M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_47843

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_47843 349 7.27 Mlig455_040270, Mlig455_040278

Neo: -

Age: -

 RPGRIP1L

Mlig455_040270 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.6]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=85.5, Expect=3e-16]} {Celegans: WBGene00015646, mlt-10, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=90.1, Expect=4e-18]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280}

Mlig455_040278 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=129, Expect=8e-30]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=126, Expect=5e-29]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=150, Expect=1e-36]} {RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1310_4375.1, RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1509_12953, RNA1509_16323, RNA1509_56954, RNA815_1280}

Cumulative graph for MligTC455_47843

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -2.022 3.285 0.16338 0.78636
RegionR2 1.008 3.285 0.09513 0.37831
RegionR3 0.139 3.285 0.77533 1.00000
RegionR4 0.069 3.285 0.89790 1.00000
RegionR5 0.447 3.285 0.32861 0.67298
RegionR6 0.482 3.285 0.34868 0.93420
RegionR7 -0.087 3.285 0.88548 1.00000
RegionR8 -0.035 3.285 0.95537 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -5.844 3.285 0.25978 0.96822
RegenerationR2 0.762 3.285 0.09619 0.49233
RegenerationR3 0.703 3.285 0.22513 0.66044
RegenerationR4 1.072 3.285 0.07032 0.42153
RegenerationR5 -0.349 3.285 0.51325 0.86615
RegenerationR6 -0.612 3.285 0.32778 0.67414
RegenerationBL -0.825 3.285 0.28145 0.64245
RegenerationTP -0.533 3.285 0.49115 0.89638


Genes with expression patterns similar to MligTC455_47843

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_47843 349 7.27 Mlig455_040270, Mlig455_040278

Neo: -

Age: -

 RPGRIP1L 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_040270 {REF} {Length: 4583} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.6]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=86.7, Expect=2e-16]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=85.5, Expect=3e-16]} {Celegans: WBGene00015646, mlt-10, [Score=53.1, Expect=1e-06]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=90.1, Expect=4e-18]} {RNA1509_12953} {RNA1310_4375.1} {RNA815_1280}

Mlig455_040278 {REF} {Length: 4279} {TRANSSPLICED} {Pfam: Retinitis pigmentosa G-protein regulator interacting C-terminal [PF18111.3, score=54.9]} {Human: ENSG00000103494, RPGRIP1L, RPGRIP1 like, [Score=129, Expect=8e-30]} {Mouse: ENSMUSG00000033282, Rpgrip1l, Rpgrip1-like, [Score=126, Expect=5e-29]} {Smed: dd_Smed_v6_11425_0_1, dd_Smed_v6_11425_0_1, [Score=150, Expect=1e-36]} {RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1310_4375.1, RNA1509_12953, RNA1509_16323, RNA1509_56954} {RNA1509_12953, RNA1509_16323, RNA1509_56954, RNA815_1280}
2. MligTC455_39145 860 17.92 Mlig455_045710

Neo: -

Age: Down-Up-Down

Region-enriched R2: 1.035/0.04635

 2.668 - - - 0.856 0.954 0.858 Mlig455_045710 {REF} {Length: 2657} {Pfam: Family of unknown function (DUF5580) [PF17743.3, score=80.4]} {Smed: dd_Smed_v6_9326_0_1, dd_Smed_v6_9326_0_1, [RH, Score=180, Expect=1e-49]} {RNA1509_11160, RNA1509_32698} {RNA1310_8387, RNA1509_11160, RNA1509_32698} {RNA1509_11160, RNA1509_32698, RNA815_15696.1}
3. MligTC455_42172 67 1.39 Mlig455_066943

Neo: -

Age: Down-Up-Up

 2.634 - - 0.791 - 0.955 0.888 Mlig455_066943 {REF} {Length: 2101} {Pfam: Innexin [PF00876.20, score=94.4]} {Celegans: WBGene00002133, inx-11, Innexin-11, [Score=87.8, Expect=9e-20]} {Smed: dd_Smed_v6_11501_0_1, dd_Smed_v6_11501_0_1, [Score=112, Expect=1e-28]} {RNA1509_10527} {RNA1310_14408} {RNA815_844.2}
4. MligTC455_34852 681 14.19 Mlig455_040753, Mlig455_066786

Neo: -

Age: logFC(26M/2M)=-0.406

 CAPN3, CAPN9 2.407 0.720 - 0.729 - 0.958 -

Mlig455_040753 {REF} {Length: 2907} {Pfam: Calpain family cysteine protease [PF00648.23, score=389.3]; Calpain large subunit, domain III [PF01067.24, score=132.2]; EF hand [PF00036.34, score=31.5]; EF-hand domain pair [PF13833.8, score=24.3]; EF-hand domain [PF13405.8, score=23.5]} {Human: ENSG00000135773, CAPN9, calpain 9, [Score=541, Expect=0.0]; ENSG00000092529, CAPN3, calpain 3, [Score=540, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=534, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [Score=525, Expect=1e-177]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=566, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=436, Expect=8e-143]} {Smed: dd_Smed_v6_1752_0_4, dd_Smed_v6_1752_0_4, [Score=724, Expect=0.0]} {RNA1509_45636} {RNA1310_9182} {RNA815_3486}

Mlig455_066786 {REF} {Length: 4477} {Pfam: Calpain family cysteine protease [PF00648.23, score=389.2]; Calpain large subunit, domain III [PF01067.24, score=132.2]; EF hand [PF00036.34, score=32.0]; EF-hand domain pair [PF13833.8, score=23.4]; EF-hand domain [PF13405.8, score=23.2]; EF hand [PF13202.8, score=18.8]} {Human: ENSG00000092529, CAPN3, calpain 3, [Score=542, Expect=0.0]; ENSG00000135773, CAPN9, calpain 9, [Score=541, Expect=0.0]} {Mouse: ENSMUSG00000079110, Capn3, calpain 3, [Score=536, Expect=0.0]; ENSMUSG00000031981, Capn9, calpain 9, [Score=526, Expect=5e-178]} {Dmel: FBgn0025866, CalpB, Calpain-B, [Score=565, Expect=0.0]} {Celegans: WBGene00000542, clp-1, Calpain clp-1, [Score=436, Expect=2e-142]} {Smed: dd_Smed_v6_1752_0_2, dd_Smed_v6_1752_0_2, [Score=724, Expect=0.0]} {RNA1509_45636} {RNA1310_9182} {RNA815_3486}
5. MligTC455_33631 517 10.76 Mlig455_049914

Neo: -

Age: -

 2.378 - - 0.711 0.702 0.965 - Mlig455_049914 {REF} {Length: 852} {NoTransDecoderORF} {RNA1509_55678} {RNA1310_47811.1} {RNA815_24394.1}
6. MligTC455_27608 262 5.45 Mlig455_031163

Neo: -

Age: Up-Down-Down

 ITPR1 1.865 - - - - 0.952 0.913 Mlig455_031163 {REF} {Length: 9294} {Pfam: RIH domain [PF01365.23, score=106.4]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=82.5]; RyR and IP3R Homology associated [PF08454.13, score=71.4]; MIR domain [PF02815.21, score=49.4]; Ion transport protein [PF00520.33, score=29.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=231, Expect=1e-59]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=227, Expect=2e-58]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=236, Expect=2e-61]; ENSMUSG00000030102, Itpr1, inositol 1,4,5-trisphosphate receptor 1, [Score=226, Expect=1e-58]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=214, Expect=5e-55]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=181, Expect=8e-45]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=1880, Expect=0.0]} {RNA1509_17046} {RNA1310_1857, RNA1509_17046} {RNA1509_17046, RNA815_770}
7. MligTC455_31744 756 15.76 Mlig455_063640, Mlig455_063642, Mlig455_063643, Mlig455_063644

Neo: -

Age: -

Region-enriched R4: 1.348/0.02100

 1.825 - - 0.850 - 0.975 -

Mlig455_063640 {REF} {Length: 789} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [Score=53.1, Expect=9e-09]} {RNA1509_42493} {RNA1310_2930} {RNA815_5886.1}

Mlig455_063642 {REF} {Length: 3154} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=57.0]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=21.8]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=148, Expect=4e-41]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}

Mlig455_063643 {REF} {Length: 2392} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.7]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=19.7]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=131, Expect=3e-35]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}

Mlig455_063644 {REF} {Length: 2767} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=56.9]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=20.6]} {Smed: dd_Smed_v6_9783_0_1, dd_Smed_v6_9783_0_1, [RH, Score=149, Expect=2e-41]} {RNA1509_48664} {RNA1310_2930} {RNA815_6273}
8. MligTC455_45980 1485 30.93 Mlig455_048042

Neo: -

Age: Down-Up-Down

 CYP2J2 1.813 - - - 0.970 0.843 - Mlig455_048042 {REF} {Length: 2693} {Pfam: Cytochrome P450 [PF00067.24, score=306.1]} {Human: ENSG00000134716, CYP2J2, cytochrome P450 family 2 subfamily J member 2, [Score=225, Expect=5e-67]; ENSG00000155016, CYP2U1, cytochrome P450 family 2 subfamily U member 1, [Score=223, Expect=7e-66]; ENSG00000197838, CYP2A13, cytochrome P450 family 2 subfamily A member 13, [Score=215, Expect=3e-63]; ENSG00000138115, CYP2C8, cytochrome P450 family 2 subfamily C member 8, [Score=214, Expect=6e-63]} {Mouse: ENSMUSG00000052914, Cyp2j6, cytochrome P450, family 2, subfamily j, polypeptide 6, [Score=233, Expect=5e-70]; ENSMUSG00000081225, Cyp2j12, cytochrome P450, family 2, subfamily j, polypeptide 12, [Score=231, Expect=2e-69]; ENSMUSG00000052520, Cyp2j5, cytochrome P450, family 2, subfamily j, polypeptide 5, [Score=228, Expect=2e-68]; ENSMUSG00000066704, Cyp2b19, cytochrome P450, family 2, subfamily b, polypeptide 19, [Score=226, Expect=1e-67]} {Dmel: FBgn0010383, Cyp18a1, Cytochrome P450-18a1, [Score=230, Expect=8e-69]} {Celegans: WBGene00018413, cyp-33C4, CYtochrome P450 family, [Score=233, Expect=2e-70]} {Smed: dd_Smed_v6_8600_0_1, dd_Smed_v6_8600_0_1, [Score=266, Expect=4e-83]} {RNA1509_45458, RNA1509_8101} {RNA1310_14418, RNA1509_45458, RNA1509_8101} {RNA1509_45458, RNA1509_8101, RNA815_4157.2}
9. MligTC455_33120 6187 128.89 Mlig455_017181, Mlig455_048149

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.363

 NME5 1.769 - - 0.812 0.957 - -

Mlig455_017181 {REF} {Length: 1436} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=145.9]; Dpy-30 motif [PF05186.15, score=57.3]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=293, Expect=1e-101]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=115, Expect=1e-32]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.3, Expect=1e-18]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=286, Expect=3e-99]} {RNA1509_23903, RNA1509_35434, RNA1509_38470, RNA1509_46917, RNA1509_49050, RNA1509_56836, RNA1509_6936} {RNA1310_24996.1, RNA1509_23903, RNA1509_35434, RNA1509_38470, RNA1509_46917, RNA1509_49050, RNA1509_56836, RNA1509_6936} {RNA1509_23903, RNA1509_35434, RNA1509_38470, RNA1509_46917, RNA1509_49050, RNA1509_56836, RNA1509_6936, RNA815_10674}

Mlig455_048149 {REF} {Length: 1386} {Pfam: Nucleoside diphosphate kinase [PF00334.21, score=145.9]; Dpy-30 motif [PF05186.15, score=57.3]} {Human: ENSG00000112981, NME5, NME/NM23 family member 5, [RH, Score=293, Expect=1e-101]} {Mouse: ENSMUSG00000035984, Nme5, NME/NM23 family member 5, [RH, Score=280, Expect=3e-96]} {Dmel: FBgn0030573, nmdyn-D6, [RH, Score=115, Expect=1e-32]} {Celegans: WBGene00009119, ndk-1, Nucleoside diphosphate kinase, [Score=79.3, Expect=1e-18]} {Smed: dd_Smed_v6_3890_0_1, dd_Smed_v6_3890_0_1, [RH, Score=286, Expect=3e-99]} {RNA1509_23903, RNA1509_42346} {RNA1310_24996.1, RNA1509_42346} {RNA1509_42346, RNA815_10674}
10. MligTC455_19624 1716 35.75 Mlig455_040484, Mlig455_040490, Mlig455_040497

Neo: -

Age: Down-Up-Down

Regeneration-downregulated BL: -2.704

Regeneration-depleted BL: -2.704

 1.747 - - - 0.787 0.960 -

Mlig455_040484 {REF} {Length: 2839} {RNA1509_22148} {RNA1310_15057} {RNA815_15030}

Mlig455_040490 {REF} {Length: 2905} {RNA1509_22148} {RNA1310_15057} {RNA815_15030}

Mlig455_040497 {REF} {Length: 2610} {RNA1509_22148, RNA1509_29906} {RNA1310_15057, RNA1509_22148, RNA1509_29906} {RNA1509_22148, RNA1509_29906, RNA815_15030}
11. MligTC455_18716 330 6.88 Mlig455_013385

Neo: -

Age: Down-Up-Down

Regeneration-downregulated R6: -2.502

Regeneration-depleted R6: -2.502

 PLSCR1 1.738 - - - 0.957 0.781 - Mlig455_013385 {REF} {Length: 1566} {Pfam: Scramblase [PF03803.17, score=52.4]} {Human: ENSG00000188313, PLSCR1, phospholipid scramblase 1, [Score=75.9, Expect=3e-17]} {Mouse: ENSMUSG00000032372, Plscr2, phospholipid scramblase 2, [Score=66.2, Expect=1e-13]; ENSMUSG00000032369, Plscr1, phospholipid scramblase 1, [Score=63.5, Expect=1e-12]} {Dmel: FBgn0035390, scramb2, scramblase 2, [Score=79.3, Expect=7e-19]} {Celegans: WBGene00014200, scrm-2, Phospholipid scramblase, [Score=61.6, Expect=2e-12]} {Smed: dd_Smed_v6_16813_0_1, dd_Smed_v6_16813_0_1, [Score=74.3, Expect=6e-17]} {RNA1509_43064} {RNA1310_69967, RNA1509_43064} {RNA1509_43064, RNA815_32042}
12. MligTC455_54125 957 19.94 Mlig455_000017

Neo: -

Age: Down-Up-Up

Region-enriched R2: 1.528/0.00489

 SPEF1 1.732 - - - 0.769 0.963 - Mlig455_000017 {REF} {Length: 1279} {TRANSSPLICED} {Pfam: CH-like domain in sperm protein [PF06294.13, score=114.7]; CAMSAP CH domain [PF11971.10, score=53.6]} {Human: ENSG00000101222, SPEF1, sperm flagellar 1, [RH, Score=172, Expect=1e-52]} {Mouse: ENSMUSG00000027329, Spef1, sperm flagellar 1, [RH, Score=180, Expect=3e-56]} {Dmel: FBgn0030722, CG12395, [Score=65.5, Expect=2e-12]} {Smed: dd_Smed_v6_5648_0_1, dd_Smed_v6_5648_0_1, [RH, Score=272, Expect=5e-93]} {RNA1509_17511, RNA1509_37707, RNA1509_9365} {RNA1310_25346.1, RNA1509_17511, RNA1509_37707, RNA1509_9365} {RNA1509_17511, RNA1509_37707, RNA1509_9365, RNA815_11607}
13. MligTC455_33364 348 7.24 Mlig455_009410, Mlig455_016109, Mlig455_026502, Mlig455_027903, Mlig455_036913, Mlig455_066713, Mlig455_068644, Mlig455_070501

Neo: -

Age: logFC(26M/2M)=-0.641

 NYNRIN 1.726 - - - - 0.955 0.771

Mlig455_009410 {REF} {Length: 6826} {TRANSSPLICED} {Pfam: Innexin [PF00876.20, score=304.8]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=92.4, Expect=4e-20]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=209, Expect=1e-62]} {Smed: dd_Smed_v6_10766_0_1, dd_Smed_v6_10766_0_1, [Score=301, Expect=1e-97]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_016109 {REF} {Length: 3482} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.5]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.8]; Integrase zinc binding domain [PF17921.3, score=79.0]; Integrase core domain [PF00665.28, score=55.7]; Aspartyl protease [PF13650.8, score=21.8]; gag-polyprotein putative aspartyl protease [PF13975.8, score=21.3]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=124, Expect=7e-28]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=124, Expect=4e-28]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=425, Expect=7e-131]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502}

Mlig455_026502 {REF} {Length: 698} {Pfam: Zinc knuckle [PF00098.25, score=27.8]} {RNA1509_38652} {RNA1310_25149.1} {RNA815_13280}

Mlig455_027903 {REF} {Length: 3748} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.1]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=84.7]; Integrase zinc binding domain [PF17921.3, score=79.0]; Integrase core domain [PF00665.28, score=51.2]; Aspartyl protease [PF13650.8, score=21.9]; gag-polyprotein putative aspartyl protease [PF13975.8, score=21.3]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=121, Expect=5e-27]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=122, Expect=1e-27]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=432, Expect=8e-134]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_036913 {REF} {Length: 639} {RNA1509_48973} {RNA1310_39833} {RNA815_36286}

Mlig455_066713 {REF} {Length: 2873} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=122.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=122.1]; Integrase zinc binding domain [PF17921.3, score=77.1]; Integrase core domain [PF00665.28, score=53.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [Score=117, Expect=3e-26]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [Score=117, Expect=4e-26]} {Smed: dd_Smed_v6_6563_0_1, dd_Smed_v6_6563_0_1, [Score=237, Expect=1e-65]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_068644 {REF} {Length: 2339} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=124.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=122.2]; Integrase zinc binding domain [PF17921.3, score=79.7]; Integrase core domain [PF00665.28, score=49.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=47.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=130, Expect=4e-30]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=125, Expect=6e-29]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=313, Expect=5e-93]} {RNA1509_38652} {RNA1310_6256} {RNA815_10502}

Mlig455_070501 {REF} {Length: 2339} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=123.7]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=121.2]; Integrase zinc binding domain [PF17921.3, score=76.5]; Integrase core domain [PF00665.28, score=54.6]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=47.6]} {Human: ENSG00000205978, NYNRIN, NYN domain and retroviral integrase containing, [RH, Score=124, Expect=2e-28]} {Mouse: ENSMUSG00000075592, Nynrin, NYN domain and retroviral integrase containing, [RH, Score=125, Expect=1e-28]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=322, Expect=2e-96]} {RNA1509_26990} {RNA1310_6256} {RNA815_10502}
14. MligTC455_17149 83 1.73 Mlig455_042126

Neo: -

Age: -

 1.725 - - 0.773 - 0.952 - Mlig455_042126 {REF} {Length: 1645} {RNA1509_55690} {RNA1310_69830} {RNA815_28343}
15. MligTC455_08944 160 3.34 Mlig455_050947

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.619

 1.72 - - - 0.758 0.962 - Mlig455_050947 {REF} {Length: 1135} {RNA1310_13460.1} {RNA815_53760}
16. MligTC455_52294 214 4.45 Mlig455_041551, Mlig455_053113

Neo: -

Age: Down-Up-Down

 UBXN11 1.714 - - - 0.958 - 0.756

Mlig455_041551 {REF} {Length: 2395} {TRANSSPLICED} {Pfam: SEP domain [PF08059.15, score=57.5]} {Human: ENSG00000158062, UBXN11, UBX domain protein 11, [Score=171, Expect=1e-46]} {Mouse: ENSMUSG00000012126, Ubxn11, UBX domain protein 11, [Score=163, Expect=3e-44]} {Smed: dd_Smed_v6_14940_0_1, dd_Smed_v6_14940_0_1, [Score=184, Expect=8e-52]} {RNA1509_36469} {RNA1310_9386.1} {RNA815_3103}

Mlig455_053113 {REF} {Length: 2423} {TRANSSPLICED} {Pfam: SEP domain [PF08059.15, score=57.2]} {Human: ENSG00000158062, UBXN11, UBX domain protein 11, [RH, Score=176, Expect=1e-48]} {Mouse: ENSMUSG00000012126, Ubxn11, UBX domain protein 11, [RH, Score=171, Expect=1e-46]} {Smed: dd_Smed_v6_14940_0_1, dd_Smed_v6_14940_0_1, [RH, Score=201, Expect=7e-58]} {RNA1509_36469} {RNA1310_9386.1, RNA1509_36469} {RNA1509_36469, RNA815_3103}
17. MligTC455_32685 505 10.53 Mlig455_057075

Neo: -

Age: Up-Down-Up

 1.713 - - - 0.733 0.980 - Mlig455_057075 {REF} {Length: 7466} {Pfam: REJ domain [PF02010.17, score=62.8]} {RNA1509_14190, RNA1509_21224, RNA1509_37446, RNA1509_40150} {RNA1310_402.1, RNA1509_14190, RNA1509_21224, RNA1509_37446, RNA1509_40150} {RNA1509_14190, RNA1509_21224, RNA1509_37446, RNA1509_40150, RNA815_93.1}
18. MligTC455_31095 322 6.71 Mlig455_013789

Neo: -

Age: logFC(26M/2M)=0.396

Region-enriched R8: 3.245/0.00236

 TRPA1 1.71 - - - - 0.952 0.758 Mlig455_013789 {REF} {Length: 4115} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=243.4]; Ankyrin repeats (many copies) [PF13637.8, score=217.2]; Ankyrin repeat [PF00023.32, score=188.8]; Ankyrin repeats (many copies) [PF13857.8, score=188.8]; Ankyrin repeat [PF13606.8, score=182.5]; Ion transport protein [PF00520.33, score=39.5]} {Human: ENSG00000104321, TRPA1, transient receptor potential cation channel subfamily A member 1, [Score=281, Expect=5e-78]} {Mouse: ENSMUSG00000032769, Trpa1, transient receptor potential cation channel, subfamily A, member 1, [Score=265, Expect=7e-73]} {Dmel: FBgn0035934, TrpA1, Transient receptor potential cation channel A1, [Score=320, Expect=2e-91]} {Celegans: WBGene00007801, trpa-1, Transient receptor potential cation channel subfamily A member 1 homolog, [Score=269, Expect=4e-74]} {Smed: dd_Smed_v6_20683_0_1, dd_Smed_v6_20683_0_1, [Score=482, Expect=9e-152]} {RNA1509_56707, RNA1509_8449} {RNA1310_3264.1, RNA1509_56707, RNA1509_8449} {RNA1509_56707, RNA1509_8449, RNA815_808.1}
19. MligTC455_18258 406 8.45 Mlig455_028823

Neo: -

Age: -

 1.703 - - 0.727 - 0.976 - Mlig455_028823 {REF} {Length: 5290} {TRANSSPLICED} {Pfam: Neuralized [PF07177.14, score=84.3]; C-terminal of Roc, COR, domain [PF16095.7, score=81.1]; TIR domain [PF13676.8, score=69.0]; Ras of Complex, Roc, domain of DAPkinase [PF08477.15, score=39.7]; Death domain [PF00531.24, score=32.7]} {Mouse: ENSMUSG00000047180, Neurl3, neuralized E3 ubiquitin protein ligase 3, [RH, Score=58.5, Expect=1e-08]} {Smed: dd_Smed_v6_6002_0_1, dd_Smed_v6_6002_0_1, [RH, Score=318, Expect=8e-90]} {RNA1509_12960, RNA1509_39690} {RNA1310_3368.1, RNA1509_12960, RNA1509_39690} {RNA1509_12960, RNA1509_39690, RNA815_1587}
20. MligTC455_07835 37 0.78 Mlig455_008597

Neo: -

Age: -

 FCN2 1.695 - - - 0.738 0.957 - Mlig455_008597 {REF} {Length: 1119} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=165.1]} {Human: ENSG00000160339, FCN2, ficolin 2, [RH, Score=150, Expect=3e-43]; ENSG00000085265, FCN1, ficolin 1, [RH, Score=148, Expect=8e-42]; ENSG00000130720, FIBCD1, fibrinogen C domain containing 1, [RH, Score=144, Expect=5e-39]} {Mouse: ENSMUSG00000026841, Fibcd1, fibrinogen C domain containing 1, [RH, Score=145, Expect=1e-39]} {Dmel: FBgn0003326, sca, scabrous, [RH, Score=126, Expect=4e-32]} {Smed: dd_Smed_v6_74244_0_1, dd_Smed_v6_74244_0_1, [Score=59.3, Expect=4e-11]} {RNA1509_26827} {RNA1310_31840} {RNA815_17173.1}
21. MligTC455_28070 31 0.65 Mlig455_003961

Neo: -

Age: Up-Down-Down

 0.983 - - - - 0.983 - Mlig455_003961 {REF} {Length: 2138} {NoTransDecoderORF} {RNA1509_25022} {RNA1310_10847.1} {RNA815_23623}
22. MligTC455_21470 491 10.23 Mlig455_028994

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.236

 KCNMA1 0.974 - - - - 0.974 - Mlig455_028994 {REF} {Length: 4059} {Pfam: Calcium-activated BK potassium channel alpha subunit [PF03493.20, score=82.1]; Ion channel [PF07885.18, score=48.7]; Ion transport protein [PF00520.33, score=31.6]; TrkA-N domain [PF02254.20, score=27.3]} {Human: ENSG00000156113, KCNMA1, potassium calcium-activated channel subfamily M alpha 1, [Score=484, Expect=1e-151]} {Mouse: ENSMUSG00000063142, Kcnma1, potassium large conductance calcium-activated channel, subfamily M, alpha member 1, [Score=482, Expect=5e-151]} {Dmel: FBgn0003429, slo, slowpoke, [Score=479, Expect=1e-150]} {Celegans: WBGene00004830, slo-1, Calcium-activated potassium channel slo-1, [Score=461, Expect=5e-144]} {Smed: dd_Smed_v6_5509_0_1, dd_Smed_v6_5509_0_1, [Score=490, Expect=3e-155]} {RNA1509_10617} {RNA1310_2480.1} {RNA815_984.1}
23. MligTC455_14236 149 3.1 Mlig455_017105

Neo: -

Age: Up-Down-Down

 WDSUB1 0.973 - - - - 0.973 - Mlig455_017105 {REF} {Length: 3758} {Pfam: WD domain, G-beta repeat [PF00400.34, score=166.2]; U-box domain [PF04564.17, score=59.8]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=48.5]; SAM domain (Sterile alpha motif) [PF07647.19, score=44.6]; SAM domain (Sterile alpha motif) [PF00536.32, score=42.6]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=28.6]} {Human: ENSG00000196151, WDSUB1, WD repeat, sterile alpha motif and U-box domain containing 1, [Score=210, Expect=2e-60]} {Mouse: ENSMUSG00000026988, Wdsub1, WD repeat, SAM and U-box domain containing 1, [Score=197, Expect=2e-56]} {Dmel: FBgn0021874, Nle, Notchless, [Score=105, Expect=9e-24]} {Celegans: WBGene00003047, lis-1, Lissencephaly-1 homolog, [Score=99.0, Expect=5e-22]} {Smed: dd_Smed_v6_5139_0_1, dd_Smed_v6_5139_0_1, [Score=103, Expect=2e-24]} {RNA1310_51636} {RNA815_18559}
24. MligTC455_23843 66 1.38 Mlig455_000716

Neo: -

Age: -

 0.97 - - - - 0.970 - Mlig455_000716 {REF} {Length: 3789} {NoTransDecoderORF} {RNA1509_51543} {RNA1310_39627} {RNA815_33289}
25. MligTC455_21823 231 4.8 Mlig455_039344

Neo: -

Age: Down-Up-Down

 0.966 - - - - 0.966 - Mlig455_039344 {REF} {Length: 5107} {RNA1509_29876, RNA1509_44890} {RNA1310_5676, RNA1509_44890} {RNA1509_44890, RNA815_2024}
26. MligTC455_40463 120 2.51 Mlig455_028008

Neo: -

Age: -

 0.965 - - - - 0.965 - Mlig455_028008 {REF} {Length: 67} {NoTransDecoderORF} {RNA1509_5045} {RNA1310_14222} {RNA815_350}
27. MligTC455_39047 39 0.81 Mlig455_037921, Mlig455_038983

Neo: -

Age: -

 TNN 0.964 - - - - 0.964 -

Mlig455_037921 {REF} {Length: 4077} {Pfam: Fibrinogen beta and gamma chains, C-terminal globular domain [PF00147.20, score=111.9]} {Human: ENSG00000120332, TNN, tenascin N, [Score=95.5, Expect=1e-21]} {Mouse: ENSMUSG00000026725, Tnn, tenascin N, [Score=94.7, Expect=2e-21]} {Dmel: FBgn0050280, CG30280, [Score=87.0, Expect=3e-20]} {Celegans: WBGene00020516, T15B7.1, [Score=52.0, Expect=2e-07]} {Smed: dd_Smed_v6_18326_0_1, dd_Smed_v6_18326_0_1, [Score=73.6, Expect=1e-14]} {RNA1509_16377} {RNA1310_5710.1} {RNA815_14744.1}

Mlig455_038983 {REF} {Length: 2023} {RNA1310_108685} {RNA815_54007}
28. MligTC455_25224 37 0.76 Mlig455_008664, Mlig455_041970

Neo: -

Age: Up-Down-Down

 0.963 - - - - 0.963 -

Mlig455_008664 {REF} {Length: 5275} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=23.8]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_16253.2}

Mlig455_041970 {REF} {Length: 4204} {Pfam: Plasmodium histidine-rich protein (HRPII/III) [PF05403.13, score=23.8]} {RNA1509_44743} {RNA1310_5450.1} {RNA815_7136.1}
29. MligTC455_09830 66 1.37 Mlig455_040902

Neo: -

Age: -

 0.962 - - - - 0.962 - Mlig455_040902 {REF} {Length: 1141} {RNA1310_66500} {RNA815_46507}
30. MligTC455_53773 707 14.74 Mlig455_002240

Neo: -

Age: logFC(26M/2M)=-0.336

 ERICH3 0.962 - - - - 0.962 - Mlig455_002240 {REF} {Length: 6404} {Pfam: PLAT/LH2 domain [PF01477.25, score=233.3]; Domain of unknown function (DUF4590) [PF15257.8, score=138.1]; Embryo-specific protein 3, (ATS3) [PF06232.13, score=44.3]} {Human: ENSG00000178965, ERICH3, glutamate rich 3, [RH, Score=135, Expect=3e-31]} {Mouse: ENSMUSG00000078161, Erich3, glutamate rich 3, [RH, Score=127, Expect=1e-28]} {Celegans: WBGene00009201, F28C1.3, Protein phosphatase 1 regulatory subunit 37 homolog, [Score=59.3, Expect=2e-08]} {Smed: dd_Smed_v6_8627_0_1, dd_Smed_v6_8627_0_1, [Score=130, Expect=4e-30]} {RNA1509_1640} {RNA1310_3685} {RNA815_304.1}
31. MligTC455_43356 239 4.98 Mlig455_005859, Mlig455_028758

Neo: Int S/G2/M

Age: Down-Up-Down

 0.961 - - - - 0.961 -

Mlig455_005859 {REF} {Length: 2071} {Pfam: F5/8 type C domain [PF00754.27, score=19.9]} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=47.4, Expect=7e-07]} {RNA1509_36923} {RNA1310_31801.1} {RNA815_14193.1}

Mlig455_028758 {REF} {Length: 1755} {Smed: dd_Smed_v6_83746_0_1, dd_Smed_v6_83746_0_1, [Score=49.7, Expect=8e-08]} {RNA1509_36923} {RNA1310_31801.1} {RNA815_14193.1}
32. MligTC455_22412 271 5.65 Mlig455_057681, Mlig455_059990

Neo: -

Age: Down-Up-Up

 0.96 - - - - 0.960 -

Mlig455_057681 {REF} {Length: 2023} {RNA1509_30929} {RNA1310_27672} {RNA815_26534}

Mlig455_059990 {REF} {Length: 2023} {RNA1509_30929} {RNA1310_27672} {RNA815_26534}
33. MligTC455_21435 37 0.77 Mlig455_016499

Neo: -

Age: -

 RTL1 0.959 - - - - 0.959 - Mlig455_016499 {REF} {Length: 4412} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=104.0]; RNase H-like domain found in reverse transcriptase [PF17919.3, score=88.8]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.5]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=109, Expect=7e-24]} {Smed: dd_Smed_v6_1574_6_44, dd_Smed_v6_1574_6_44, [Score=278, Expect=5e-84]} {RNA1509_56816} {RNA1310_8523, RNA1509_56816}
34. MligTC455_22481 83 1.72 Mlig455_019186

Neo: -

Age: -

 0.959 - - - - 0.959 - Mlig455_019186 {REF} {Length: 1281} {RNA1509_29601} {RNA1310_30845} {RNA815_46080.1}
35. MligTC455_28795 109 2.27 Mlig455_013204

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.522

 ITPR1 0.959 - - - - 0.959 - Mlig455_013204 {REF} {Length: 7631} {Pfam: RIH domain [PF01365.23, score=97.9]; Inositol 1,4,5-trisphosphate/ryanodine receptor [PF08709.13, score=69.2]; RyR and IP3R Homology associated [PF08454.13, score=66.4]; MIR domain [PF02815.21, score=58.4]} {Human: ENSG00000150995, ITPR1, inositol 1,4,5-trisphosphate receptor type 1, [Score=230, Expect=1e-59]; ENSG00000096433, ITPR3, inositol 1,4,5-trisphosphate receptor type 3, [Score=229, Expect=2e-59]; ENSG00000123104, ITPR2, inositol 1,4,5-trisphosphate receptor type 2, [Score=223, Expect=1e-57]} {Mouse: ENSMUSG00000042644, Itpr3, inositol 1,4,5-triphosphate receptor 3, [Score=232, Expect=2e-60]} {Dmel: FBgn0010051, Itp-r83A, Inositol 1,4,5,-tris-phosphate receptor, [Score=148, Expect=5e-35]} {Celegans: WBGene00002173, itr-1, Inositol 1,4,5-trisphosphate receptor itr-1, [Score=140, Expect=1e-32]} {Smed: dd_Smed_v6_3814_1_1, dd_Smed_v6_3814_1_1, [Score=2169, Expect=0.0]} {RNA1509_2749} {RNA1310_3336.1} {RNA815_1122}
36. MligTC455_22773 138 2.87 Mlig455_026562

Neo: -

Age: -

 0.958 - - - - 0.958 - Mlig455_026562 {REF} {Length: 1348} {NoTransDecoderORF} {RNA1310_69367} {RNA815_45046}
37. MligTC455_12376 32 0.68 Mlig455_062734

Neo: -

Age: -

 0.957 - - - - 0.957 - Mlig455_062734 {REF} {Length: 61} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_78374}
38. MligTC455_29491 238 4.96 Mlig455_069524

Neo: Irradiation

Age: Up-Up-Down, logFC(26M/2M)=0.351

 0.956 - - - - 0.956 - Mlig455_069524 {REF} {Length: 3130} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=54.6]; TcdA/TcdB catalytic glycosyltransferase domain [PF12919.9, score=22.8]; Capsular polysaccharide synthesis protein [PF05704.14, score=22.3]} {Smed: dd_Smed_v6_42389_0_1, dd_Smed_v6_42389_0_1, [Score=109, Expect=2e-27]} {RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1310_12293.2, RNA1509_17162, RNA1509_41197, RNA1509_54683} {RNA1509_17162, RNA1509_41197, RNA1509_54683, RNA815_9107.2}
39. MligTC455_31068 152 3.16 Mlig455_041420

Neo: -

Age: -

 MAN2C1 0.956 - - - - 0.956 - Mlig455_041420 {REF} {Length: 5198} {TRANSSPLICED} {Pfam: Glycosyl hydrolases family 38 N-terminal domain [PF01074.24, score=253.1]; Glycosyl hydrolases family 38 C-terminal domain [PF07748.15, score=96.5]; Alpha mannosidase middle domain [PF09261.13, score=67.9]} {Human: ENSG00000140400, MAN2C1, mannosidase alpha class 2C member 1, [Score=567, Expect=0.0]} {Mouse: ENSMUSG00000032295, Man2c1, mannosidase, alpha, class 2C, member 1, [Score=555, Expect=0.0]} {Smed: dd_Smed_v6_7449_0_11, dd_Smed_v6_7449_0_11, [Score=683, Expect=0.0]} {RNA1509_13703, RNA1509_54285} {RNA1310_2504.1, RNA1509_54285} {RNA1509_54285, RNA815_715}
40. MligTC455_38917 43 0.9 Mlig455_065534

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_065534 {REF} {Length: 1123} {RNA1509_15277} {RNA1310_22069} {RNA815_17936.2}
41. MligTC455_42659 2799 58.31 Mlig455_009046, Mlig455_058134

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.179

 PACSIN2 0.956 - - - - 0.956 -

Mlig455_009046 {REF} {Length: 3055} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=54.6]; SH3 domain [PF00018.30, score=51.8]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=51.0]; Variant SH3 domain [PF07653.19, score=34.2]} {Human: ENSG00000100266, PACSIN2, protein kinase C and casein kinase substrate in neurons 2, [Score=325, Expect=5e-105]} {Mouse: ENSMUSG00000016664, Pacsin2, protein kinase C and casein kinase substrate in neurons 2, [RH, Score=335, Expect=2e-109]} {Dmel: FBgn0053094, Synd, Syndapin, [Score=285, Expect=4e-90]} {Celegans: WBGene00018467, sdpn-1, SynDaPiN (Synaptic dynamin binding protein) homolog, [Score=219, Expect=6e-65]} {Smed: dd_Smed_v6_7987_0_1, dd_Smed_v6_7987_0_1, [Score=351, Expect=1e-115]} {RNA1509_22117, RNA1509_37584} {RNA1310_9530, RNA1509_22117} {RNA1509_22117, RNA815_8193}

Mlig455_058134 {REF} {Length: 3083} {TRANSSPLICED} {Pfam: Variant SH3 domain [PF14604.8, score=54.5]; SH3 domain [PF00018.30, score=51.7]; Fes/CIP4, and EFC/F-BAR homology domain [PF00611.25, score=50.9]; Variant SH3 domain [PF07653.19, score=34.1]} {Human: ENSG00000100266, PACSIN2, protein kinase C and casein kinase substrate in neurons 2, [Score=322, Expect=1e-103]} {Mouse: ENSMUSG00000016664, Pacsin2, protein kinase C and casein kinase substrate in neurons 2, [Score=329, Expect=9e-107]} {Dmel: FBgn0053094, Synd, Syndapin, [Score=286, Expect=5e-90]} {Celegans: WBGene00018467, sdpn-1, SynDaPiN (Synaptic dynamin binding protein) homolog, [Score=187, Expect=7e-53]} {Smed: dd_Smed_v6_7987_0_1, dd_Smed_v6_7987_0_1, [Score=337, Expect=4e-110]} {RNA1509_37584} {RNA1310_9122.1} {RNA815_8193}
42. MligTC455_50643 38 0.8 Mlig455_007952, Mlig455_008053

Neo: -

Age: -

 VSX1 0.956 - - - - 0.956 -

Mlig455_007952 {REF} {Length: 1358} {Pfam: Homeodomain [PF00046.31, score=79.6]} {Human: ENSG00000100987, VSX1, visual system homeobox 1, [RH, Score=197, Expect=4e-60]; ENSG00000119614, VSX2, visual system homeobox 2, [RH, Score=196, Expect=2e-59]} {Mouse: ENSMUSG00000021239, Vsx2, visual system homeobox 2, [RH, Score=196, Expect=6e-60]; ENSMUSG00000033080, Vsx1, visual system homeobox 1, [RH, Score=195, Expect=2e-59]} {Dmel: FBgn0263512, Vsx2, Visual system homeobox 2, [RH, Score=204, Expect=3e-60]} {Celegans: WBGene00000435, ceh-10, Homeobox protein ceh-10, [RH, Score=204, Expect=2e-63]} {Smed: dd_Smed_v6_19286_0_1, dd_Smed_v6_19286_0_1, [RH, Score=211, Expect=2e-66]} {RNA1310_76393} {RNA815_51313}

Mlig455_008053 {REF} {Length: 2271} {RNA1310_76393} {RNA815_51313}
43. MligTC455_51339 75 1.56 Mlig455_024282

Neo: -

Age: -

 0.956 - - - - 0.956 - Mlig455_024282 {REF} {Length: 2404} {RNA1310_48051} {RNA815_14784}
44. MligTC455_03999 86 1.8 Mlig455_002026, Mlig455_002117, Mlig455_002223

Neo: Germline

Age: -

 0.955 - - - - 0.955 -

Mlig455_002026 {REF} {Length: 461} {RNA1310_65306}

Mlig455_002117 {REF} {Length: 461} {RNA1310_65306}

Mlig455_002223 {REF} {Length: 925} {RNA1310_65306} {RNA815_64331}
45. MligTC455_25744 405 8.44 Mlig455_043982

Neo: -

Age: Down-Up-Down

 ZNF148 0.955 - - - - 0.955 - Mlig455_043982 {REF} {Length: 2987} {Pfam: C2H2-type zinc finger [PF13894.8, score=30.6]; Zinc-finger double domain [PF13465.8, score=28.3]; Zinc finger, C2H2 type [PF00096.28, score=26.6]} {Human: ENSG00000163848, ZNF148, zinc finger protein 148, [Score=65.1, Expect=9e-11]; ENSG00000197714, ZNF460, zinc finger protein 460, [Score=62.8, Expect=4e-10]; ENSG00000197483, ZNF628, zinc finger protein 628, [Score=62.4, Expect=8e-10]} {Mouse: ENSMUSG00000022811, Zfp148, zinc finger protein 148, [Score=65.1, Expect=7e-11]; ENSMUSG00000074406, Zfp628, zinc finger protein 628, [Score=62.0, Expect=6e-10]} {Dmel: FBgn0002521, pho, pleiohomeotic, [Score=60.1, Expect=1e-09]} {Celegans: WBGene00043705, egrh-2, EGR (Early Growth factor Response factor) Homolog, [Score=58.2, Expect=2e-10]} {Smed: dd_Smed_v6_6684_0_1, dd_Smed_v6_6684_0_1, [Score=59.7, Expect=1e-09]} {RNA1509_10912} {RNA1310_6828} {RNA815_16823}
46. MligTC455_30256 48 0.99 Mlig455_003751, Mlig455_053129

Neo: -

Age: logFC(26M/2M)=-2.069

 0.954 - - - - 0.954 -

Mlig455_003751 {REF} {Length: 2349} {TRANSSPLICED} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=53.4]} {Smed: dd_Smed_v6_18385_0_1, dd_Smed_v6_18385_0_1, [Score=89.0, Expect=7e-20]} {RNA1509_31144} {RNA1310_15076.1} {RNA815_5159.1}

Mlig455_053129 {REF} {Length: 2316} {Pfam: Domain of unknown function (DUF4806) [PF16064.7, score=24.2]} {RNA1509_31144, RNA1509_40622} {RNA1310_15076.1, RNA1509_40622} {RNA1509_40622, RNA815_5159.1}
47. MligTC455_47962 1186 24.7 Mlig455_013564, Mlig455_013618

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=-0.250

Region-enriched R4: 1.616/0.00549

 0.954 - - - - 0.954 -

Mlig455_013564 {REF} {Length: 2951} {TRANSSPLICED} {RNA1509_26875, RNA1509_46492} {RNA1310_9354.2, RNA1509_26875, RNA1509_46492} {RNA1509_26875, RNA1509_46492, RNA815_12277.1}

Mlig455_013618 {REF} {Length: 3260} {TRANSSPLICED} {RNA1509_21658, RNA1509_26875} {RNA1310_9354.2, RNA1509_21658} {RNA1509_21658, RNA815_12277.2}
48. MligTC455_00649 13 0.28 Mlig455_014001

Neo: -

Age: -

 0.953 - - - - 0.953 - Mlig455_014001 {REF} {Length: 525} {NoTransDecoderORF} {RNA1310_40460}
49. MligTC455_19232 31 0.65 Mlig455_059817, Mlig455_061500

Neo: -

Age: -

 0.953 - - - - 0.953 -

Mlig455_059817 {REF} {Length: 1369} {RNA1310_23693} {RNA815_52682}

Mlig455_061500 {REF} {Length: 1202} {RNA1310_23693} {RNA815_52682}
50. MligTC455_05193 189 3.94 Mlig455_013094

Neo: -

Age: Down-Up-Down

 BCHE 0.952 - - - - 0.952 - Mlig455_013094 {REF} {Length: 2979} {Pfam: Carboxylesterase family [PF00135.30, score=435.7]; alpha/beta hydrolase fold [PF07859.15, score=35.5]} {Human: ENSG00000114200, BCHE, butyrylcholinesterase, [RH, Score=319, Expect=5e-100]} {Mouse: ENSMUSG00000027792, Bche, butyrylcholinesterase, [RH, Score=334, Expect=3e-105]} {Dmel: FBgn0000024, Ace, Acetylcholine esterase, [Score=253, Expect=3e-74]} {Celegans: WBGene00000035, ace-1, Acetylcholinesterase 1, [RH, Score=332, Expect=2e-104]} {Smed: dd_Smed_v6_15930_0_1, dd_Smed_v6_15930_0_1, [RH, Score=416, Expect=5e-136]} {RNA1509_5880} {RNA1310_9146.1} {RNA815_3169.2}
51. MligTC455_10701 47 0.97 Mlig455_011740

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_011740 {REF} {Length: 4438} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=102.5]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=97.1]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=73.4]; Integrase zinc binding domain [PF17921.3, score=57.0]; Integrase core domain [PF00665.28, score=50.1]; gag-polyprotein putative aspartyl protease [PF13975.8, score=33.8]; Aspartyl protease [PF13650.8, score=25.7]; Retroviral aspartyl protease [PF00077.22, score=20.4]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=271, Expect=3e-75]} {RNA1509_54157} {RNA1310_5940.1} {RNA815_7551.1}
52. MligTC455_11619 48 1 Mlig455_015930, Mlig455_059692

Neo: -

Age: -

 CPNE3 0.952 - - - - 0.952 -

Mlig455_015930 {REF} {Length: 2409} {Pfam: C2 domain [PF00168.32, score=33.7]} {Human: ENSG00000085719, CPNE3, copine 3, [Score=87.4, Expect=6e-19]} {Mouse: ENSMUSG00000028228, Cpne3, copine III, [Score=85.5, Expect=2e-18]; ENSMUSG00000074643, Cpne1, copine I, [Score=81.6, Expect=2e-17]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=57.0, Expect=5e-09]} {Smed: dd_Smed_v6_2149_0_4, dd_Smed_v6_2149_0_4, [Score=75.1, Expect=3e-15]} {RNA1310_39685} {RNA815_22508}

Mlig455_059692 {REF} {Length: 2378} {Pfam: C2 domain [PF00168.32, score=33.7]} {Human: ENSG00000085719, CPNE3, copine 3, [Score=87.8, Expect=4e-19]} {Mouse: ENSMUSG00000028228, Cpne3, copine III, [Score=85.9, Expect=1e-18]} {Celegans: WBGene00012128, nra-1, Nicotinic receptor-associated protein 1, [Score=55.5, Expect=1e-08]} {Smed: dd_Smed_v6_2149_0_4, dd_Smed_v6_2149_0_4, [Score=75.1, Expect=3e-15]} {RNA1310_39685} {RNA815_22508}
53. MligTC455_38070 21 0.43 Mlig455_055979

Neo: -

Age: -

 0.952 - - - - 0.952 - Mlig455_055979 {REF} {Length: 3735} {RNA1310_50449}
54. MligTC455_03504 344 7.16 Mlig455_042601, Mlig455_042680

Neo: -

Age: -

 TRIM71 0.951 - - - - 0.951 -

Mlig455_042601 {REF} {Length: 1944} {TRANSSPLICED} {Pfam: B-box zinc finger [PF00643.26, score=52.4]} {Human: ENSG00000206557, TRIM71, tripartite motif containing 71, [Score=61.6, Expect=2e-09]} {Mouse: ENSMUSG00000079259, Trim71, tripartite motif-containing 71, [Score=62.8, Expect=7e-10]} {Dmel: FBgn0031999, CG8419, [Score=55.5, Expect=9e-08]} {Smed: dd_Smed_v6_8395_0_1, dd_Smed_v6_8395_0_1, [Score=107, Expect=2e-24]} {RNA1509_53675} {RNA1310_29759} {RNA815_39084}

Mlig455_042680 {REF} {Length: 2304} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4207) [PF13904.8, score=36.6]} {Smed: dd_Smed_v6_8117_0_1, dd_Smed_v6_8117_0_1, [Score=77.8, Expect=3e-15]} {RNA1509_19205} {RNA1310_10802.1} {RNA815_4389.1}
55. MligTC455_06426 14 0.3 Mlig455_045703

Neo: -

Age: -

 0.951 - - - - 0.951 - Mlig455_045703 {REF} {Length: 756} {NoTransDecoderORF} {RNA1310_88574} {RNA815_52979}
56. MligTC455_17499 135 2.81 Mlig455_000190, Mlig455_067703

Neo: -

Age: -

 ANKRD44 0.951 - - - - 0.951 -

Mlig455_000190 {REF} {Length: 1504} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=86.3]; Ankyrin repeats (many copies) [PF13637.8, score=73.9]; Ankyrin repeats (many copies) [PF13857.8, score=53.6]; Ankyrin repeat [PF00023.32, score=49.1]; Ankyrin repeat [PF13606.8, score=45.9]} {Human: ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=78.2, Expect=1e-14]} {Mouse: ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=75.5, Expect=5e-14]} {Smed: dd_Smed_v6_21003_0_1, dd_Smed_v6_21003_0_1, [Score=59.7, Expect=3e-09]} {RNA1509_51450} {RNA1310_16797} {RNA815_9033}

Mlig455_067703 {REF} {Length: 901} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=25.4]; Ankyrin repeats (many copies) [PF13637.8, score=21.9]} {RNA1509_51450} {RNA1310_16797} {RNA815_9033}
57. MligTC455_19012 73 1.52 Mlig455_023546, Mlig455_023674

Neo: -

Age: -

 CASP3, INVS 0.951 - - - - 0.951 -

Mlig455_023546 {REF} {Length: 3342} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=84.3]; Ankyrin repeats (many copies) [PF13637.8, score=57.6]; Ankyrin repeats (many copies) [PF13857.8, score=56.9]; Ankyrin repeat [PF00023.32, score=56.6]; Ankyrin repeat [PF13606.8, score=50.1]; Caspase domain [PF00656.24, score=45.2]} {Human: ENSG00000119509, INVS, inversin, [Score=67.8, Expect=3e-11]} {Mouse: ENSMUSG00000028344, Invs, inversin, [Score=63.5, Expect=4e-10]} {Dmel: FBgn0016920, nompC, no mechanoreceptor potential C, [Score=60.8, Expect=2e-09]} {Celegans: WBGene00000821, csp-3, Non-catalytic caspase homolog csp-3, [RH, Score=56.2, Expect=2e-09]} {Smed: dd_Smed_v6_16314_0_1, dd_Smed_v6_16314_0_1, [Score=52.4, Expect=4e-07]} {RNA1509_53346} {RNA1310_9699} {RNA815_6436}

Mlig455_023674 {REF} {Length: 6646} {Pfam: Caspase domain [PF00656.24, score=109.6]; Ankyrin repeats (3 copies) [PF12796.9, score=83.0]; Ankyrin repeats (many copies) [PF13637.8, score=56.3]; Ankyrin repeats (many copies) [PF13857.8, score=55.1]; Ankyrin repeat [PF00023.32, score=54.3]; Ankyrin repeat [PF13606.8, score=48.2]} {Human: ENSG00000164305, CASP3, caspase 3, [Score=107, Expect=2e-25]} {Mouse: ENSMUSG00000031628, Casp3, caspase 3, [Score=101, Expect=3e-23]; ENSMUSG00000025076, Casp7, caspase 7, [Score=96.7, Expect=1e-21]} {Dmel: FBgn0019972, Drice, Death related ICE-like caspase, [Score=89.0, Expect=7e-19]} {Celegans: WBGene00000819, csp-1, Caspase A Caspase A subunit p16 Caspase A subunit p14, [Score=85.1, Expect=4e-18]} {Smed: dd_Smed_v6_4986_0_1, dd_Smed_v6_4986_0_1, [Score=97.1, Expect=2e-22]} {RNA1509_53346} {RNA1310_9699} {RNA815_6436}
58. MligTC455_27383 391 8.14 Mlig455_015315, Mlig455_016513, Mlig455_032996, Mlig455_047371, Mlig455_052716, Mlig455_062076

Neo: -

Age: Down-Up-Down

Region-enriched R7: 2.778/0.03706

 0.951 - - - - 0.951 -

Mlig455_015315 {REF} {Length: 780} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_016513 {REF} {Length: 766} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_032996 {REF} {Length: 651} {RNA1509_47082} {RNA1310_18896.2} {RNA815_9379}

Mlig455_047371 {REF} {Length: 2669} {TRANSSPLICED} {RNA1509_47082} {RNA1310_9596, RNA1509_47082} {RNA1509_47082, RNA815_8903}

Mlig455_052716 {REF} {Length: 782} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}

Mlig455_062076 {REF} {Length: 767} {TRANSSPLICED} {RNA1509_47082} {RNA1310_18896.1} {RNA815_9379}
59. MligTC455_30287 58 1.21 Mlig455_047054

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.661

Region-enriched R4: 5.589/0.02506

 MAP3K6 0.951 - - - - 0.951 - Mlig455_047054 {REF} {Length: 3219} {Pfam: Protein kinase domain [PF00069.27, score=161.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=119.7]; Ankyrin repeats (3 copies) [PF12796.9, score=70.4]; Ankyrin repeats (many copies) [PF13857.8, score=47.2]; Ankyrin repeats (many copies) [PF13637.8, score=44.2]; Ankyrin repeat [PF13606.8, score=40.0]; Ankyrin repeat [PF00023.32, score=34.7]; Fungal protein kinase [PF17667.3, score=24.3]; Phosphotransferase enzyme family [PF01636.25, score=20.2]} {Human: ENSG00000142733, MAP3K6, mitogen-activated protein kinase kinase kinase 6, [Score=130, Expect=2e-30]; ENSG00000085511, MAP3K4, mitogen-activated protein kinase kinase kinase 4, [Score=127, Expect=2e-29]} {Mouse: ENSMUSG00000028862, Map3k6, mitogen-activated protein kinase kinase kinase 6, [Score=133, Expect=1e-31]} {Dmel: FBgn0024329, Mekk1, [Score=128, Expect=4e-30]} {Celegans: WBGene00003472, mtk-1, MTK1/MEKK4 homolog, [Score=129, Expect=2e-30]} {Smed: dd_Smed_v6_4849_0_1, dd_Smed_v6_4849_0_1, [Score=113, Expect=1e-25]} {RNA1509_27731} {RNA1310_10050} {RNA815_9449.1}
60. MligTC455_15913 197 4.11 Mlig455_055582

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.633

 0.95 - - - - 0.950 - Mlig455_055582 {REF} {Length: 2651} {Pfam: Universal stress protein family [PF00582.28, score=78.3]} {Smed: dd_Smed_v6_7254_0_1, dd_Smed_v6_7254_0_1, [RH, Score=107, Expect=4e-29]} {RNA1509_30118, RNA1509_39041} {RNA1310_41795.1, RNA1509_39041} {RNA1509_39041, RNA815_18378}
61. MligTC455_19441 305 6.35 Mlig455_001985

Neo: -

Age: logFC(26M/2M)=-0.555

Region-enriched R2: 2.029/0.00606

 0.95 - - - 0.950 - - Mlig455_001985 {REF} {Length: 2497} {RNA1509_40470} {RNA1310_22476.3, RNA1509_40470} {RNA1509_40470, RNA815_16128}
62. MligTC455_41517 18 0.37 Mlig455_018289

Neo: -

Age: -

 0.95 - - - - 0.950 - Mlig455_018289 {REF} {Length: 3393} {TRANSSPLICED} {RNA1509_58315} {RNA1310_24815} {RNA815_16210}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA