Data search
Results for MligTC455_44671
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_44671 | 2888 | 60.17 | Mlig455_020173 | Neo: Neoblast, stringent Age: - Region-enriched R4: 1.271/0.00838 |
LIN52 | Mlig455_020173 {REF} {Length: 852} {Pfam: Retinal tissue protein [PF10044.11, score=42.4]} {Human: ENSG00000205659, LIN52, lin-52 DREAM MuvB core complex component, [RH, Score=61.6, Expect=4e-13]} {Mouse: ENSMUSG00000085793, Lin52, lin-52 homolog (C. elegans), [RH, Score=61.6, Expect=3e-13]} {Smed: dd_Smed_v6_3779_0_1, dd_Smed_v6_3779_0_1, [RH, Score=64.7, Expect=6e-15]} {RNA1509_41672, RNA1509_49420, RNA1509_6727} {RNA1310_42956.3, RNA1509_41672, RNA1509_49420} {RNA1509_41672, RNA1509_49420, RNA815_25162.1} |
Cumulative graph for MligTC455_44671
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -1.162 | 6.091 | 0.07507 | 0.60593 | |
| RegionR2 | -0.634 | 6.091 | 0.13089 | 0.44882 | |
| RegionR3 | -0.156 | 6.091 | 0.66499 | 1.00000 | |
| RegionR4 | 1.271 | 6.091 | 0.00076 | 0.00838 | |
| RegionR5 | 0.735 | 6.091 | 0.02416 | 0.11097 | |
| RegionR6 | 0.383 | 6.091 | 0.26746 | 0.85598 | |
| RegionR7 | 0.192 | 6.091 | 0.59356 | 1.00000 | |
| RegionR8 | -0.628 | 6.091 | 0.15285 | 0.70867 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -3.06 | 6.091 | 0.01636 | 0.53962 | |
| RegenerationR2 | -0.069 | 6.091 | 0.87191 | 1.00000 | |
| RegenerationR3 | 0.19 | 6.091 | 0.66591 | 0.93565 | |
| RegenerationR4 | -0.646 | 6.091 | 0.15015 | 0.57814 | |
| RegenerationR5 | -0.355 | 6.091 | 0.40078 | 0.79987 | |
| RegenerationR6 | -0.229 | 6.091 | 0.59925 | 0.86822 | |
| RegenerationBL | 0.329 | 6.091 | 0.40087 | 0.76987 | |
| RegenerationTP | 0.483 | 6.091 | 0.25912 | 0.70691 |
Genes with expression patterns similar to MligTC455_44671
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_44671 | 2888 | 60.17 | Mlig455_020173 | Neo: Neoblast, stringent Age: - Region-enriched R4: 1.271/0.00838 |
LIN52 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_020173 {REF} {Length: 852} {Pfam: Retinal tissue protein [PF10044.11, score=42.4]} {Human: ENSG00000205659, LIN52, lin-52 DREAM MuvB core complex component, [RH, Score=61.6, Expect=4e-13]} {Mouse: ENSMUSG00000085793, Lin52, lin-52 homolog (C. elegans), [RH, Score=61.6, Expect=3e-13]} {Smed: dd_Smed_v6_3779_0_1, dd_Smed_v6_3779_0_1, [RH, Score=64.7, Expect=6e-15]} {RNA1509_41672, RNA1509_49420, RNA1509_6727} {RNA1310_42956.3, RNA1509_41672, RNA1509_49420} {RNA1509_41672, RNA1509_49420, RNA815_25162.1} |
| 2. | MligTC455_42722 | 968 | 20.17 | Mlig455_047964 | Neo: Neoblast Age: Down-Up-Down Regeneration-upregulated BL: 2.079 Regeneration-enriched BL: 2.079 |
BRIX1 | 1.744 | - | - | - | 0.788 | 0.956 | - | Mlig455_047964 {REF} {Length: 1456} {TRANSSPLICED} {Pfam: Brix domain [PF04427.20, score=103.6]} {Human: ENSG00000113460, BRIX1, BRX1, biogenesis of ribosomes, [RH, Score=267, Expect=3e-87]} {Mouse: ENSMUSG00000022247, Brix1, BRX1, biogenesis of ribosomes, [RH, Score=268, Expect=7e-88]} {Dmel: FBgn0035524, CG11583, [RH, Score=275, Expect=2e-90]} {Celegans: WBGene00019678, K12H4.3, Ribosome biogenesis protein BRX1 homolog, [RH, Score=248, Expect=3e-80]} {Smed: dd_Smed_v6_4683_0_1, dd_Smed_v6_4683_0_1, [RH, Score=223, Expect=3e-71]} {RNA1509_21746, RNA1509_35345, RNA1509_6627} {RNA1310_20895, RNA1509_21746, RNA1509_35345, RNA1509_6627} {RNA1509_21746, RNA1509_35345, RNA1509_6627, RNA815_9366} |
| 3. | MligTC455_33866 | 390 | 8.13 | Mlig455_005035 | Neo: - Age: - |
MED13 | 0.963 | - | - | - | 0.963 | - | - | Mlig455_005035 {REF} {Length: 6760} {Pfam: Mediator complex subunit 13 C-terminal domain [PF06333.14, score=204.1]; Mediator complex subunit 13 N-terminal [PF11597.10, score=50.9]} {Human: ENSG00000108510, MED13, mediator complex subunit 13, [RH, Score=213, Expect=1e-54]} {Mouse: ENSMUSG00000034297, Med13, mediator complex subunit 13, [RH, Score=213, Expect=8e-55]} {Dmel: FBgn0003415, skd, skuld, [RH, Score=199, Expect=1e-50]} {Celegans: WBGene00002295, let-19, Mediator of RNA polymerase II transcription subunit 13, [RH, Score=145, Expect=2e-34]} {Smed: dd_Smed_v6_5628_0_1, dd_Smed_v6_5628_0_1, [RH, Score=177, Expect=4e-44]} {RNA1509_5621} {RNA1310_887} {RNA815_2444} |
| 4. | MligTC455_30294 | 12932 | 269.41 | Mlig455_045665 | Neo: - Age: - |
0.961 | - | - | - | - | 0.961 | - | Mlig455_045665 {REF} {Length: 746} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_13718, RNA1509_202} {RNA1310_17976.1, RNA1509_13718} {RNA1509_13718, RNA815_4359.1} | |
| 5. | MligTC455_30293 | 12989 | 270.61 | Mlig455_045616 | Neo: - |
VDAC2 | 0.96 | - | - | - | - | 0.960 | - | Mlig455_045616 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Eukaryotic porin [PF01459.24, score=217.7]} {Human: ENSG00000165637, VDAC2, voltage dependent anion channel 2, [RH, Score=272, Expect=8e-91]; ENSG00000213585, VDAC1, voltage dependent anion channel 1, [RH, Score=269, Expect=1e-89]} {Mouse: ENSMUSG00000021771, Vdac2, voltage-dependent anion channel 2, [RH, Score=271, Expect=1e-90]; ENSMUSG00000020402, Vdac1, voltage-dependent anion channel 1, [RH, Score=267, Expect=3e-89]} {Dmel: FBgn0004363, porin, [RH, Score=258, Expect=7e-86]} {Celegans: WBGene00019900, vdac-1, Probable voltage-dependent anion-selective channel, [RH, Score=166, Expect=5e-50]} {Smed: dd_Smed_v6_2119_0_1, dd_Smed_v6_2119_0_1, [RH, Score=200, Expect=5e-63]} {RNA1509_202} {RNA1310_17976.1} {RNA815_4359.1} |
| 6. | MligTC455_44806 | 3661 | 76.27 | Mlig455_028184 | Neo: - Age: logFC(26M/2M)=0.297 |
WDR1 | 0.96 | - | - | - | 0.960 | - | - | Mlig455_028184 {REF} {Length: 2588} {Pfam: WD domain, G-beta repeat [PF00400.34, score=150.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=88.2]; WD40 region of Ge1, enhancer of mRNA-decapping protein [PF16529.7, score=19.8]} {Human: ENSG00000071127, WDR1, WD repeat domain 1, [RH, Score=509, Expect=1e-174]} {Mouse: ENSMUSG00000005103, Wdr1, WD repeat domain 1, [RH, Score=503, Expect=4e-172]} {Dmel: FBgn0260049, flr, flare, [RH, Score=592, Expect=0.0]} {Celegans: WBGene00006810, unc-78, Actin-interacting protein 1, [RH, Score=480, Expect=3e-163]} {Smed: dd_Smed_v6_1739_0_1, dd_Smed_v6_1739_0_1, [RH, Score=546, Expect=0.0]} {RNA1509_12542, RNA1509_1371} {RNA1310_8575, RNA1509_12542} {RNA1509_12542, RNA815_2757} |
| 7. | MligTC455_39875 | 868 | 18.08 | Mlig455_029063 | Neo: Neoblast Age: - Regeneration-enriched TP: 2.429 |
EFTUD2 | 0.952 | - | - | - | - | 0.952 | - | Mlig455_029063 {REF} {Length: 3992} {TRANSSPLICED} {Pfam: Elongation factor Tu GTP binding domain [PF00009.29, score=123.8]; 116 kDa U5 small nuclear ribonucleoprotein component N-terminus [PF16004.7, score=123.1]; Elongation factor G, domain IV [PF03764.20, score=81.4]; Elongation factor G C-terminus [PF00679.26, score=74.7]; Elongation factor Tu domain 2 [PF03144.27, score=43.2]; Elongation Factor G, domain III [PF14492.8, score=26.8]} {Human: ENSG00000108883, EFTUD2, elongation factor Tu GTP binding domain containing 2, [RH, Score=1239, Expect=0.0]} {Mouse: ENSMUSG00000020929, Eftud2, elongation factor Tu GTP binding domain containing 2, [RH, Score=1242, Expect=0.0]} {Dmel: FBgn0039566, CG4849, [RH, Score=1254, Expect=0.0]} {Celegans: WBGene00001166, eftu-2, Elongation Factor TU family, [RH, Score=1177, Expect=0.0]} {Smed: dd_Smed_v6_4747_0_1, dd_Smed_v6_4747_0_1, [RH, Score=1150, Expect=0.0]} {RNA1509_10297, RNA1509_19976, RNA1509_22570, RNA1509_40296, RNA1509_41816, RNA1509_44946, RNA1509_54163} {RNA1310_4304, RNA1509_10297, RNA1509_19976, RNA1509_22570, RNA1509_40296, RNA1509_41816, RNA1509_44946, RNA1509_54163} {RNA1509_10297, RNA1509_19976, RNA1509_22570, RNA1509_40296, RNA1509_41816, RNA1509_44946, RNA1509_54163, RNA815_1185} |
| 8. | MligTC455_36833 | 3066 | 63.87 | Mlig455_051663 | Neo: - Age: - |
RNASEK | 0.95 | - | - | - | - | 0.950 | - | Mlig455_051663 {REF} {Length: 1148} {TRANSSPLICED} {Human: ENSG00000219200, RNASEK, ribonuclease K, [RH, Score=79.7, Expect=5e-20]} {Mouse: ENSMUSG00000040904, Gm21988, predicted gene 21988, [RH, Score=79.0, Expect=2e-20]; ENSMUSG00000093989, Rnasek, ribonuclease, RNase K, [RH, Score=79.0, Expect=2e-20]} {Dmel: FBgn0262116, RNASEK, Ribonuclease kappa, [RH, Score=72.4, Expect=6e-18]} {Celegans: WBGene00009881, F49C12.12, [Score=64.7, Expect=4e-15]} {Smed: dd_Smed_v6_1020_0_1, dd_Smed_v6_1020_0_1, [RH, Score=96.7, Expect=9e-28]} {RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1310_30609, RNA1509_14152, RNA1509_18600, RNA1509_21585} {RNA1509_14152, RNA1509_18600, RNA1509_21585, RNA815_13737.1} |
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