Data search
Results for MligTC455_30294
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30294 | 12932 | 269.41 | Mlig455_045665 | Neo: - Age: - |
Mlig455_045665 {REF} {Length: 746} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13718, RNA1509_202} {RNA1310_17976.1, RNA1509_13718} {RNA1509_13718, RNA815_4359.1} |
Cumulative graph for MligTC455_30294
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.907 | 8.144 | 0.00000 | 0.00091 | |
| RegionR2 | 0.13 | 8.144 | 0.54446 | 0.91119 | |
| RegionR3 | 0.711 | 8.144 | 0.00004 | 0.00225 | |
| RegionR4 | 0.777 | 8.144 | 0.00009 | 0.00145 | |
| RegionR5 | 0.676 | 8.144 | 0.00006 | 0.00103 | |
| RegionR6 | 0.378 | 8.144 | 0.03617 | 0.35486 | |
| RegionR7 | -0.205 | 8.144 | 0.30733 | 0.94199 | |
| RegionR8 | -0.559 | 8.144 | 0.01715 | 0.25450 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.391 | 8.144 | 0.43486 | 1.00000 | |
| RegenerationR2 | -0.248 | 8.144 | 0.25437 | 0.70106 | |
| RegenerationR3 | -0.267 | 8.144 | 0.22713 | 0.66236 | |
| RegenerationR4 | -0.181 | 8.144 | 0.42267 | 0.82678 | |
| RegenerationR5 | 0.028 | 8.144 | 0.89791 | 1.00000 | |
| RegenerationR6 | 0.361 | 8.144 | 0.10189 | 0.39528 | |
| RegenerationBL | 0.868 | 8.144 | 0.00001 | 0.00084 | |
| RegenerationTP | 0.638 | 8.144 | 0.00419 | 0.10746 |
Genes with expression patterns similar to MligTC455_30294
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30294 | 12932 | 269.41 | Mlig455_045665 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_045665 {REF} {Length: 746} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13718, RNA1509_202} {RNA1310_17976.1, RNA1509_13718} {RNA1509_13718, RNA815_4359.1} | |
| 2. | MligTC455_30293 | 12989 | 270.61 | Mlig455_045616 | Neo: - |
VDAC2 | 5.984 | 0.999 | 1.000 | 0.986 | 0.999 | 1.000 | 1.000 | Mlig455_045616 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=217.7]} {Human: ENSG00000165637, VDAC2, voltage dependent anion channel 2, [RH, Score=272, Expect=8e-91]; ENSG00000213585, VDAC1, voltage dependent anion channel 1, [RH, Score=269, Expect=1e-89]} {Mouse: ENSMUSG00000021771, Vdac2, voltage-dependent anion channel 2, [RH, Score=271, Expect=1e-90]; ENSMUSG00000020402, Vdac1, voltage-dependent anion channel 1, [RH, Score=267, Expect=3e-89]} {Dmel: FBgn0004363, porin, [RH, Score=258, Expect=7e-86]} {Celegans: WBGene00019900, vdac-1, Probable voltage-dependent anion-selective channel, [RH, Score=166, Expect=5e-50]} {Smed: dd_Smed_v6_2119_0_1, dd_Smed_v6_2119_0_1, [RH, Score=200, Expect=5e-63]} {RNA1509_202} {RNA1310_17976.1} {RNA815_4359.1} |
| 3. | MligTC455_39657 | 4482 | 93.38 | Mlig455_068861 | Neo: - Age: Down-Up-Up Region-enriched R4: 1.346/0.00000 |
PSMA4 | 1.812 | - | - | 0.851 | - | 0.961 | - | Mlig455_068861 {REF} {Length: 1248} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=189.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=52.8]} {Human: ENSG00000041357, PSMA4, proteasome subunit alpha 4, [RH, Score=363, Expect=6e-128]} {Mouse: ENSMUSG00000032301, Psma4, proteasome (prosome, macropain) subunit, alpha type 4, [RH, Score=363, Expect=7e-128]} {Dmel: FBgn0261394, Prosalpha3, Proteasome alpha3 subunit, [RH, Score=305, Expect=4e-105]} {Celegans: WBGene00003924, pas-3, Proteasome subunit alpha type-4, [RH, Score=298, Expect=1e-102]} {Smed: dd_Smed_v6_1541_0_1, dd_Smed_v6_1541_0_1, [RH, Score=373, Expect=4e-132]} {RNA1509_32494, RNA1509_48928, RNA1509_58437, RNA1509_7476} {RNA1310_28223.1, RNA1509_32494, RNA1509_48928, RNA1509_58437, RNA1509_7476} {RNA1509_32494, RNA1509_48928, RNA1509_58437, RNA1509_7476, RNA815_9797} |
| 4. | MligTC455_39659 | 6052 | 126.08 | Mlig455_068875 | Neo: - Age: - Region-enriched R4: 1.032/0.00006 |
PSMA4 | 1.792 | - | - | 0.840 | - | 0.952 | - | Mlig455_068875 {REF} {Length: 1251} {TRANSSPLICED} {Pfam: Proteasome subunit [PF00227.28, score=189.8]; Proteasome subunit A N-terminal signature [PF10584.11, score=52.8]} {Human: ENSG00000041357, PSMA4, proteasome subunit alpha 4, [RH, Score=363, Expect=6e-128]} {Mouse: ENSMUSG00000032301, Psma4, proteasome (prosome, macropain) subunit, alpha type 4, [RH, Score=363, Expect=7e-128]} {Dmel: FBgn0261394, Prosalpha3, Proteasome alpha3 subunit, [RH, Score=305, Expect=4e-105]} {Celegans: WBGene00003924, pas-3, Proteasome subunit alpha type-4, [RH, Score=298, Expect=1e-102]} {Smed: dd_Smed_v6_1541_0_1, dd_Smed_v6_1541_0_1, [RH, Score=373, Expect=4e-132]} {RNA1509_7476} {RNA1310_28223.1} {RNA815_9797} |
| 5. | MligTC455_44671 | 2888 | 60.17 | Mlig455_020173 | Neo: Neoblast, stringent Age: - Region-enriched R4: 1.271/0.00838 |
LIN52 | 0.961 | - | - | - | - | 0.961 | - | Mlig455_020173 {REF} {Length: 852} {Pfam: Retinal tissue protein [PF10044.11, score=42.4]} {Human: ENSG00000205659, LIN52, lin-52 DREAM MuvB core complex component, [RH, Score=61.6, Expect=4e-13]} {Mouse: ENSMUSG00000085793, Lin52, lin-52 homolog (C. elegans), [RH, Score=61.6, Expect=3e-13]} {Smed: dd_Smed_v6_3779_0_1, dd_Smed_v6_3779_0_1, [RH, Score=64.7, Expect=6e-15]} {RNA1509_41672, RNA1509_49420, RNA1509_6727} {RNA1310_42956.3, RNA1509_41672, RNA1509_49420} {RNA1509_41672, RNA1509_49420, RNA815_25162.1} |
| 6. | MligTC455_36833 | 3066 | 63.87 | Mlig455_051663 | Neo: - Age: - |
RNASEK | 0.958 | - | - | - | - | 0.958 | - | Mlig455_051663 {REF} {Length: 1148} {TRANSSPLICED} {Human: ENSG00000219200, RNASEK, ribonuclease K, [RH, Score=79.7, Expect=5e-20]} {Mouse: ENSMUSG00000040904, Gm21988, predicted gene 21988, [RH, Score=79.0, Expect=2e-20]; ENSMUSG00000093989, Rnasek, ribonuclease, RNase K, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0262116, RNASEK, Ribonuclease kappa, [RH, Score=72.4, Expect=6e-18]} {Celegans: WBGene00009881, F49C12.12, [Score=64.7, Expect=4e-15]} {Smed: dd_Smed_v6_1020_0_1, dd_Smed_v6_1020_0_1, [RH, Score=96.7, Expect=9e-28]} {RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1310_30609, RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1509_14152, RNA1509_18600, RNA1509_21585, RNA815_13737.1} |
Berezikov Lab - 2020-2021 © ERIBA