TomoSeq data search

Data search

Results for MligTC455_30327

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30327

74

1.55

Mlig455_029571

Neo: -

Age: Down-Down-Down, logFC(26M/2M)=-0.854

TRAF5

Mlig455_029571 {REF} {Length: 3049} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.6]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=167, Expect=2e-44]} {Mouse: ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=159, Expect=4e-42]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=159, Expect=4e-42]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=61.6, Expect=8e-10]} {Smed: dd_Smed_v6_1991_0_1, dd_Smed_v6_1991_0_1, [Score=140, Expect=3e-36]} {RNA1509_36404} {RNA1310_17613} {RNA815_4476.1}

Cumulative graph for MligTC455_30327

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-5.39	1.845	0.28162	0.93236
RegionR2	2.06	1.845	0.12253	0.43361
RegionR3	2.227	1.845	0.02378	0.26273
RegionR4	-0.245	1.845	0.92338	1.00000
RegionR5	-0.623	1.845	0.97041	1.00000
RegionR6	0.912	1.845	0.45281	1.00000
RegionR7	0.626	1.845	0.68230	1.00000
RegionR8	0.433	1.845	0.79665	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.846	1.845	0.99989	1.00000
RegenerationR2	-0.605	1.845	0.42512	0.83117
RegenerationR3	0.807	1.845	0.26873	0.70316
RegenerationR4	0.765	1.845	0.37515	0.79803
RegenerationR5	1.493	1.845	0.06666	0.40678
RegenerationR6	1.328	1.845	0.11025	0.40999
RegenerationBL	0.734	1.845	0.55415	0.91035
RegenerationTP	-2.15	1.845	0.34404	0.78700

Genes with expression patterns similar to MligTC455_30327

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30327	74	1.55	Mlig455_029571	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.854	TRAF5	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_029571 {REF} {Length: 3049} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.6]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=167, Expect=2e-44]} {Mouse: ENSMUSG00000111385, Traf5, TNF receptor-associated factor 5, [Score=159, Expect=4e-42]; ENSMUSG00000026637, Traf5, TNF receptor-associated factor 5, [Score=159, Expect=4e-42]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=61.6, Expect=8e-10]} {Smed: dd_Smed_v6_1991_0_1, dd_Smed_v6_1991_0_1, [Score=140, Expect=3e-36]} {RNA1509_36404} {RNA1310_17613} {RNA815_4476.1}
2.	MligTC455_51074	585	12.2	Mlig455_054379, Mlig455_054401	Neo: - Age: -		0.973	-	-	-	-	0.973	-	Mlig455_054379 {REF} {Length: 2291} {RNA1310_46059} {RNA815_34780} Mlig455_054401 {REF} {Length: 764} {RNA1310_46059} {RNA815_59068}
3.	MligTC455_37925	46	0.96	Mlig455_057476	Neo: - Age: logFC(26M/2M)=0.871	ARRDC3	0.972	-	-	-	0.972	-	-	Mlig455_057476 {REF} {Length: 2634} {Pfam: Arrestin (or S-antigen), N-terminal domain [PF00339.31, score=107.6]; Arrestin (or S-antigen), C-terminal domain [PF02752.24, score=77.1]; Rgp1 [PF08737.12, score=21.3]} {Human: ENSG00000113369, ARRDC3, arrestin domain containing 3, [Score=121, Expect=4e-30]; ENSG00000105643, ARRDC2, arrestin domain containing 2, [Score=115, Expect=4e-28]} {Mouse: ENSMUSG00000110906, Arrdc2, arrestin domain containing 2, [Score=124, Expect=2e-31]; ENSMUSG00000002910, Arrdc2, arrestin domain containing 2, [Score=124, Expect=2e-31]; ENSMUSG00000074794, Arrdc3, arrestin domain containing 3, [Score=121, Expect=3e-30]} {Dmel: FBgn0037465, CG1105, [Score=133, Expect=9e-35]} {Celegans: WBGene00012464, arrd-7, ARRestin Domain protein, [Score=123, Expect=3e-31]} {RNA1509_9323} {RNA1310_27846.1} {RNA815_29471}
4.	MligTC455_10598	46	0.97	Mlig455_030367	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.975	GRIK3	0.96	-	-	-	-	-	0.960	Mlig455_030367 {REF} {Length: 3072} {Pfam: Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=74.5]; Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=38.8]} {Human: ENSG00000163873, GRIK3, glutamate ionotropic receptor kainate type subunit 3, [Score=97.4, Expect=2e-20]; ENSG00000164418, GRIK2, glutamate ionotropic receptor kainate type subunit 2, [Score=93.2, Expect=5e-19]; ENSG00000171189, GRIK1, glutamate ionotropic receptor kainate type subunit 1, [Score=92.8, Expect=6e-19]} {Mouse: ENSMUSG00000001985, Grik3, glutamate receptor, ionotropic, kainate 3, [Score=97.1, Expect=2e-20]; ENSMUSG00000056073, Grik2, glutamate receptor, ionotropic, kainate 2 (beta 2), [Score=95.9, Expect=6e-20]} {Dmel: FBgn0039916, Ekar, Eye-enriched kainate receptor, [Score=90.1, Expect=2e-18]} {Celegans: WBGene00001613, glr-2, Glutamate receptor 2, [Score=88.2, Expect=8e-18]} {Smed: dd_Smed_v6_14655_0_1, dd_Smed_v6_14655_0_1, [Score=94.0, Expect=9e-20]} {RNA1509_59839} {RNA1310_4586} {RNA815_2154.1}
5.	MligTC455_15651	59	1.23	Mlig455_046263	Neo: - Age: -	DSTYK	0.952	-	-	-	-	0.952	-	Mlig455_046263 {REF} {Length: 4007} {Pfam: Protein kinase domain [PF00069.27, score=112.3]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=106.5]; Fungal protein kinase [PF17667.3, score=18.4]} {Human: ENSG00000133059, DSTYK, dual serine/threonine and tyrosine protein kinase, [Score=612, Expect=0.0]} {Mouse: ENSMUSG00000042046, Dstyk, dual serine/threonine and tyrosine protein kinase, [Score=606, Expect=0.0]} {Dmel: FBgn0259680, Pkcdelta, Protein kinase C delta, [Score=81.6, Expect=2e-15]} {Celegans: WBGene00006941, wnk-1, Serine/threonine-protein kinase WNK, [Score=78.6, Expect=1e-14]} {Smed: dd_Smed_v6_4436_0_1, dd_Smed_v6_4436_0_1, [Score=533, Expect=7e-176]} {RNA1509_51957} {RNA1310_22897} {RNA815_9862}
6.	MligTC455_13284	185	3.86	Mlig455_021567	Neo: - Age: -	TAF5L	0.951	-	-	-	0.951	-	-	Mlig455_021567 {REF} {Length: 5591} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=74.7]; WD domain, G-beta repeat [PF00400.34, score=74.6]; C2H2-type zinc finger [PF13894.8, score=57.6]; Zinc-finger double domain [PF13465.8, score=56.1]; Zinc-finger of C2H2 type [PF12874.9, score=31.9]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=31.4]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=25.3]; Zinc finger C2H2-type, 3 repeats [PF18868.3, score=22.3]; Zinc ribbon domain [PF09723.12, score=21.2]} {Human: ENSG00000135801, TAF5L, TATA-box binding protein associated factor 5 like, [Score=131, Expect=7e-31]; ENSG00000148835, TAF5, TATA-box binding protein associated factor 5, [Score=129, Expect=9e-30]} {Mouse: ENSMUSG00000038697, Taf5l, TATA-box binding protein associated factor 5 like, [Score=130, Expect=1e-30]; ENSMUSG00000025049, Taf5, TATA-box binding protein associated factor 5, [Score=129, Expect=6e-30]} {Dmel: FBgn0010356, Taf5, TBP-associated factor 5, [Score=108, Expect=7e-24]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=94.4, Expect=2e-21]} {Smed: dd_Smed_v6_26394_0_1, dd_Smed_v6_26394_0_1, [Score=99.0, Expect=6e-23]} {RNA1509_13332} {RNA1310_4578, RNA1509_13332} {RNA1509_13332, RNA815_8751}

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