TomoSeq data search

Data search

Results for MligTC455_30438

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_30438

329

6.86

Mlig455_004548

Neo: -

Age: logFC(26M/2M)=0.624

UPP1

Mlig455_004548 {REF} {Length: 1758} {Pfam: Phosphorylase superfamily [PF01048.22, score=98.6]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=264, Expect=6e-87]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=258, Expect=9e-85]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=268, Expect=7e-89]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0039464, CG6330, [RH, Score=263, Expect=2e-86]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=204, Expect=3e-64]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=200, Expect=1e-62]} {RNA1509_11745} {RNA1310_17721} {RNA815_2064.1}

Cumulative graph for MligTC455_30438

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-0.851	3.155	0.56403	1.00000
RegionR2	0.547	3.155	0.32120	0.71284
RegionR3	0.588	3.155	0.15900	0.67477
RegionR4	-0.178	3.155	0.73818	1.00000
RegionR5	-0.452	3.155	0.29987	0.63517
RegionR6	-0.081	3.155	0.86722	1.00000
RegionR7	-0.288	3.155	0.65769	1.00000
RegionR8	0.716	3.155	0.28572	0.91294

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-5.436	3.155	0.31135	1.00000
RegenerationR2	-0.126	3.155	0.75906	0.97624
RegenerationR3	0.081	3.155	0.86290	1.00000
RegenerationR4	-0.236	3.155	0.64167	0.92834
RegenerationR5	-0.223	3.155	0.63908	0.92650
RegenerationR6	-0.232	3.155	0.66977	0.90847
RegenerationBL	0.252	3.155	0.68399	1.00000
RegenerationTP	-0.218	3.155	0.75084	1.00000

Genes with expression patterns similar to MligTC455_30438

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30438	329	6.86	Mlig455_004548	Neo: - Age: logFC(26M/2M)=0.624	UPP1	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_004548 {REF} {Length: 1758} {Pfam: Phosphorylase superfamily [PF01048.22, score=98.6]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=264, Expect=6e-87]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=258, Expect=9e-85]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=268, Expect=7e-89]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0039464, CG6330, [RH, Score=263, Expect=2e-86]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=204, Expect=3e-64]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=200, Expect=1e-62]} {RNA1509_11745} {RNA1310_17721} {RNA815_2064.1}
2.	MligTC455_43410	203	4.22	Mlig455_057515	Neo: - Age: logFC(26M/2M)=-0.214	TRAF5	1.71	-	0.751	-	-	-	0.959	Mlig455_057515 {REF} {Length: 2170} {TRANSSPLICED} {Pfam: TRAF-type zinc finger [PF02176.20, score=45.7]; Seven in absentia protein family [PF03145.18, score=25.7]} {Human: ENSG00000082512, TRAF5, TNF receptor associated factor 5, [Score=197, Expect=7e-55]} {Mouse: ENSMUSG00000021277, Traf3, TNF receptor-associated factor 3, [Score=173, Expect=2e-46]} {Dmel: FBgn0026319, Traf4, TNF-receptor-associated factor 4, [Score=96.7, Expect=6e-21]} {Celegans: WBGene00006612, trf-1, TNF Receptor Associated Factor (TRAF) homolog; TRF-1, [Score=95.5, Expect=1e-20]} {Smed: dd_Smed_v6_10424_0_1, dd_Smed_v6_10424_0_1, [Score=109, Expect=2e-25]} {RNA1509_32223} {RNA1310_24731} {RNA815_3096.1}
3.	MligTC455_45196	415	8.66	Mlig455_012327	Neo: - Age: logFC(26M/2M)=-0.373	INVS	1.696	-	-	0.740	0.956	-	-	Mlig455_012327 {REF} {Length: 3620} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=130.7]; Ankyrin repeats (many copies) [PF13637.8, score=103.5]; Ankyrin repeats (many copies) [PF13857.8, score=90.3]; Ankyrin repeat [PF13606.8, score=74.3]; Ankyrin repeat [PF00023.32, score=60.1]} {Human: ENSG00000119509, INVS, inversin, [Score=114, Expect=3e-25]; ENSG00000065413, ANKRD44, ankyrin repeat domain 44, [Score=111, Expect=9e-25]; ENSG00000139645, ANKRD52, ankyrin repeat domain 52, [Score=110, Expect=6e-24]} {Mouse: ENSMUSG00000014498, Ankrd52, ankyrin repeat domain 52, [Score=107, Expect=3e-23]; ENSMUSG00000052331, Ankrd44, ankyrin repeat domain 44, [Score=107, Expect=2e-23]; ENSMUSG00000069601, Ank3, ankyrin 3, epithelial, [Score=104, Expect=4e-22]; ENSMUSG00000014496, Ankrd28, ankyrin repeat domain 28, [Score=103, Expect=5e-22]; ENSMUSG00000032826, Ank2, ankyrin 2, brain, [Score=102, Expect=2e-21]} {Dmel: FBgn0260487, CG42534, [Score=112, Expect=6e-25]} {Celegans: WBGene00021304, nphp-2, NePHronoPhthisis (Human kidney disease) homolog, [Score=99.0, Expect=5e-21]} {Smed: dd_Smed_v6_16174_0_1, dd_Smed_v6_16174_0_1, [Score=115, Expect=3e-26]} {RNA1509_13535, RNA1509_36786} {RNA1310_5307.1, RNA1509_36786} {RNA1509_36786, RNA815_942}
4.	MligTC455_14230	108	2.26	Mlig455_021000	Neo: - Age: -		0.976	-	-	-	-	-	0.976	Mlig455_021000 {REF} {Length: 1760} {NoTransDecoderORF} {RNA1509_57497} {RNA1310_4374.2} {RNA815_1234.1}
5.	MligTC455_38972	202	4.21	Mlig455_002639, Mlig455_011248, Mlig455_047800	Neo: - Age: -		0.976	-	-	-	-	-	0.976	Mlig455_002639 {REF} {Length: 229} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_56058} {RNA815_36932.1} Mlig455_011248 {REF} {Length: 200} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.2} {RNA815_36932.1} Mlig455_047800 {REF} {Length: 1142} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_57981} {RNA815_36932.1}
6.	MligTC455_38853	175	3.65	Mlig455_023629, Mlig455_057448	Neo: - Age: Up-Down-Down		0.972	-	-	-	-	-	0.972	Mlig455_023629 {REF} {Length: 364} {NoTransDecoderORF} {RNA1509_49659} {RNA1310_123644} Mlig455_057448 {REF} {Length: 4350} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_57922} {RNA1310_17737.1} {RNA815_11419.1}
7.	MligTC455_31602	208	4.33	Mlig455_031241, Mlig455_031248	Neo: - Age: -		0.969	-	-	-	-	-	0.969	Mlig455_031241 {REF} {Length: 1588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36986} {RNA1310_4605} {RNA815_16115.1} Mlig455_031248 {REF} {Length: 2570} {TRANSSPLICED} {RNA1509_36986} {RNA1310_45653} {RNA815_16115.2}
8.	MligTC455_38236	44	0.91	Mlig455_069041, Mlig455_070137	Neo: - Age: logFC(26M/2M)=-0.942		0.965	-	-	-	-	-	0.965	Mlig455_069041 {REF} {Length: 2588} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_25455} {RNA815_14978} Mlig455_070137 {REF} {Length: 1380} {RNA1509_26128} {RNA1310_7005.2} {RNA815_23435}
9.	MligTC455_31871	31	0.65	Mlig455_010813	Neo: - Age: -		0.963	-	-	-	-	-	0.963	Mlig455_010813 {REF} {Length: 2512} {NoTransDecoderORF} {RNA1509_46587} {RNA1310_48408.1} {RNA815_22207.1}
10.	MligTC455_40988	23	0.47	Mlig455_059710	Neo: - Age: logFC(26M/2M)=-0.303 Regeneration-upregulated BL: 7.882 Regeneration-enriched BL: 7.882	TOGARAM1	0.961	-	-	-	-	-	0.961	Mlig455_059710 {REF} {Length: 2947} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=40.6]; Parkin co-regulated protein [PF10274.11, score=29.4]; CLASP N terminal [PF12348.10, score=28.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=28.2]; HEAT repeat [PF02985.24, score=23.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=20.5]} {Human: ENSG00000198718, TOGARAM1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=3e-73]} {Mouse: ENSMUSG00000035614, Togaram1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=9e-76]} {Dmel: FBgn0259818, CG42399, [Score=69.3, Expect=1e-11]} {Celegans: WBGene00000491, che-12, Crescerin-like protein che-12, [Score=165, Expect=1e-41]} {Smed: dd_Smed_v6_13421_0_1, dd_Smed_v6_13421_0_1, [Score=164, Expect=3e-41]} {RNA1509_8070} {RNA1310_5990, RNA1509_8070} {RNA1509_8070, RNA815_11508}
11.	MligTC455_31325	78	1.62	Mlig455_026709, Mlig455_044580, Mlig455_050736, Mlig455_050745	Neo: - Age: -		0.958	-	-	-	-	-	0.958	Mlig455_026709 {REF} {Length: 5107} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=119.6]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.1]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.1, Expect=2e-12]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1} Mlig455_044580 {REF} {Length: 2183} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=80.6]} {RNA1509_47056} {RNA1310_3828} {RNA815_6291.1} Mlig455_050736 {REF} {Length: 1564} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609} Mlig455_050745 {REF} {Length: 1565} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=121.6]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=65.9, Expect=7e-13]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_15609}
12.	MligTC455_42890	236	4.91	Mlig455_022504	Neo: - Age: logFC(26M/2M)=-0.269 Region-enriched R4: 2.592/0.03886	NOTCH1	0.958	-	-	-	-	-	0.958	Mlig455_022504 {REF} {Length: 3820} {Pfam: Calcium-binding EGF domain [PF07645.17, score=77.2]; EGF-like domain [PF00008.29, score=65.8]; Delta serrate ligand [PF01414.21, score=41.8]; Human growth factor-like EGF [PF12661.9, score=38.5]; EGF-like domain [PF07974.15, score=26.9]; EGF domain [PF12947.9, score=23.0]} {Human: ENSG00000148400, NOTCH1, notch 1, [Score=134, Expect=6e-32]; ENSG00000165124, SVEP1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=132, Expect=2e-31]} {Mouse: ENSMUSG00000026923, Notch1, notch 1, [Score=130, Expect=5e-31]; ENSMUSG00000014773, Dll1, delta like canonical Notch ligand 1, [Score=129, Expect=6e-31]; ENSMUSG00000036766, Dner, delta/notch-like EGF repeat containing, [Score=127, Expect=3e-30]; ENSMUSG00000028369, Svep1, sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1, [Score=126, Expect=1e-29]; ENSMUSG00000027878, Notch2, notch 2, [Score=125, Expect=3e-29]} {Dmel: FBgn0004647, N, Notch, [Score=134, Expect=3e-32]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=119, Expect=2e-27]} {Smed: dd_Smed_v6_7067_0_1, dd_Smed_v6_7067_0_1, [Score=119, Expect=7e-28]} {RNA1509_36279} {RNA1310_12661} {RNA815_3995.1}
13.	MligTC455_29638	106	2.21	Mlig455_018397, Mlig455_069530	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.617		0.956	-	-	-	-	-	0.956	Mlig455_018397 {REF} {Length: 5881} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=52.2]} {Celegans: WBGene00007723, C25F9.2, [Score=171, Expect=1e-43]} {RNA1509_4648} {RNA1310_3427} {RNA815_694.1} Mlig455_069530 {REF} {Length: 5201} {Pfam: DNA polymerase type B, organellar and viral [PF03175.15, score=144.0]} {Celegans: WBGene00007723, C25F9.2, [Score=345, Expect=2e-99]} {RNA1509_4648} {RNA1310_2280.1} {RNA815_694.2}
14.	MligTC455_31559	231	4.82	Mlig455_011939, Mlig455_020259, Mlig455_022799, Mlig455_041844, Mlig455_046648, Mlig455_050612, Mlig455_057132, Mlig455_064270	Neo: - Age: -		0.956	-	-	-	-	-	0.956	Mlig455_011939 {REF} {Length: 3372} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_59214} {RNA1310_36395} {RNA815_11419.1} Mlig455_020259 {REF} {Length: 1605} {NoTransDecoderORF} {RNA1509_39017} {RNA1310_36395} {RNA815_11419.1} Mlig455_022799 {REF} {Length: 2181} {NoTransDecoderORF} {RNA1509_39017} {RNA1310_36395} {RNA815_11419.1} Mlig455_041844 {REF} {Length: 2195} {NoTransDecoderORF} {RNA1509_39017} {RNA1310_36395} {RNA815_11419.1} Mlig455_046648 {REF} {Length: 845} {NoTransDecoderORF} {RNA1509_33712} {RNA1310_32764} {RNA815_11419.1} Mlig455_050612 {REF} {Length: 897} {NoTransDecoderORF} {RNA1509_33712} {RNA1310_32764} {RNA815_11419.1} Mlig455_057132 {REF} {Length: 905} {NoTransDecoderORF} {RNA1509_33712, RNA1509_56706} {RNA1310_32764, RNA1509_56706} {RNA1509_56706, RNA815_11419.1} Mlig455_064270 {REF} {Length: 1052} {NoTransDecoderORF} {RNA1509_33712} {RNA1310_32764} {RNA815_11419.1}
15.	MligTC455_17596	37	0.77	Mlig455_007172	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_007172 {REF} {Length: 1102} {RNA1509_49095} {RNA1310_50088} {RNA815_56889.1}
16.	MligTC455_16155	68	1.41	Mlig455_036156	Neo: - Age: -		0.952	-	-	-	-	-	0.952	Mlig455_036156 {REF} {Length: 824} {NoTransDecoderORF} {RNA1509_16255} {RNA1310_42433.1} {RNA815_22226}
17.	MligTC455_27741	387	8.07	Mlig455_020707, Mlig455_020775	Neo: Irradiation Age: Down-Up-Down	GEN1	0.952	-	-	-	-	-	0.952	Mlig455_020707 {REF} {Length: 3335} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=76.2]; XPG N-terminal domain [PF00752.19, score=58.9]; Cornifin (SPRR) family [PF02389.17, score=26.4]} {Human: ENSG00000178295, GEN1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=214, Expect=1e-58]} {Mouse: ENSMUSG00000051235, Gen1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=214, Expect=2e-58]} {Dmel: FBgn0263831, Gen, XPG-like endonuclease, [RH, Score=177, Expect=9e-47]} {Celegans: WBGene00000794, crn-1, Flap endonuclease 1, [Score=95.9, Expect=6e-21]} {Smed: dd_Smed_v6_8206_0_1, dd_Smed_v6_8206_0_1, [Score=104, Expect=5e-24]} {RNA1509_33403} {RNA1310_7248.1, RNA1509_33403} {RNA1509_33403, RNA815_24301} Mlig455_020775 {REF} {Length: 3049} {TRANSSPLICED} {Pfam: XPG I-region [PF00867.20, score=76.2]; XPG N-terminal domain [PF00752.19, score=58.2]; Cornifin (SPRR) family [PF02389.17, score=26.4]} {Human: ENSG00000178295, GEN1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=214, Expect=2e-58]} {Mouse: ENSMUSG00000051235, Gen1, GEN1, Holliday junction 5' flap endonuclease, [RH, Score=213, Expect=3e-58]} {Dmel: FBgn0263831, Gen, XPG-like endonuclease, [RH, Score=176, Expect=2e-46]} {Celegans: WBGene00000794, crn-1, Flap endonuclease 1, [Score=95.1, Expect=9e-21]} {Smed: dd_Smed_v6_8206_0_1, dd_Smed_v6_8206_0_1, [Score=103, Expect=7e-24]} {RNA1509_33403} {RNA1310_7248.1} {RNA815_24301}
18.	MligTC455_39058	37	0.77	Mlig455_039326	Neo: - Age: -		0.951	-	-	-	-	-	0.951	Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}

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