M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_32430

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_32430 1195 24.90 Mlig455_011237

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.184/0.00516

 MYO7A Mlig455_011237 {REF} {Length: 9218} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=618.5]; MyTH4 domain [PF00784.19, score=207.6]; FERM central domain [PF00373.20, score=76.8]; IQ calmodulin-binding motif [PF00612.29, score=52.2]; Variant SH3 domain [PF14604.8, score=31.6]; Variant SH3 domain [PF07653.19, score=23.3]; FERM N-terminal domain [PF09379.12, score=19.5]} {Human: ENSG00000137474, MYO7A, myosin VIIA, [RH, Score=2524, Expect=0.0]} {Mouse: ENSMUSG00000030761, Myo7a, myosin VIIA, [RH, Score=2538, Expect=0.0]} {Dmel: FBgn0000317, ck, crinkled, [RH, Score=2582, Expect=0.0]} {Celegans: WBGene00002039, hum-6, Unconventional myosin heavy chain 6, [RH, Score=1936, Expect=0.0]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [RH, Score=2107, Expect=0.0]} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1310_167.1, RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893, RNA815_130.1}

Cumulative graph for MligTC455_32430

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -7.448 4.816 0.01279 0.31961
RegionR2 0.407 4.816 0.62200 0.96595
RegionR3 0.359 4.816 0.65049 1.00000
RegionR4 1.647 4.816 0.00903 0.05653
RegionR5 0.166 4.816 0.77163 1.00000
RegionR6 1.028 4.816 0.11086 0.60782
RegionR7 1.655 4.816 0.00319 0.08076
RegionR8 2.184 4.816 0.00005 0.00516

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.312 4.816 1.00000 1.00000
RegenerationR2 0.386 4.816 0.21990 0.66761
RegenerationR3 -0.239 4.816 0.51607 0.86453
RegenerationR4 -0.837 4.816 0.02875 0.27252
RegenerationR5 -0.407 4.816 0.26864 0.70004
RegenerationR6 -1.095 4.816 0.00417 0.07763
RegenerationBL -0.384 4.816 0.28582 0.64763
RegenerationTP -1.045 4.816 0.00766 0.14697


Genes with expression patterns similar to MligTC455_32430

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_32430 1195 24.9 Mlig455_011237

Neo: -

Age: Up-Down-Down

Region-enriched R8: 2.184/0.00516

 MYO7A 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_011237 {REF} {Length: 9218} {TRANSSPLICED} {Pfam: Myosin head (motor domain) [PF00063.23, score=618.5]; MyTH4 domain [PF00784.19, score=207.6]; FERM central domain [PF00373.20, score=76.8]; IQ calmodulin-binding motif [PF00612.29, score=52.2]; Variant SH3 domain [PF14604.8, score=31.6]; Variant SH3 domain [PF07653.19, score=23.3]; FERM N-terminal domain [PF09379.12, score=19.5]} {Human: ENSG00000137474, MYO7A, myosin VIIA, [RH, Score=2524, Expect=0.0]} {Mouse: ENSMUSG00000030761, Myo7a, myosin VIIA, [RH, Score=2538, Expect=0.0]} {Dmel: FBgn0000317, ck, crinkled, [RH, Score=2582, Expect=0.0]} {Celegans: WBGene00002039, hum-6, Unconventional myosin heavy chain 6, [RH, Score=1936, Expect=0.0]} {Smed: dd_Smed_v6_5823_0_1, dd_Smed_v6_5823_0_1, [RH, Score=2107, Expect=0.0]} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1310_167.1, RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893} {RNA1509_1498, RNA1509_16258, RNA1509_17857, RNA1509_27893, RNA815_130.1}
2. MligTC455_54076 715 14.9 Mlig455_015419

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.789

 CUBN 4.138 0.847 0.746 0.953 0.775 - 0.817 Mlig455_015419 {REF} {Length: 1794} {Pfam: CUB domain [PF00431.22, score=65.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=63.2, Expect=4e-10]; ENSG00000095587, TLL2, tolloid like 2, [Score=61.6, Expect=1e-09]; ENSG00000187908, DMBT1, deleted in malignant brain tumors 1, [Score=60.8, Expect=2e-09]; ENSG00000038295, TLL1, tolloid like 1, [Score=60.1, Expect=4e-09]} {Mouse: ENSMUSG00000026726, Cubn, cubilin (intrinsic factor-cobalamin receptor), [Score=72.0, Expect=4e-13]} {Dmel: FBgn0004885, tok, tolkin, [Score=58.9, Expect=4e-09]} {Smed: dd_Smed_v6_5652_0_1, dd_Smed_v6_5652_0_1, [Score=64.7, Expect=4e-11]} {RNA1509_9300} {RNA1310_18452, RNA1509_9300} {RNA1509_9300, RNA815_8451}
3. MligTC455_32306 476 9.91 Mlig455_011146

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.714

 4.135 - 0.840 0.866 0.755 0.972 0.702 Mlig455_011146 {REF} {Length: 15000} {RNA1509_4044, RNA1509_4722} {RNA1310_655.1, RNA1509_4044} {RNA1509_4044, RNA815_335.1}
4. MligTC455_38148 787 16.4 Mlig455_067155

Neo: -

Age: -

 FAT1 3.744 - - 0.881 0.983 0.955 0.925 Mlig455_067155 {REF} {Length: 4823} {Pfam: Cadherin domain [PF00028.19, score=183.7]; EGF-like domain [PF00008.29, score=55.8]; Calcium-binding EGF domain [PF07645.17, score=31.4]; Laminin G domain [PF02210.26, score=24.7]} {Human: ENSG00000083857, FAT1, FAT atypical cadherin 1, [Score=292, Expect=3e-79]} {Mouse: ENSMUSG00000070047, Fat1, FAT atypical cadherin 1, [Score=299, Expect=2e-81]} {Dmel: FBgn0261574, kug, kugelei, [Score=213, Expect=3e-55]} {Celegans: WBGene00000396, cdh-4, Cadherin-4, [Score=189, Expect=9e-48]} {Smed: dd_Smed_v6_7638_0_1, dd_Smed_v6_7638_0_1, [Score=218, Expect=1e-56]} {RNA1509_13557} {RNA1310_1912.1} {RNA815_14235}
5. MligTC455_42171 910 18.96 Mlig455_050223

Neo: -

Age: -

Region-enriched R2: 1.714/0.04973

 3.5 - 0.802 - 0.801 0.962 0.935 Mlig455_050223 {REF} {Length: 2134} {Pfam: Innexin [PF00876.20, score=296.2]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=95.5, Expect=5e-21]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=208, Expect=6e-62]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=276, Expect=2e-87]} {RNA1509_10527} {RNA1310_14408} {RNA815_844.2}
6. MligTC455_36396 627 13.06 Mlig455_019585, Mlig455_028553, Mlig455_064739

Neo: -

Age: Down-Up-Up

 UPP1 3.357 - 0.782 0.862 0.965 0.748 -

Mlig455_019585 {REF} {Length: 207} {NoTransDecoderORF} {RNA1509_11745} {RNA1310_50394} {RNA815_2064.1}

Mlig455_028553 {REF} {Length: 1227} {Pfam: Phosphorylase superfamily [PF01048.22, score=98.0]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=265, Expect=2e-87]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=256, Expect=4e-84]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=269, Expect=3e-89]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=260, Expect=9e-86]} {Dmel: FBgn0039464, CG6330, [RH, Score=259, Expect=1e-84]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=194, Expect=2e-60]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=199, Expect=1e-62]} {RNA1509_11745} {RNA1310_7741.1} {RNA815_2064.1}

Mlig455_064739 {REF} {Length: 1387} {Pfam: Phosphorylase superfamily [PF01048.22, score=95.6]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=268, Expect=1e-88]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=263, Expect=1e-86]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=273, Expect=8e-91]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=265, Expect=2e-87]} {Dmel: FBgn0039464, CG6330, [RH, Score=265, Expect=8e-87]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=205, Expect=2e-64]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=201, Expect=4e-63]} {RNA1509_11239} {RNA1310_7897.2} {RNA815_2064.1}
7. MligTC455_27358 1252 26.09 Mlig455_049756

Neo: -

Age: -

Region-enriched R8: 1.720/0.00404

 SLCO4A1 3.308 0.800 0.837 - - 0.720 0.951 Mlig455_049756 {REF} {Length: 2819} {Pfam: Organic Anion Transporter Polypeptide (OATP) family [PF03137.22, score=478.0]; Major Facilitator Superfamily [PF07690.18, score=71.9]; Kazal-type serine protease inhibitor domain [PF07648.17, score=21.1]} {Human: ENSG00000101187, SLCO4A1, solute carrier organic anion transporter family member 4A1, [RH, Score=410, Expect=1e-132]} {Mouse: ENSMUSG00000038963, Slco4a1, solute carrier organic anion transporter family, member 4a1, [RH, Score=421, Expect=6e-137]} {Dmel: FBgn0051634, Oatp26F, Organic anion transporting polypeptide 26F, [RH, Score=397, Expect=2e-128]} {Celegans: WBGene00013499, Y70G10A.3, Solute carrier organic anion transporter family member, [RH, Score=335, Expect=6e-105]} {Smed: dd_Smed_v6_8289_0_1, dd_Smed_v6_8289_0_1, [Score=163, Expect=4e-42]} {RNA1509_13547} {RNA1310_6439} {RNA815_1321.1}
8. MligTC455_32309 828 17.24 Mlig455_050857

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.573

 ZAN 3.286 0.752 0.787 - 0.792 0.955 - Mlig455_050857 {REF} {Length: 9674} {Human: ENSG00000146839, ZAN, zonadhesin (gene/pseudogene), [Score=57.8, Expect=5e-07]} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_458, RNA1509_7032} {RNA1310_3777.1, RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032} {RNA1509_20499, RNA1509_31314, RNA1509_37922, RNA1509_38195, RNA1509_7032, RNA815_49.1}
9. MligTC455_21914 6688 139.34 Mlig455_041245, Mlig455_053092

Neo: -

Age: -

 FLNB 3.28 - 0.718 0.842 0.765 0.955 -

Mlig455_041245 {REF} {Length: 5323} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=341.5]} {Human: ENSG00000136068, FLNB, filamin B, [Score=238, Expect=1e-62]; ENSG00000196924, FLNA, filamin A, [Score=230, Expect=3e-60]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=243, Expect=1e-64]} {Dmel: FBgn0028371, jbug, jitterbug, [RH, Score=429, Expect=2e-124]} {Celegans: WBGene00016006, fln-2, FiLamiN (Actin binding protein) homolog, [RH, Score=469, Expect=3e-139]} {Smed: dd_Smed_v6_14262_0_1, dd_Smed_v6_14262_0_1, [RH, Score=265, Expect=2e-73]} {RNA1509_1061} {RNA1310_1557.1, RNA1509_1061} {RNA1509_1061, RNA815_236}

Mlig455_053092 {REF} {Length: 4805} {Pfam: Filamin/ABP280 repeat [PF00630.21, score=342.0]} {Human: ENSG00000136068, FLNB, filamin B, [Score=239, Expect=4e-63]; ENSG00000196924, FLNA, filamin A, [Score=231, Expect=2e-60]} {Mouse: ENSMUSG00000031328, Flna, filamin, alpha, [Score=244, Expect=9e-65]} {Dmel: FBgn0028371, jbug, jitterbug, [RH, Score=430, Expect=1e-124]} {Celegans: WBGene00016006, fln-2, FiLamiN (Actin binding protein) homolog, [RH, Score=471, Expect=8e-140]} {Smed: dd_Smed_v6_14262_0_1, dd_Smed_v6_14262_0_1, [RH, Score=267, Expect=2e-74]} {RNA1509_1061} {RNA1310_1557.1} {RNA815_236}
10. MligTC455_30551 1025 21.35 Mlig455_023090, Mlig455_027761, Mlig455_039963

Neo: -

Age: -

 MAP3K19, MAP3K4, TNKS2 3.235 - 0.702 - 0.982 0.739 0.812

Mlig455_023090 {REF} {Length: 1558} {Pfam: Protein kinase domain [PF00069.27, score=168.9]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.5]; Fungal protein kinase [PF17667.3, score=29.9]; Phosphotransferase enzyme family [PF01636.25, score=23.8]; ABC1 atypical kinase-like domain [PF03109.18, score=20.6]} {Human: ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=134, Expect=3e-34]} {Mouse: ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=129, Expect=7e-33]; ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=125, Expect=2e-31]} {Dmel: FBgn0024329, Mekk1, [Score=129, Expect=7e-33]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=130, Expect=2e-33]} {Smed: dd_Smed_v6_5198_0_1, dd_Smed_v6_5198_0_1, [Score=108, Expect=3e-26]} {RNA1509_25366, RNA1509_28291, RNA1509_39879} {RNA1310_39116, RNA1509_25366, RNA1509_39879} {RNA1509_25366, RNA1509_39879, RNA815_9030.1}

Mlig455_027761 {REF} {Length: 3012} {Pfam: Protein kinase domain [PF00069.27, score=167.6]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=125.0]; Ankyrin repeats (3 copies) [PF12796.9, score=85.2]; Ankyrin repeats (many copies) [PF13637.8, score=60.2]; Ankyrin repeat [PF00023.32, score=56.0]; Ankyrin repeat [PF13606.8, score=54.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.2]; Fungal protein kinase [PF17667.3, score=27.7]; ABC1 atypical kinase-like domain [PF03109.18, score=23.8]} {Human: ENSG00000176601, MAP3K19, mitogen-activated protein kinase kinase kinase 19, [Score=132, Expect=3e-32]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=130, Expect=2e-30]; ENSG00000142733, MAP3K6, mitogen-activated protein kinase kinase kinase 6, [Score=127, Expect=1e-29]} {Mouse: ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=130, Expect=9e-31]; ENSMUSG00000014426, Map3k4, mitogen-activated protein kinase kinase kinase 4, [Score=125, Expect=6e-29]} {Dmel: FBgn0024329, Mekk1, [Score=128, Expect=4e-30]} {Celegans: WBGene00006443, pak-2, Serine/threonine-protein kinase pak-2, [Score=105, Expect=8e-24]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=109, Expect=1e-24]} {RNA1509_27731} {RNA1310_10050} {RNA815_9030.1}

Mlig455_039963 {REF} {Length: 912} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=78.3]; Ankyrin repeat [PF13606.8, score=60.2]; Ankyrin repeats (many copies) [PF13637.8, score=56.1]; Ankyrin repeats (many copies) [PF13857.8, score=50.9]; Ankyrin repeat [PF00023.32, score=46.6]; Protein kinase domain [PF00069.27, score=37.8]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=30.6]} {Human: ENSG00000107854, TNKS2, tankyrase 2, [Score=68.2, Expect=2e-11]} {Mouse: ENSMUSG00000024811, Tnks2, tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2, [Score=66.2, Expect=6e-11]} {Dmel: FBgn0027508, Tnks, tankyrase, [Score=52.4, Expect=9e-07]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=49.3, Expect=7e-06]} {Smed: dd_Smed_v6_6201_0_1, dd_Smed_v6_6201_0_1, [Score=57.0, Expect=2e-08]} {RNA1509_39395} {RNA1310_28166} {RNA815_10088.2}
11. MligTC455_40861 5298 110.38 Mlig455_009208

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.204

 STOM 2.662 - - 0.881 - 0.972 0.809 Mlig455_009208 {REF} {Length: 1586} {Pfam: SPFH domain / Band 7 family [PF01145.27, score=118.4]; SPFH domain-Band 7 family [PF13421.8, score=20.1]} {Human: ENSG00000148175, STOM, stomatin, [Score=251, Expect=2e-82]; ENSG00000133115, STOML3, stomatin like 3, [Score=241, Expect=2e-78]} {Mouse: ENSMUSG00000026880, Stom, stomatin, [Score=248, Expect=2e-81]} {Dmel: FBgn0260657, CG42540, [Score=261, Expect=3e-85]} {Celegans: WBGene00006063, sto-1, Stomatin-1, [Score=261, Expect=4e-86]} {Smed: dd_Smed_v6_6396_0_1, dd_Smed_v6_6396_0_1, [Score=291, Expect=1e-98]} {RNA1509_21648} {RNA1310_25287.1} {RNA815_14054.1}
12. MligTC455_20723 1908 39.76 Mlig455_026557

Neo: -

Age: -

 CCDC62 2.608 - - - 0.961 0.825 0.822 Mlig455_026557 {REF} {Length: 2509} {Human: ENSG00000130783, CCDC62, coiled-coil domain containing 62, [RH, Score=117, Expect=7e-27]} {Mouse: ENSMUSG00000061882, Ccdc62, coiled-coil domain containing 62, [RH, Score=122, Expect=1e-28]} {RNA1509_39993} {RNA1310_6237.1} {RNA815_13573}
13. MligTC455_27509 515 10.73 Mlig455_023080

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.476

 2.527 - - - 0.983 0.739 0.805 Mlig455_023080 {REF} {Length: 2939} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=39.0]; Ankyrin repeats (many copies) [PF13637.8, score=31.8]; Ankyrin repeat [PF00023.32, score=30.0]; Ankyrin repeat [PF13606.8, score=29.3]; Ankyrin repeats (many copies) [PF13857.8, score=24.6]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [Score=48.5, Expect=2e-06]} {RNA1509_26758} {RNA1310_10050} {RNA815_9030.1}
14. MligTC455_39417 2459 51.22 Mlig455_053947

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.367

 2.515 - 0.821 0.741 - 0.953 - Mlig455_053947 {REF} {Length: 3184} {RNA1509_19407} {RNA1310_3937} {RNA815_2591.1}
15. MligTC455_12650 370 7.71 Mlig455_061070

Neo: -

Age: Down-Up-Down

 2.448 - 0.759 - 0.960 0.729 - Mlig455_061070 {REF} {Length: 1121} {Pfam: Kazal-type serine protease inhibitor domain [PF00050.23, score=29.7]} {RNA1509_16147, RNA1509_16838} {RNA1310_38656.1, RNA1509_16147, RNA1509_16838} {RNA1509_16147, RNA1509_16838, RNA815_22118}
16. MligTC455_30000 1520 31.66 Mlig455_006409

Neo: -

Age: Down-Down-Up

 NOTCH1 2.433 - - 0.762 - 0.965 0.706 Mlig455_006409 {REF} {Length: 2677} {TRANSSPLICED} {Pfam: EGF-like domain [PF00008.29, score=198.7]; Human growth factor-like EGF [PF12661.9, score=99.3]; EGF-like domain [PF07974.15, score=23.3]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=306, Expect=2e-87]; ENSG00000134250, NOTCH2, notch 2, [Score=305, Expect=5e-87]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=312, Expect=1e-89]; ENSMUSG00000027878, Notch2, notch 2, [Score=300, Expect=9e-86]} {Dmel: FBgn0259685, crb, crumbs, [Score=291, Expect=1e-82]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=234, Expect=5e-64]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=236, Expect=9e-65]} {RNA1509_26892} {RNA1310_37026} {RNA815_11987.1}
17. MligTC455_47822 424 8.84 Mlig455_001731

Neo: -

Age: -

 PRKCB 2.423 - - - 0.973 0.727 0.723 Mlig455_001731 {REF} {Length: 5462} {Pfam: Protein kinase domain [PF00069.27, score=217.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=127.3]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=117.0]; C2 domain [PF00168.32, score=99.0]; Protein kinase C terminal domain [PF00433.26, score=34.8]} {Human: ENSG00000166501, PRKCB, protein kinase C beta, [RH, Score=993, Expect=0.0]; ENSG00000154229, PRKCA, protein kinase C alpha, [RH, Score=982, Expect=0.0]} {Mouse: ENSMUSG00000052889, Prkcb, protein kinase C, beta, [RH, Score=991, Expect=0.0]; ENSMUSG00000050965, Prkca, protein kinase C, alpha, [RH, Score=983, Expect=0.0]} {Dmel: FBgn0003091, Pkc53E, Protein C kinase 53E, [RH, Score=988, Expect=0.0]} {Celegans: WBGene00004033, pkc-2, Protein kinase C-like 2, [RH, Score=956, Expect=0.0]} {Smed: dd_Smed_v6_4244_0_2, dd_Smed_v6_4244_0_2, [RH, Score=1076, Expect=0.0]} {RNA1509_11086} {RNA1310_10368.1} {RNA815_2108.1}
18. MligTC455_24519 1035 21.55 Mlig455_026505

Neo: -

Age: Up-Down-Down

Region-enriched R2: 1.364/0.03756

 DNAH10 1.847 - - - 0.895 0.952 - Mlig455_026505 {REF} {Length: 14733} {Pfam: Hydrolytic ATP binding site of dynein motor region [PF12774.9, score=521.9]; Dynein heavy chain, N-terminal region 2 [PF08393.15, score=390.5]; P-loop containing dynein motor region D4 [PF12780.9, score=341.0]; Dynein heavy chain C-terminal domain [PF18199.3, score=306.8]; ATP-binding dynein motor region [PF12781.9, score=282.5]; P-loop containing dynein motor region [PF12775.9, score=264.2]; Microtubule-binding stalk of dynein motor [PF12777.9, score=214.4]; Dynein heavy chain AAA lid domain [PF18198.3, score=174.9]; Dynein heavy chain region D6 P-loop domain [PF03028.17, score=142.3]; AAA domain (dynein-related subfamily) [PF07728.16, score=92.9]; Dynein heavy chain AAA lid domain [PF17852.3, score=81.8]; AAA+ lid domain [PF17857.3, score=63.2]; AAA domain [PF13401.8, score=44.6]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=34.7]; AAA ATPase domain [PF13191.8, score=31.6]; AAA domain [PF13238.8, score=24.7]; MoxR domain in the MoxR-vWA-beta-propeller ternary systems [PF20030.1, score=21.4]; Sigma-54 interaction domain [PF00158.28, score=21.3]} {Human: ENSG00000281935, DNAH10, dynein axonemal heavy chain 10, [RH, Score=4662, Expect=0.0]} {Mouse: ENSMUSG00000038011, Dnah10, dynein, axonemal, heavy chain 10, [Score=4676, Expect=0.0]} {Dmel: FBgn0013813, Dhc98D, Dynein heavy chain at 89D, [RH, Score=3860, Expect=0.0]} {Celegans: WBGene00000962, dhc-1, Dynein heavy chain, cytoplasmic, [Score=1408, Expect=0.0]} {Smed: dd_Smed_v6_5169_0_1, dd_Smed_v6_5169_0_1, [RH, Score=4698, Expect=0.0]} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1310_40.1, RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395} {RNA1509_19877, RNA1509_2715, RNA1509_29080, RNA1509_395, RNA815_20}
19. MligTC455_30192 1664 34.66 Mlig455_026693

Neo: -

Age: -

 FOXRED2 1.817 - - - 0.866 0.951 - Mlig455_026693 {REF} {Length: 18036} {Pfam: Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=147.7]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=45.8]; HI0933-like protein [PF03486.16, score=31.1]; FAD dependent oxidoreductase [PF01266.26, score=26.0]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=25.0]; FAD binding domain [PF01494.21, score=22.8]; L-lysine 6-monooxygenase (NADPH-requiring) [PF13434.8, score=22.5]; Flavin containing amine oxidoreductase [PF01593.26, score=21.9]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=20.1]} {Human: ENSG00000100350, FOXRED2, FAD dependent oxidoreductase domain containing 2, [RH, Score=493, Expect=4e-167]} {Mouse: ENSMUSG00000016552, Foxred2, FAD-dependent oxidoreductase domain containing 2, [RH, Score=498, Expect=3e-169]} {Celegans: WBGene00001479, fmo-4, Flavin-containing monooxygenase, [Score=53.5, Expect=4e-07]} {Smed: dd_Smed_v6_12138_0_1, dd_Smed_v6_12138_0_1, [RH, Score=474, Expect=4e-161]} {RNA1509_13675, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1310_861.1, RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978} {RNA1509_19929, RNA1509_38216, RNA1509_56501, RNA1509_8978, RNA815_570.1}
20. MligTC455_28579 550 11.46 Mlig455_006981

Neo: -

Age: -

 1.792 - - - - 0.838 0.954 Mlig455_006981 {REF} {Length: 627} {NoTransDecoderORF} {RNA1509_39125} {RNA1310_18136} {RNA815_4513}
21. MligTC455_52249 1365 28.44 Mlig455_007872

Neo: -

Age: Down-Down-Up

Region-enriched R2: 1.111/0.04280

 1.782 - - - 0.818 0.964 - Mlig455_007872 {REF} {Length: 2081} {Pfam: Transmembrane protein 237 [PF15383.8, score=91.3]} {Mouse: ENSMUSG00000038079, Tmem237, transmembrane protein 237, [Score=55.1, Expect=1e-07]} {RNA1509_6211} {RNA1310_13658, RNA1509_6211} {RNA1509_6211, RNA815_1318.1}
22. MligTC455_41757 2210 46.04 Mlig455_067601

Neo: -

Age: Down-Down-Up

 1.772 - - - 0.817 - 0.955 Mlig455_067601 {REF} {Length: 2908} {Pfam: Thymosin beta-4 family [PF01290.22, score=118.1]} {Dmel: FBgn0026084, cib, ciboulot, [RH, Score=58.5, Expect=6e-11]} {Celegans: WBGene00006649, tth-1, Thymosin beta, [Score=45.8, Expect=3e-06]} {Smed: dd_Smed_v6_17_0_1, dd_Smed_v6_17_0_1, [Score=73.9, Expect=5e-17]} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1310_19846.1, RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771} {RNA1509_2234, RNA1509_44322, RNA1509_48105, RNA1509_57771, RNA815_7395.2}
23. MligTC455_29651 934 19.46 Mlig455_055194

Neo: Irradiation

Age: -

 SYNE1 1.762 - - - 0.961 0.801 - Mlig455_055194 {REF} {Length: 5428} {Pfam: Spectrin repeat [PF00435.23, score=88.4]} {Human: ENSG00000131018, SYNE1, spectrin repeat containing nuclear envelope protein 1, [RH, Score=370, Expect=1e-106]} {Mouse: ENSMUSG00000096054, Syne1, spectrin repeat containing, nuclear envelope 1, [Score=389, Expect=1e-110]} {Dmel: FBgn0261836, Msp300, Muscle-specific protein 300 kDa, [Score=134, Expect=6e-31]} {Smed: dd_Smed_v6_5365_0_2, dd_Smed_v6_5365_0_2, [RH, Score=162, Expect=5e-40]} {RNA1509_2539} {RNA1310_140.1} {RNA815_913}
24. MligTC455_08856 1473 30.7 Mlig455_041432, Mlig455_061381

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.073/0.04245

 1.746 - - - - 0.964 0.782

Mlig455_041432 {REF} {Length: 1824} {RNA1509_30871, RNA1509_7020} {RNA1310_16329.1, RNA1509_30871, RNA1509_7020} {RNA1509_30871, RNA1509_7020, RNA815_9026}

Mlig455_061381 {REF} {Length: 1431} {RNA1509_30871} {RNA1310_16329.2} {RNA815_9026}
25. MligTC455_21593 425 8.84 Mlig455_013101, Mlig455_013193

Neo: -

Age: Down-Down-Up

 1.728 - - 0.770 - 0.958 -

Mlig455_013101 {REF} {Length: 542} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}

Mlig455_013193 {REF} {Length: 528} {RNA1509_56841} {RNA1310_116243} {RNA815_22112}
26. MligTC455_36702 160 3.34 Mlig455_026963, Mlig455_027049, Mlig455_030735

Neo: -

Age: Up-Down-Up

Region-enriched R4: 4.832/0.01296

 PRR9 0.972 - - - - 0.972 -

Mlig455_026963 {REF} {Length: 3470} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=46.6, Expect=6e-07]} {RNA1310_49920} {RNA815_39169}

Mlig455_027049 {REF} {Length: 4933} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.1, Expect=4e-06]} {RNA1310_58026} {RNA815_17286}

Mlig455_030735 {REF} {Length: 2517} {RNA1310_49920} {RNA815_39169}
27. MligTC455_16167 177 3.69 Mlig455_065707

Neo: -

Age: Down-Down-Up, logFC(26M/2M)=-0.428

Region-enriched R2: 4.313/0.00011

 B3GALT5 0.963 - - - - 0.963 - Mlig455_065707 {REF} {Length: 4598} {Pfam: Galactosyltransferase [PF01762.23, score=160.3]} {Human: ENSG00000183778, B3GALT5, beta-1,3-galactosyltransferase 5, [RH, Score=130, Expect=2e-33]} {Mouse: ENSMUSG00000034780, B3galt1, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1, [Score=115, Expect=4e-28]; ENSMUSG00000074892, B3galt5, UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 5, [Score=111, Expect=9e-27]} {Dmel: FBgn0035558, CG11357, [RH, Score=148, Expect=4e-39]} {Celegans: WBGene00000270, bre-5, Beta-1,3-galactosyltransferase bre-5, [Score=67.0, Expect=5e-12]} {Smed: dd_Smed_v6_12783_0_1, dd_Smed_v6_12783_0_1, [Score=152, Expect=6e-42]} {RNA1509_45540} {RNA1310_2435} {RNA815_25407}
28. MligTC455_23903 1075 22.39 Mlig455_000373

Neo: -

Age: -

 AHNAK 0.961 - - - - - 0.961 Mlig455_000373 {REF} {Length: 14014} {Pfam: Galactoside-binding lectin [PF00337.24, score=110.4]; Family of unknown function (DUF6470) [PF20074.1, score=106.9]; Sporulation protein YunB (Spo_YunB) [PF09560.12, score=19.5]} {Human: ENSG00000124942, AHNAK, AHNAK nucleoprotein, [RH, Score=1415, Expect=0.0]} {Mouse: ENSMUSG00000069833, Ahnak, AHNAK nucleoprotein (desmoyokin), [RH, Score=1400, Expect=0.0]} {Smed: dd_Smed_v6_10749_0_1, dd_Smed_v6_10749_0_1, [RH, Score=82.4, Expect=2e-15]} {RNA1509_4477} {RNA1310_4139.2} {RNA815_13863}
29. MligTC455_24735 1026 21.38 Mlig455_003136

Neo: -

Age: logFC(26M/2M)=-0.296

 VWA3B 0.956 - - - - 0.956 - Mlig455_003136 {REF} {Length: 2787} {Pfam: Domain of unknown function (DUF4537) [PF15057.8, score=231.3]; DNA repair protein Crb2 Tudor domain [PF18115.3, score=42.4]; SGF29 tudor-like domain [PF07039.13, score=39.7]; Jumonji domain-containing protein 2A Tudor domain [PF18104.3, score=33.4]; SPX domain [PF03105.21, score=20.6]} {Human: ENSG00000168658, VWA3B, von Willebrand factor A domain containing 3B, [RH, Score=79.7, Expect=4e-15]} {RNA1509_5206} {RNA1310_5951.1, RNA1509_5206} {RNA1509_5206, RNA815_1760.1}
30. MligTC455_47284 1985 41.36 Mlig455_035332, Mlig455_035375

Neo: -

Age: Down-Up-Up

Region-enriched R2: 2.254/0.00001

 PANK4 0.955 - - - - 0.955 -

Mlig455_035332 {REF} {Length: 1878} {Pfam: Fumble [PF03630.16, score=120.1]} {Human: ENSG00000273494, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]; ENSG00000157881, PANK4, pantothenate kinase 4, [Score=106, Expect=2e-24]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=102, Expect=5e-23]} {Dmel: FBgn0011205, fbl, fumble, [Score=73.6, Expect=3e-14]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=68.2, Expect=2e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=152, Expect=9e-43]} {RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1310_12126.1, RNA1509_12908, RNA1509_25097, RNA1509_42106} {RNA1509_12908, RNA1509_25097, RNA1509_42106, RNA815_8093.2}

Mlig455_035375 {REF} {Length: 1877} {Pfam: Fumble [PF03630.16, score=118.3]} {Human: ENSG00000157881, PANK4, pantothenate kinase 4, [Score=101, Expect=1e-22]; ENSG00000273494, PANK4, pantothenate kinase 4, [Score=101, Expect=9e-23]} {Mouse: ENSMUSG00000029056, Pank4, pantothenate kinase 4, [Score=97.1, Expect=2e-21]} {Dmel: FBgn0011205, fbl, fumble, [Score=71.6, Expect=1e-13]} {Celegans: WBGene00004068, pnk-1, PaNtothenate Kinase, [Score=66.2, Expect=9e-12]} {Smed: dd_Smed_v6_994_0_1, dd_Smed_v6_994_0_1, [Score=148, Expect=5e-41]} {RNA1509_12908} {RNA1310_12126.1} {RNA815_8093.2}
31. MligTC455_35416 312 6.5 Mlig455_025858

Neo: -

Age: Down-Down-Up

Region-enriched R2: 2.218/0.01756

 0.954 - - - - 0.954 - Mlig455_025858 {REF} {Length: 2565} {RNA1509_8462} {RNA1310_23985, RNA1509_8462} {RNA1509_8462, RNA815_9218.1}
32. MligTC455_25995 969 20.19 Mlig455_053997

Neo: -

Age: logFC(26M/2M)=-0.409

 0.953 - - - - 0.953 - Mlig455_053997 {REF} {Length: 2065} {RNA1509_14175} {RNA1310_16956, RNA1509_14175} {RNA1509_14175, RNA815_8462}
33. MligTC455_47287 339 7.06 Mlig455_021785

Neo: -

Age: Down-Up-Up

 NEK11 0.952 - - - - 0.952 - Mlig455_021785 {REF} {Length: 2327} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=194.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=146.2]} {Human: ENSG00000114670, NEK11, NIMA related kinase 11, [Score=315, Expect=1e-99]} {Mouse: ENSMUSG00000035032, Nek11, NIMA (never in mitosis gene a)-related expressed kinase 11, [Score=306, Expect=8e-97]} {Dmel: FBgn0045980, niki, nimA-like kinase, [Score=167, Expect=3e-44]} {Celegans: WBGene00021461, nekl-1, NEK (NEver in mitosis Kinase) Like, [Score=169, Expect=5e-45]} {Smed: dd_Smed_v6_9098_0_1, dd_Smed_v6_9098_0_1, [Score=299, Expect=1e-94]} {RNA1509_21300, RNA1509_4673} {RNA1310_10217.1, RNA1509_21300, RNA1509_4673} {RNA1509_21300, RNA1509_4673, RNA815_15323.1}
34. MligTC455_06092 762 15.88 Mlig455_069915

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.940

 0.951 - - - - 0.951 - Mlig455_069915 {REF} {Length: 3038} {Pfam: Otopetrin [PF03189.15, score=32.6]} {RNA1509_10108} {RNA1310_8141, RNA1509_10108} {RNA1509_10108, RNA815_2847.1}
35. MligTC455_30259 164 3.42 Mlig455_067891

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_067891 {REF} {Length: 4972} {TRANSSPLICED} {RNA1509_27782} {RNA1310_12111} {RNA815_5159.1}
36. MligTC455_28315 110 2.29 Mlig455_030359

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_030359 {REF} {Length: 735} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_71196} {RNA815_23623}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA