TomoSeq data search

Data search

Results for MligTC455_30287

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30287	58	1.21	Mlig455_047054	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.661 Region-enriched R4: 5.589/0.02506	MAP3K6	Mlig455_047054 {REF} {Length: 3219} {Pfam: Protein kinase domain [PF00069.27, score=161.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=119.7]; Ankyrin repeats (3 copies) [PF12796.9, score=70.4]; Ankyrin repeats (many copies) [PF13857.8, score=47.2]; Ankyrin repeats (many copies) [PF13637.8, score=44.2]; Ankyrin repeat [PF13606.8, score=40.0]; Ankyrin repeat [PF00023.32, score=34.7]; Fungal protein kinase [PF17667.3, score=24.3]; Phosphotransferase enzyme family [PF01636.25, score=20.2]} {Human: ENSG00000142733, MAP3K6, mitogen-activated protein kinase kinase kinase 6, [Score=130, Expect=2e-30]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=127, Expect=2e-29]} {Mouse: ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=133, Expect=1e-31]} {Dmel: FBgn0024329, Mekk1, [Score=128, Expect=4e-30]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=113, Expect=1e-25]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_30287

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-1.522	1.592	0.99959	1.00000
RegionR2	-2.209	1.592	0.95851	1.00000
RegionR3	-2.525	1.592	1.00000	1.00000
RegionR4	5.589	1.592	0.00310	0.02506
RegionR5	2.546	1.592	0.05369	0.19729
RegionR6	1.346	1.592	0.34197	0.92878
RegionR7	-2.385	1.592	0.99964	1.00000
RegionR8	-0.839	1.592	0.99962	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-1.139	1.592	1.00000	1.00000
RegenerationR2	1.677	1.592	0.22141	0.66877
RegenerationR3	2.022	1.592	0.24763	0.68172
RegenerationR4	-0.541	1.592	0.56947	0.90112
RegenerationR5	-0.203	1.592	0.71294	0.95690
RegenerationR6	-1.264	1.592	0.26595	0.61586
RegenerationBL	0.938	1.592	0.59684	0.94494
RegenerationTP	-2.448	1.592	0.99981	1.00000

Genes with expression patterns similar to MligTC455_30287

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30287	58	1.21	Mlig455_047054	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.661 Region-enriched R4: 5.589/0.02506	MAP3K6	4	-	-	1.000	1.000	1.000	1.000	Mlig455_047054 {REF} {Length: 3219} {Pfam: Protein kinase domain [PF00069.27, score=161.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=119.7]; Ankyrin repeats (3 copies) [PF12796.9, score=70.4]; Ankyrin repeats (many copies) [PF13857.8, score=47.2]; Ankyrin repeats (many copies) [PF13637.8, score=44.2]; Ankyrin repeat [PF13606.8, score=40.0]; Ankyrin repeat [PF00023.32, score=34.7]; Fungal protein kinase [PF17667.3, score=24.3]; Phosphotransferase enzyme family [PF01636.25, score=20.2]} {Human: ENSG00000142733, MAP3K6, mitogen-activated protein kinase kinase kinase 6, [Score=130, Expect=2e-30]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=127, Expect=2e-29]} {Mouse: ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=133, Expect=1e-31]} {Dmel: FBgn0024329, Mekk1, [Score=128, Expect=4e-30]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=113, Expect=1e-25]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}
2.	MligTC455_28070	31	0.65	Mlig455_003961	Neo: - Age: Up-Down-Down		1.723	-	-	0.752	-	0.971	-	Mlig455_003961 {REF} {Length: 2138} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_10847.1} {RNA815_23623}
3.	MligTC455_25224	37	0.76	Mlig455_008664, Mlig455_041970	Neo: - Age: Up-Down-Down		0.983	-	-	-	-	0.983	-	Mlig455_008664 {REF} {Length: 5275} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=23.8]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.2} Mlig455_041970 {REF} {Length: 4204} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=23.8]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7136.1}
4.	MligTC455_38290	222	4.63	Mlig455_045005	Neo: - Age: -	SOAT1	0.981	-	-	0.981	-	-	-	Mlig455_045005 {REF} {Length: 3948} {TRANSSPLICED} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=115.6]} {Human: ENSG00000057252, SOAT1, sterol O-acyltransferase 1, [RH, Score=353, Expect=5e-116]} {Mouse: ENSMUSG00000026600, Soat1, sterol O-acyltransferase 1, [RH, Score=359, Expect=2e-118]} {Dmel: FBgn0037612, CG8112, [RH, Score=232, Expect=1e-69]} {Celegans: WBGene00007174, mboa-1, O-acyltransferase, [Score=224, Expect=2e-67]} {Smed: dd_Smed_v6_4278_0_1, dd_Smed_v6_4278_0_1, [RH, Score=390, Expect=5e-131]} {RNA1509_21845} {RNA1310_19155, RNA1509_21845} {RNA1509_21845, RNA815_15179}
5.	MligTC455_51661	98	2.04	Mlig455_012017, Mlig455_012480	Neo: - Age: logFC(26M/2M)=-0.393	CHRM3	0.971	-	-	-	-	-	0.971	Mlig455_012017 {REF} {Length: 2227} {Pfam: 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=82.5]} {Human: ENSG00000133019, CHRM3, cholinergic receptor muscarinic 3, [Score=64.3, Expect=3e-10]; ENSG00000180720, CHRM4, cholinergic receptor muscarinic 4, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000046159, Chrm3, cholinergic receptor, muscarinic 3, cardiac, [Score=64.3, Expect=2e-10]; ENSMUSG00000074939, Chrm5, cholinergic receptor, muscarinic 5, [Score=63.2, Expect=4e-10]} {Dmel: FBgn0000037, mAChR-A, muscarinic Acetylcholine Receptor, A-type, [Score=70.5, Expect=2e-12]} {Celegans: WBGene00004780, ser-7, SERotonin/octopamine receptor family, [Score=53.5, Expect=2e-07]} {Smed: dd_Smed_v6_20043_0_1, dd_Smed_v6_20043_0_1, [Score=67.4, Expect=8e-12]} {RNA1310_38511.2} {RNA815_15813.1} Mlig455_012480 {REF} {Length: 1556} {RNA1310_38511.1} {RNA815_15813.1}
6.	MligTC455_12376	32	0.68	Mlig455_062734	Neo: - Age: -		0.968	-	-	-	-	0.968	-	Mlig455_062734 {REF} {Length: 61} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_78374}
7.	MligTC455_43611	93	1.94	Mlig455_047359, Mlig455_047360	Neo: - Age: -		0.965	-	-	-	-	-	0.965	Mlig455_047359 {REF} {Length: 707} {NoTransDecoderORF} {RNA1310_133647} Mlig455_047360 {REF} {Length: 911} {NoTransDecoderORF} {RNA1310_133647}
8.	MligTC455_34138	10	0.21	Mlig455_035216	Neo: - Age: -		0.963	-	-	-	-	0.963	-	Mlig455_035216 {REF} {Length: 873} {NoTransDecoderORF}
9.	MligTC455_00649	13	0.28	Mlig455_014001	Neo: - Age: -		0.961	-	-	-	-	0.961	-	Mlig455_014001 {REF} {Length: 525} {NoTransDecoderORF} {RNA1310_40460}
10.	MligTC455_06089	26	0.54	Mlig455_037648	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.770		0.96	-	-	-	-	0.960	-	Mlig455_037648 {REF} {Length: 2465} {Pfam: Otopetrin [PF03189.15, score=27.4]} {RNA1509_10108} {RNA1310_12138.2} {RNA815_2847.1}
11.	MligTC455_03999	86	1.8	Mlig455_002026, Mlig455_002117, Mlig455_002223	Neo: Germline Age: -		0.958	-	-	-	-	0.958	-	Mlig455_002026 {REF} {Length: 461} {RNA1310_65306} Mlig455_002117 {REF} {Length: 461} {RNA1310_65306} Mlig455_002223 {REF} {Length: 925} {RNA1310_65306} {RNA815_64331}
12.	MligTC455_30051	18	0.38	Mlig455_010151	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_010151 {REF} {Length: 2317} {Pfam: Integrase zinc binding domain [PF17921.3, score=74.2]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=52.6]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=28.9]; H2C2 zinc finger [PF09337.12, score=27.8]; Integrase core domain [PF00665.28, score=27.0]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=119, Expect=4e-28]} {RNA1509_14295} {RNA1310_1396.1} {RNA815_549.1}
13.	MligTC455_29491	238	4.96	Mlig455_069524	Neo: Irradiation Age: Up-Up-Down, logFC(26M/2M)=0.351		0.956	-	-	-	-	0.956	-	Mlig455_069524 {REF} {Length: 3130} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.3]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1310_12293.2, RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1509_17162, RNA1509_41197, RNA1509_54683, RNA815_9107.2}
14.	MligTC455_33612	217	4.51	Mlig455_017362	Neo: - Age: logFC(26M/2M)=0.818	ASAH2	0.956	-	-	-	-	-	0.956	Mlig455_017362 {REF} {Length: 6769} {Pfam: Neutral/alkaline non-lysosomal ceramidase, N-terminal [PF04734.15, score=704.1]; Neutral/alkaline non-lysosomal ceramidase, C-terminal [PF17048.7, score=119.9]; Major Facilitator Superfamily [PF07690.18, score=92.8]} {Human: ENSG00000188611, ASAH2, N-acylsphingosine amidohydrolase 2, [RH, Score=602, Expect=0.0]} {Mouse: ENSMUSG00000024887, Asah2, N-acylsphingosine amidohydrolase 2, [RH, Score=594, Expect=0.0]} {Dmel: FBgn0039774, CDase, Ceramidase, [RH, Score=568, Expect=0.0]} {Celegans: WBGene00011719, T11G6.4, [Score=122, Expect=7e-29]} {Smed: dd_Smed_v6_1726_0_1, dd_Smed_v6_1726_0_1, [RH, Score=645, Expect=0.0]} {RNA1509_25115} {RNA1310_8395.1} {RNA815_2759}
15.	MligTC455_49447	105	2.2	Mlig455_027882	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.491	PRKCZ	0.955	-	-	-	-	0.955	-	Mlig455_027882 {REF} {Length: 2617} {Pfam: Protein kinase domain [PF00069.27, score=120.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=83.0]; Kinase-like [PF14531.8, score=25.0]} {Human: ENSG00000067606, PRKCZ, protein kinase C zeta, [Score=89.0, Expect=3e-18]; ENSG00000065675, PRKCQ, protein kinase C theta, [Score=88.2, Expect=5e-18]; ENSG00000163558, PRKCI, protein kinase C iota, [Score=88.2, Expect=4e-18]; ENSG00000027075, PRKCH, protein kinase C eta, [Score=87.8, Expect=6e-18]; ENSG00000108443, RPS6KB1, ribosomal protein S6 kinase B1, [Score=87.8, Expect=5e-18]; ENSG00000117676, RPS6KA1, ribosomal protein S6 kinase A1, [Score=86.3, Expect=2e-17]; ENSG00000281877, RPS6KA1, ribosomal protein S6 kinase A1, [Score=86.3, Expect=2e-17]; ENSG00000171132, PRKCE, protein kinase C epsilon, [Score=85.9, Expect=4e-17]} {Mouse: ENSMUSG00000021108, Prkch, protein kinase C, eta, [Score=88.6, Expect=3e-18]; ENSMUSG00000029053, Prkcz, protein kinase C, zeta, [Score=88.2, Expect=3e-18]; ENSMUSG00000037643, Prkci, protein kinase C, iota, [Score=87.8, Expect=4e-18]; ENSMUSG00000020516, Rps6kb1, ribosomal protein S6 kinase, polypeptide 1, [Score=87.4, Expect=5e-18]; ENSMUSG00000025665, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=85.9, Expect=3e-17]; ENSMUSG00000116203, Rps6ka6, ribosomal protein S6 kinase polypeptide 6, [Score=85.9, Expect=3e-17]; ENSMUSG00000003644, Rps6ka1, ribosomal protein S6 kinase polypeptide 1, [Score=85.5, Expect=3e-17]; ENSMUSG00000045038, Prkce, protein kinase C, epsilon, [Score=85.1, Expect=5e-17]; ENSMUSG00000026778, Prkcq, protein kinase C, theta, [Score=84.3, Expect=7e-17]; ENSMUSG00000019699, Akt3, thymoma viral proto-oncogene 3, [Score=84.3, Expect=5e-17]} {Dmel: FBgn0003093, Pkc98E, Protein C kinase 98E, [Score=87.0, Expect=6e-18]} {Celegans: WBGene00004032, pkc-1, Protein kinase C-like 1B, [Score=85.1, Expect=2e-17]} {Smed: dd_Smed_v6_8010_0_1, dd_Smed_v6_8010_0_1, [Score=88.6, Expect=1e-18]} {RNA1509_20079, RNA1509_52166} {RNA1310_18713, RNA1509_20079, RNA1509_52166} {RNA1509_20079, RNA1509_52166, RNA815_7871}
16.	MligTC455_15536	41	0.86	Mlig455_030649	Neo: - Age: -		0.953	-	-	-	-	0.953	-	Mlig455_030649 {REF} {Length: 1146} {RNA1310_33769.1} {RNA815_16068}
17.	MligTC455_06426	14	0.3	Mlig455_045703	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_045703 {REF} {Length: 756} {NoTransDecoderORF} {RNA1310_88574} {RNA815_52979}
18.	MligTC455_08944	160	3.34	Mlig455_050947	Neo: - Age: Down-Up-Down, logFC(26M/2M)=-0.619		0.951	-	-	-	-	0.951	-	Mlig455_050947 {REF} {Length: 1135} {RNA1310_13460.1} {RNA815_53760}
19.	MligTC455_27911	45	0.94	Mlig455_049225, Mlig455_049228	Neo: - Age: Up-Down-Up, logFC(26M/2M)=0.777	FAT4	0.951	-	-	-	-	0.951	-	Mlig455_049225 {REF} {Length: 12873} {Pfam: Cadherin domain [PF00028.19, score=824.7]; Cadherin prodomain like [PF08758.13, score=35.4]; Cadherin-like [PF16184.7, score=28.6]; Peptidase propeptide and YPEB domain [PF03413.21, score=22.0]; Bacterial cadherin-like domain [PF17803.3, score=19.8]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=310, Expect=1e-83]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=368, Expect=4e-101]} {Dmel: FBgn0001075, ft, fat, [Score=283, Expect=2e-75]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=176, Expect=4e-43]} {Smed: dd_Smed_v6_12895_0_1, dd_Smed_v6_12895_0_1, [Score=155, Expect=2e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1} Mlig455_049228 {REF} {Length: 24107} {Pfam: Cadherin domain [PF00028.19, score=1466.0]; RET Cadherin like domain 1 [PF17756.3, score=58.7]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=48.5]; Cadherin-like [PF16184.7, score=34.1]; Cadherin prodomain like [PF08758.13, score=29.5]} {Human: ENSG00000196159, FAT4, FAT atypical cadherin 4, [Score=396, Expect=8e-109]} {Mouse: ENSMUSG00000046743, Fat4, FAT atypical cadherin 4, [Score=389, Expect=5e-107]} {Dmel: FBgn0001075, ft, fat, [Score=334, Expect=1e-90]} {Celegans: WBGene00019994, cdh-1, CaDHerin family, [Score=183, Expect=5e-45]} {Smed: dd_Smed_v6_15356_0_1, dd_Smed_v6_15356_0_1, [Score=158, Expect=1e-37]} {RNA1509_562} {RNA1310_5} {RNA815_1}
20.	MligTC455_47843	349	7.27	Mlig455_040270, Mlig455_040278	Neo: - Age: -	RPGRIP1L	0.951	-	-	-	-	0.951	-	Mlig455_040270 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.6]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=85.5, Expect=3e-16]} {Celegans: WBGene00015646, mlt-10, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=90.1, Expect=4e-18]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280} Mlig455_040278 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=129, Expect=8e-30]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=126, Expect=5e-29]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=150, Expect=1e-36]} {RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1310_4375.1, RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1509_12953, RNA1509_16323, RNA1509_56954, RNA815_1280}
21.	MligTC455_50253	44	0.92	Mlig455_031495	Neo: - Age: -	GABRB2	0.951	-	-	-	-	0.951	-	Mlig455_031495 {REF} {Length: 2129} {Pfam: Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=58.3]} {Human: ENSG00000145864, GABRB2, gamma-aminobutyric acid type A receptor beta2 subunit, [Score=71.2, Expect=6e-14]} {Mouse: ENSMUSG00000007653, Gabrb2, gamma-aminobutyric acid (GABA) A receptor, subunit beta 2, [Score=67.8, Expect=1e-12]; ENSMUSG00000029212, Gabrb1, gamma-aminobutyric acid (GABA) A receptor, subunit beta 1, [Score=67.4, Expect=1e-12]} {Dmel: FBgn0024963, GluClalpha, [Score=54.3, Expect=3e-08]} {Celegans: WBGene00001594, glc-4, Glutamate-gated ChLoride channel, [Score=66.6, Expect=2e-12]} {Smed: dd_Smed_v6_15331_0_1, dd_Smed_v6_15331_0_1, [Score=70.1, Expect=9e-14]} {RNA1310_46931} {RNA815_25428}
22.	MligTC455_47575	203	4.23	Mlig455_068827	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-1.457	MAN1C1	0.95	-	-	-	-	0.950	-	Mlig455_068827 {REF} {Length: 3468} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=378.5]} {Human: ENSG00000117643, MAN1C1, mannosidase alpha class 1C member 1, [Score=268, Expect=7e-82]; ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=268, Expect=2e-81]} {Mouse: ENSMUSG00000037306, Man1c1, mannosidase, alpha, class 1C, member 1, [Score=267, Expect=2e-81]; ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=267, Expect=2e-81]; ENSMUSG00000003746, Man1a, mannosidase 1, alpha, [Score=264, Expect=6e-80]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=268, Expect=1e-81]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=250, Expect=1e-75]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=267, Expect=3e-82]} {RNA1509_48511, RNA1509_9530} {RNA1310_9474.1, RNA1509_48511, RNA1509_9530} {RNA1509_48511, RNA1509_9530, RNA815_6962}