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=84.4]; Ankyrin repeat [PF00023.32, score=67.2]; Ankyrin repeats (many copies) [PF13857.8, score=42.8]; Ankyrin repeat [PF13606.8, score=40.9]; Ankyrin repeats (many copies) [PF13637.8, score=23.4]} {Human: ENSG00000145362, ANK2, ankyrin 2, [Score=62.4, Expect=2e-10]; ENSG00000146926, ASB10, ankyrin repeat and SOCS box containing 10, [Score=62.0, Expect=3e-10]; ENSG00000151150, ANK3, ankyrin 3, [Score=61.6, Expect=5e-10]; ENSG00000029534, ANK1, ankyrin 1, [Score=59.3, Expect=3e-09]} {Mouse: ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=65.9, Expect=1e-11]; ENSMUSG00000038204, Asb10, ankyrin repeat and SOCS box-containing 10, [Score=63.2, Expect=7e-11]} {Dmel: FBgn0031473, CG3104, [Score=59.7, Expect=5e-10]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=52.4, Expect=2e-07]} {Smed: dd_Smed_v6_9936_0_1, dd_Smed_v6_9936_0_1, [Score=62.8, Expect=5e-11]} {RNA1509_59330} {RNA1310_2367} {RNA815_1531}

Mlig455_044993 {REF} {Length: 2286} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=154.1]; Ankyrin repeat [PF00023.32, score=97.7]; Ankyrin repeats (many copies) [PF13857.8, score=85.8]; Ankyrin repeat [PF13606.8, score=79.3]; Ankyrin repeats (many copies) [PF13637.8, score=73.0]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=112, Expect=3e-25]; ENSG00000145362, ANK2, ankyrin 2, [Score=111, Expect=5e-25]; ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [Score=107, Expect=1e-23]; ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [Score=107, Expect=9e-24]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=113, Expect=8e-26]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=108, Expect=4e-24]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=115, Expect=2e-26]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=103, Expect=1e-22]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=105, Expect=1e-23]} {RNA1509_28218} {RNA1310_16152} {RNA815_19238}

Mlig455_055500 {REF} {Length: 3956} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=114.6]; Ankyrin repeat [PF00023.32, score=97.7]; Ankyrin repeats (many copies) [PF13857.8, score=85.9]; Ankyrin repeat [PF13606.8, score=79.3]; Ankyrin repeats (many copies) [PF13637.8, score=73.3]} {Human: ENSG00000151150, ANK3, ankyrin 3, [Score=112, Expect=3e-25]; ENSG00000145362, ANK2, ankyrin 2, [Score=112, Expect=2e-25]; ENSG00000131503, ANKHD1, ankyrin repeat and KH domain containing 1, [Score=107, Expect=9e-24]; ENSG00000254996, ANKHD1-EIF4EBP3, ANKHD1-EIF4EBP3 readthrough, [Score=107, Expect=1e-23]} {Mouse: ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=114, Expect=4e-26]} {Dmel: FBgn0043884, mask, multiple ankyrin repeats single KH domain, [Score=114, Expect=2e-26]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=103, Expect=7e-23]} {Smed: dd_Smed_v6_10835_0_1, dd_Smed_v6_10835_0_1, [Score=105, Expect=6e-24]} {RNA1509_28218, RNA1509_57010} {RNA1310_15834, RNA1509_28218, RNA1509_57010} {RNA1509_28218, RNA1509_57010, RNA815_19238}
5. MligTC455_17865 2593 54.02 Mlig455_034927

Neo: -

Age: Down-Up-Up

FANK1 0.966 - - - - 0.966 - Mlig455_034927 {REF} {Length: 1596} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=107.8]; Ankyrin repeats (3 copies) [PF12796.9, score=102.8]; Ankyrin repeats (many copies) [PF13857.8, score=85.2]; Ankyrin repeat [PF00023.32, score=73.5]; Ankyrin repeat [PF13606.8, score=64.1]} {Human: ENSG00000203780, FANK1, fibronectin type III and ankyrin repeat domains 1, [Score=174, Expect=7e-51]} {Mouse: ENSMUSG00000053111, Fank1, fibronectin type 3 and ankyrin repeat domains 1, [RH, Score=174, Expect=7e-51]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=93.2, Expect=3e-20]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=94.7, Expect=8e-21]} {Smed: dd_Smed_v6_7571_0_2, dd_Smed_v6_7571_0_2, [RH, Score=253, Expect=9e-82]} {RNA1509_6757} {RNA1310_18708, RNA1509_6757} {RNA1509_6757, RNA815_8175}
6. MligTC455_29173 380 7.93 Mlig455_031607

Neo: -

Age: -

ANKRD42 0.962 - - - - 0.962 - Mlig455_031607 {REF} {Length: 7774} {TRANSSPLICED} {Pfam: Ankyrin repeats (many copies) [PF13637.8, score=128.5]; Ankyrin repeats (3 copies) [PF12796.9, score=121.4]; Ankyrin repeats (many copies) [PF13857.8, score=115.0]; Ankyrin repeat [PF13606.8, score=88.5]; Ankyrin repeat [PF00023.32, score=78.1]} {Human: ENSG00000137494, ANKRD42, ankyrin repeat domain 42, [RH, Score=501, Expect=9e-174]} {Mouse: ENSMUSG00000041343, Ankrd42, ankyrin repeat domain 42, [RH, Score=497, Expect=4e-172]} {Dmel: FBgn0261788, Ank2, Ankyrin 2, [Score=144, Expect=7e-36]} {Celegans: WBGene00006780, unc-44, AO66 ankyrin, [Score=129, Expect=3e-31]} {Smed: dd_Smed_v6_10615_0_1, dd_Smed_v6_10615_0_1, [RH, Score=623, Expect=0.0]} {RNA1509_19358} {RNA1310_610.2} {RNA815_2353.1}
7. MligTC455_49160 129 2.68 Mlig455_062354

Neo: -

Age: -

0.962 - - - - - 0.962 Mlig455_062354 {REF} {Length: 383} {NoTransDecoderORF} {RNA1509_40326} {RNA1310_30049}
8. MligTC455_16227 57 1.2 Mlig455_059119

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.809

0.961 - - - - 0.961 - Mlig455_059119 {REF} {Length: 2862} {Smed: dd_Smed_v6_16150_0_1, dd_Smed_v6_16150_0_1, [RH, Score=95.9, Expect=5e-21]} {RNA1509_34395} {RNA1310_13154} {RNA815_10500}
9. MligTC455_41091 430 8.97 Mlig455_034010

Neo: Irradiation

Age: Up-Down-Down, logFC(26M/2M)=0.291

MFSD2A 0.959 - - - - - 0.959 Mlig455_034010 {REF} {Length: 4857} {TRANSSPLICED} {Pfam: MFS/sugar transport protein [PF13347.8, score=279.8]; Major Facilitator Superfamily [PF07690.18, score=41.3]; Sugar (and other) transporter [PF00083.26, score=19.9]} {Human: ENSG00000168389, MFSD2A, major facilitator superfamily domain containing 2A, [Score=248, Expect=6e-74]} {Mouse: ENSMUSG00000028655, Mfsd2a, major facilitator superfamily domain containing 2A, [Score=245, Expect=8e-73]} {Smed: dd_Smed_v6_11210_0_1, dd_Smed_v6_11210_0_1, [Score=283, Expect=4e-87]} {RNA1509_14841} {RNA1310_5304} {RNA815_20517}
10. MligTC455_46745 334 6.95 Mlig455_034170

Neo: -

Age: -

ANKRD12 0.959 - - - - - 0.959 Mlig455_034170 {REF} {Length: 4585} {TRANSSPLICED} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=26.8]; Ankyrin repeat [PF00023.32, score=23.4]; Ankyrin repeats (many copies) [PF13857.8, score=21.1]} {Human: ENSG00000101745, ANKRD12, ankyrin repeat domain 12, [RH, Score=128, Expect=3e-29]} {Mouse: ENSMUSG00000034647, Ankrd12, ankyrin repeat domain 12, [RH, Score=129, Expect=1e-29]} {Dmel: FBgn0036305, CG10984, [RH, Score=110, Expect=1e-24]} {Smed: dd_Smed_v6_9297_0_1, dd_Smed_v6_9297_0_1, [RH, Score=155, Expect=1e-38]} {RNA1509_17750} {RNA1310_3406} {RNA815_33283}
11. MligTC455_20533 1376 28.68 Mlig455_029972

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_029972 {REF} {Length: 2855} {Pfam: UPF0489 domain [PF12640.9, score=39.5]} {Dmel: FBgn0030191, CG15306, [Score=55.5, Expect=1e-07]} {Smed: dd_Smed_v6_7217_0_1, dd_Smed_v6_7217_0_1, [RH, Score=52.8, Expect=6e-07]} {RNA1509_3030} {RNA1310_9364} {RNA815_2565.1}
12. MligTC455_21593 425 8.84 Mlig455_013101, Mlig455_013193

Neo: -

Age: Down-Down-Up

0.957 - - - - 0.957 -

Mlig455_013101 {REF} {Length: 542} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}

Mlig455_013193 {REF} {Length: 528} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}
13. MligTC455_16252 422 8.8 Mlig455_047309

Neo: -

Age: Down-Up-Up

GRIK3 0.952 - - - - 0.952 - Mlig455_047309 {REF} {Length: 3394} {Pfam: Ligand-gated ion channel [PF00060.28, score=64.4]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=31.1]; S1 RNA binding domain [PF00575.25, score=19.2]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=85.5, Expect=2e-16]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=85.1, Expect=3e-16]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=84.0, Expect=7e-16]} {Mouse: ENSMUSG00000022935, Grik1, glutamate receptor, ionotropic, kainate 1, [Score=88.2, Expect=2e-17]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=84.3, Expect=4e-16]} {Dmel: FBgn0038840, Grik, [Score=71.6, Expect=2e-12]} {Smed: dd_Smed_v6_10048_0_1, dd_Smed_v6_10048_0_1, [RH, Score=105, Expect=5e-23]} {RNA1509_9480} {RNA1310_5319.1, RNA1509_9480} {RNA1509_9480, RNA815_1612}
14. MligTC455_32430 1195 24.9 Mlig455_011237

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.184/0.00516

MYO7A 0.951 - - - - 0.951 - Mlig455_011237 {REF} {Length: 9218} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=618.5]; MyTH4 domain [PF00784.19, score=207.6]; FERM central domain [PF00373.20, score=76.8]; IQ calmodulin-binding motif [PF00612.29, score=52.2]; Variant SH3 domain [PF14604.8, score=31.6]; Variant SH3 domain [PF07653.19, score=23.3]; FERM N-terminal domain [PF09379.12, score=19.5]} {Human: ENSG00000137474, MYO7A, myosin VIIA, [RH, Score=2524, Expect=0.0]} {Mouse: ENSMUSG00000030761, Myo7a, myosin VIIA, [RH, Score=2538, Expect=0.0]} {Dmel: FBgn0000317, ck, crinkled, [RH, Score=2582, Expect=0.0]} {Celegans: WBGene00002039, hum-6, Unconventional myosin heavy chain 6, [RH, Score=1936, Expect=0.0]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [RH, Score=2107, Expect=0.0]} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1310_167.1, RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893, RNA815_130.1}
15. MligTC455_41038 801 16.69 Mlig455_012354

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.400

DCN 0.951 - - - - 0.951 - Mlig455_012354 {REF} {Length: 1988} {Pfam: Leucine rich repeat [PF13855.8, score=49.8]; Leucine Rich repeats (2 copies) [PF12799.9, score=43.2]; Leucine-rich repeat [PF14580.8, score=24.1]} {Human: ENSG00000011465, DCN, decorin, [Score=68.9, Expect=4e-12]; ENSG00000126500, FLRT1, fibronectin leucine rich transmembrane protein 1, [Score=66.2, Expect=7e-11]} {Mouse: ENSMUSG00000047787, Flrt1, fibronectin leucine rich transmembrane protein 1, [Score=66.2, Expect=5e-11]; ENSMUSG00000051379, Flrt3, fibronectin leucine rich transmembrane protein 3, [Score=65.1, Expect=1e-10]} {Dmel: FBgn0261674, CG42709, [Score=50.1, Expect=3e-06]} {Celegans: WBGene00004854, slt-1, Slit homolog 1 protein, [Score=62.4, Expect=6e-10]} {Smed: dd_Smed_v6_6669_0_1, dd_Smed_v6_6669_0_1, [Score=61.2, Expect=8e-10]} {RNA1509_8353} {RNA1310_14213} {RNA815_5583}
16. MligTC455_49366 486 10.13 Mlig455_023586, Mlig455_050166

Neo: Int S/G2/M

Age: logFC(26M/2M)=0.530

Region-enriched R5: 1.681/0.03689

NCBP3 0.95 - - - - - 0.950

Mlig455_023586 {REF} {Length: 3671} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=59.9]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_39208, RNA1509_50478, RNA1509_6697} {RNA1310_4269, RNA1509_39208, RNA1509_50478} {RNA1509_39208, RNA1509_50478, RNA815_8318}

Mlig455_050166 {REF} {Length: 3689} {TRANSSPLICED} {Pfam: Nuclear cap-binding protein subunit 3 [PF10309.11, score=59.9]} {Human: ENSG00000074356, NCBP3, nuclear cap binding subunit 3, [RH, Score=100, Expect=3e-21]} {Mouse: ENSMUSG00000020783, Ncbp3, nuclear cap binding subunit 3, [RH, Score=100, Expect=2e-21]} {Smed: dd_Smed_v6_4238_0_1, dd_Smed_v6_4238_0_1, [RH, Score=68.9, Expect=2e-12]} {RNA1509_50478} {RNA1310_4269} {RNA815_8318}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA