M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_38236

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_38236 44 0.91 Mlig455_069041, Mlig455_070137

Neo: -

Age: logFC(26M/2M)=-0.942

Mlig455_069041 {REF} {Length: 2588} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_25455} {RNA815_14978}

Mlig455_070137 {REF} {Length: 1380} {RNA1509_26128} {RNA1310_7005.2} {RNA815_23435}

Cumulative graph for MligTC455_38236

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.944 1.122 1.00000 1.00000
RegionR2 0.58 1.122 0.60602 0.95509
RegionR3 1.001 1.122 0.52919 1.00000
RegionR4 3.418 1.122 0.04525 0.18032
RegionR5 2.649 1.122 0.08480 0.27258
RegionR6 -0.4 1.122 0.89698 1.00000
RegionR7 -1.879 1.122 1.00000 1.00000
RegionR8 -1.425 1.122 1.00000 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 0.622 1.122 1.00000 1.00000
RegenerationR2 0.301 1.122 0.76139 0.97707
RegenerationR3 0.931 1.122 0.44697 0.83056
RegenerationR4 -0.563 1.122 0.68112 0.94607
RegenerationR5 0.41 1.122 0.72039 0.95957
RegenerationR6 1.645 1.122 0.34405 0.68941
RegenerationBL 2.355 1.122 0.26644 0.62524
RegenerationTP 3.091 1.122 0.27447 0.72267


Genes with expression patterns similar to MligTC455_38236

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_38236 44 0.91 Mlig455_069041, Mlig455_070137

Neo: -

Age: logFC(26M/2M)=-0.942

 4 - - 1.000 1.000 1.000 1.000

Mlig455_069041 {REF} {Length: 2588} {NoTransDecoderORF} {RNA1509_22928} {RNA1310_25455} {RNA815_14978}

Mlig455_070137 {REF} {Length: 1380} {RNA1509_26128} {RNA1310_7005.2} {RNA815_23435}
2. MligTC455_29937 75 1.55 Mlig455_053384

Neo: -

Age: -

 2.421 - - 0.745 - 0.725 0.951 Mlig455_053384 {REF} {Length: 3610} {NoTransDecoderORF} {RNA1509_57191} {RNA1310_45092} {RNA815_10095.1}
3. MligTC455_38608 87 1.8 Mlig455_035941

Neo: -

Age: -

 1.84 - - 0.881 - - 0.959 Mlig455_035941 {REF} {Length: 2109} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=161.7]; Endonuclease-reverse transcriptase [PF14529.8, score=51.0]; RNase H [PF00075.26, score=49.2]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=27.2]; zinc-binding in reverse transcriptase [PF13966.8, score=20.0]} {Celegans: WBGene00022888, rnh-1.1, RNase H, [Score=55.1, Expect=2e-07]} {Smed: dd_Smed_v6_13734_0_18, dd_Smed_v6_13734_0_18, [Score=73.2, Expect=3e-13]} {RNA1509_42121} {RNA1310_28357.1} {RNA815_28165.2}
4. MligTC455_22180 88 1.84 Mlig455_006898

Neo: -

Age: -

 1.733 - - - 0.768 - 0.965 Mlig455_006898 {REF} {Length: 5800} {RNA1509_12420} {RNA1310_87510} {RNA815_50698}
5. MligTC455_11182 44 0.92 Mlig455_029840

Neo: -

Age: -

 0.982 - - - - - 0.982 Mlig455_029840 {REF} {Length: 446} {NoTransDecoderORF} {RNA1310_43812}
6. MligTC455_51628 96 2.01 Mlig455_004880, Mlig455_047262

Neo: -

Age: -

Region-enriched R2: 7.137/0.00371

 0.982 - - - - - 0.982

Mlig455_004880 {REF} {Length: 548} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}

Mlig455_047262 {REF} {Length: 610} {NoTransDecoderORF} {RNA1509_56822} {RNA1310_75098} {RNA815_1171.1}
7. MligTC455_39858 79 1.66 Mlig455_038520

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=2.278

 NECAB1 0.98 - - - - - 0.980 Mlig455_038520 {REF} {Length: 1812} {Pfam: EF-hand domain [PF13405.8, score=35.3]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.7]; EF-hand domain pair [PF13833.8, score=27.4]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=26.7]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=187, Expect=2e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=181, Expect=2e-53]} {RNA1310_5770} {RNA815_27367}
8. MligTC455_27080 48 1 Mlig455_061810

Neo: -

Age: -

 0.979 - - - - - 0.979 Mlig455_061810 {REF} {Length: 665} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
9. MligTC455_27063 74 1.54 Mlig455_019209

Neo: -

Age: -

 0.977 - - - - - 0.977 Mlig455_019209 {REF} {Length: 481} {NoTransDecoderORF} {RNA1509_44223} {RNA1310_99471} {RNA815_64986}
10. MligTC455_09042 16 0.33 Mlig455_039319

Neo: -

Age: -

 0.975 - - - - - 0.975 Mlig455_039319 {REF} {Length: 322} {NoTransDecoderORF} {RNA1310_105283} {RNA815_12207.1}
11. MligTC455_28278 110 2.28 Mlig455_018484

Neo: -

Age: -

 0.975 - - - - - 0.975 Mlig455_018484 {REF} {Length: 1124} {NoTransDecoderORF} {RNA1509_35077} {RNA1310_17510.1} {RNA815_9674}
12. MligTC455_23074 38 0.79 Mlig455_020751, Mlig455_036068

Neo: Irradiation

Age: Up-Down-Down

 0.974 - - - - - 0.974

Mlig455_020751 {REF} {Length: 927} {NoTransDecoderORF} {RNA1509_53615} {RNA1310_53616} {RNA815_33827}

Mlig455_036068 {REF} {Length: 1090} {NoTransDecoderORF} {RNA1509_53615} {RNA1310_77453} {RNA815_33827}
13. MligTC455_34858 27 0.57 Mlig455_064094

Neo: -

Age: Up-Down-Down, logFC(26M/2M)=-0.290

 DPYD 0.971 - - - - - 0.971 Mlig455_064094 {REF} {Length: 5732} {Pfam: Conserved region in glutamate synthase [PF01645.19, score=504.5]; Glutamate synthase central domain [PF04898.16, score=353.2]; GXGXG motif [PF01493.21, score=249.1]; Glutamine amidotransferases class-II [PF00310.23, score=203.2]; Dihydroprymidine dehydrogenase domain II, 4Fe-4S cluster [PF14691.8, score=67.6]; Pyridine nucleotide-disulphide oxidoreductase [PF07992.16, score=54.9]; NAD(P)-binding Rossmann-like domain [PF13450.8, score=32.7]; Pyridine nucleotide-disulphide oxidoreductase [PF00070.29, score=27.4]; FAD dependent oxidoreductase [PF01266.26, score=23.4]; HI0933-like protein [PF03486.16, score=22.3]; Thi4 family [PF01946.19, score=22.1]; Pyridine nucleotide-disulphide oxidoreductase [PF13738.8, score=21.9]} {Human: ENSG00000188641, DPYD, dihydropyrimidine dehydrogenase, [Score=87.8, Expect=1e-16]} {Mouse: ENSMUSG00000033308, Dpyd, dihydropyrimidine dehydrogenase, [Score=86.3, Expect=3e-16]} {Dmel: FBgn0036663, CG9674, [Score=1686, Expect=0.0]} {Celegans: WBGene00012326, W07E11.1, [Score=1832, Expect=0.0]} {Smed: dd_Smed_v6_5074_0_1, dd_Smed_v6_5074_0_1, [Score=1622, Expect=0.0]} {RNA1509_10634, RNA1509_223, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1310_1077.1, RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495} {RNA1509_10634, RNA1509_24006, RNA1509_27165, RNA1509_43122, RNA1509_45495, RNA815_141.1}
14. MligTC455_49969 23 0.48 Mlig455_006042

Neo: -

Age: -

 0.971 - - - - - 0.971 Mlig455_006042 {REF} {Length: 2204} {Pfam: F5/8 type C domain [PF00754.27, score=21.8]} {RNA1509_25922} {RNA1310_32867} {RNA815_55792}
15. MligTC455_14517 21 0.45 Mlig455_071167

Neo: -

Age: -

 0.97 - - - - - 0.970 Mlig455_071167 {REF} {Length: 785} {NoTransDecoderORF} {RNA1310_122612}
16. MligTC455_41374 23 0.49 Mlig455_008163

Neo: -

Age: -

 0.969 - - - - - 0.969 Mlig455_008163 {REF} {Length: 715} {RNA1310_116941}
17. MligTC455_03577 21 0.44 Mlig455_018916

Neo: -

Age: -

 0.966 - - - - - 0.966 Mlig455_018916 {REF} {Length: 741} {RNA1509_13929} {RNA1310_62638.1} {RNA815_9101.2}
18. MligTC455_17947 64 1.34 Mlig455_042563

Neo: -

Age: -

Region-enriched R2: 7.054/0.00113

 ASCL5 0.965 - - - - - 0.965 Mlig455_042563 {REF} {Length: 1821} {Pfam: Helix-loop-helix DNA-binding domain [PF00010.28, score=52.5]} {Human: ENSG00000232237, ASCL5, achaete-scute family bHLH transcription factor 5, [Score=84.7, Expect=6e-20]} {Mouse: ENSMUSG00000097918, Ascl5, achaete-scute family bHLH transcription factor 5, [Score=84.0, Expect=5e-20]} {Dmel: FBgn0002922, nau, nautilus, [Score=49.3, Expect=6e-07]} {Celegans: WBGene00001952, hlh-6, Helix-loop-helix protein 6, [RH, Score=90.9, Expect=4e-22]} {Smed: dd_Smed_v6_14753_0_1, dd_Smed_v6_14753_0_1, [RH, Score=76.6, Expect=2e-17]} {RNA1310_71187}
19. MligTC455_30438 329 6.86 Mlig455_004548

Neo: -

Age: logFC(26M/2M)=0.624

 UPP1 0.965 - - - - - 0.965 Mlig455_004548 {REF} {Length: 1758} {Pfam: Phosphorylase superfamily [PF01048.22, score=98.6]} {Human: ENSG00000183696, UPP1, uridine phosphorylase 1, [RH, Score=264, Expect=6e-87]; ENSG00000007001, UPP2, uridine phosphorylase 2, [RH, Score=258, Expect=9e-85]} {Mouse: ENSMUSG00000020407, Upp1, uridine phosphorylase 1, [RH, Score=268, Expect=7e-89]; ENSMUSG00000026839, Upp2, uridine phosphorylase 2, [RH, Score=259, Expect=2e-85]} {Dmel: FBgn0039464, CG6330, [RH, Score=263, Expect=2e-86]} {Celegans: WBGene00022817, upp-1, Uridine and thymidine phosphorylase, [RH, Score=204, Expect=3e-64]} {Smed: dd_Smed_v6_9107_0_1, dd_Smed_v6_9107_0_1, [RH, Score=200, Expect=1e-62]} {RNA1509_11745} {RNA1310_17721} {RNA815_2064.1}
20. MligTC455_40988 23 0.47 Mlig455_059710

Neo: -

Age: logFC(26M/2M)=-0.303

Regeneration-upregulated BL: 7.882

Regeneration-enriched BL: 7.882

 TOGARAM1 0.965 - - - - - 0.965 Mlig455_059710 {REF} {Length: 2947} {TRANSSPLICED} {Pfam: HEAT repeats [PF13646.8, score=40.6]; Parkin co-regulated protein [PF10274.11, score=29.4]; CLASP N terminal [PF12348.10, score=28.6]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=28.2]; HEAT repeat [PF02985.24, score=23.1]; Vacuolar 14 Fab1-binding region [PF12755.9, score=20.5]} {Human: ENSG00000198718, TOGARAM1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=3e-73]} {Mouse: ENSMUSG00000035614, Togaram1, TOG array regulator of axonemal microtubules 1, [RH, Score=261, Expect=9e-76]} {Dmel: FBgn0259818, CG42399, [Score=69.3, Expect=1e-11]} {Celegans: WBGene00000491, che-12, Crescerin-like protein che-12, [Score=165, Expect=1e-41]} {Smed: dd_Smed_v6_13421_0_1, dd_Smed_v6_13421_0_1, [Score=164, Expect=3e-41]} {RNA1509_8070} {RNA1310_5990, RNA1509_8070} {RNA1509_8070, RNA815_11508}
21. MligTC455_28242 66 1.38 Mlig455_041773

Neo: -

Age: -

 0.964 - - - - - 0.964 Mlig455_041773 {REF} {Length: 2818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=22.0]} {RNA1509_49686} {RNA1310_5450.1} {RNA815_16253.2}
22. MligTC455_40287 116 2.41 Mlig455_043891

Neo: -

Age: logFC(26M/2M)=-0.916

Regeneration-enriched BL: 6.689
Regeneration-enriched R2: 6.021

 0.963 - - - - - 0.963 Mlig455_043891 {REF} {Length: 4345} {RNA1509_22214} {RNA1310_39071, RNA1509_22214} {RNA1509_22214, RNA815_41273}
23. MligTC455_14045 44 0.93 Mlig455_014678

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_014678 {REF} {Length: 1127} {RNA1509_32807} {RNA1310_50499} {RNA815_11759.1}
24. MligTC455_28329 89 1.86 Mlig455_031656

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_031656 {REF} {Length: 3392} {Pfam: Integrase core domain [PF00665.28, score=30.9]} {Smed: dd_Smed_v6_11155_0_5, dd_Smed_v6_11155_0_5, [Score=63.5, Expect=9e-13]} {RNA1509_21400} {RNA1310_576.1} {RNA815_2733.1}
25. MligTC455_31602 208 4.33 Mlig455_031241, Mlig455_031248

Neo: -

Age: -

 0.962 - - - - - 0.962

Mlig455_031241 {REF} {Length: 1588} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_36986} {RNA1310_4605} {RNA815_16115.1}

Mlig455_031248 {REF} {Length: 2570} {TRANSSPLICED} {RNA1509_36986} {RNA1310_45653} {RNA815_16115.2}
26. MligTC455_39058 37 0.77 Mlig455_039326

Neo: -

Age: -

 0.962 - - - - - 0.962 Mlig455_039326 {REF} {Length: 1252} {NoTransDecoderORF} {RNA1310_104321}
27. MligTC455_08728 78 1.63 Mlig455_048047, Mlig455_048066

Neo: -

Age: -

 0.961 - - - - - 0.961

Mlig455_048047 {REF} {Length: 979} {NoTransDecoderORF}

Mlig455_048066 {REF} {Length: 704} {NoTransDecoderORF}
28. MligTC455_15614 15 0.32 Mlig455_070339

Neo: -

Age: -

 0.961 - - - - - 0.961 Mlig455_070339 {REF} {Length: 1010} {RNA1509_45592} {RNA1310_123432} {RNA815_27368}
29. MligTC455_45055 25 0.52 Mlig455_068371

Neo: -

Age: Down-Down-Up

 UBL3 0.961 - - - - - 0.961 Mlig455_068371 {REF} {Length: 1666} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF13881.8, score=89.3]} {Human: ENSG00000122042, UBL3, ubiquitin like 3, [Score=133, Expect=4e-41]} {Mouse: ENSMUSG00000001687, Ubl3, ubiquitin-like 3, [Score=133, Expect=4e-41]} {Dmel: FBgn0026076, UBL3, Ubiquitin like 3, [Score=129, Expect=5e-37]} {Celegans: WBGene00008121, C46F11.6, Ubiquitin-like protein, [RH, Score=113, Expect=2e-33]} {Smed: dd_Smed_v6_10574_0_1, dd_Smed_v6_10574_0_1, [Score=99.8, Expect=2e-28]} {RNA1509_18224} {RNA1310_51551, RNA1509_18224} {RNA1509_18224, RNA815_23727}
30. MligTC455_48213 164 3.41 Mlig455_056285, Mlig455_056310

Neo: -

Age: -

Region-enriched R2: 5.079/0.00142

 0.961 - - - - - 0.961

Mlig455_056285 {REF} {Length: 2259} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}

Mlig455_056310 {REF} {Length: 1953} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=140.9]} {Smed: dd_Smed_v6_22997_0_1, dd_Smed_v6_22997_0_1, [Score=85.1, Expect=2e-17]} {RNA1310_14535} {RNA815_31041}
31. MligTC455_01552 71 1.47 Mlig455_038980

Neo: -

Age: -

 0.959 - - - - - 0.959 Mlig455_038980 {REF} {Length: 991}
32. MligTC455_23080 199 4.15 Mlig455_011733

Neo: -

Age: logFC(26M/2M)=-0.537

 CUBN 0.959 - - - - - 0.959 Mlig455_011733 {REF} {Length: 1824} {Pfam: EGF-like domain [PF00008.29, score=38.3]; Human growth factor-like EGF [PF12661.9, score=21.2]} {Human: ENSG00000107611, CUBN, cubilin, [Score=60.8, Expect=3e-10]} {Mouse: ENSMUSG00000049252, Lrp1b, low density lipoprotein-related protein 1B (deleted in tumors), [Score=52.8, Expect=8e-08]; ENSMUSG00000047793, Sned1, sushi, nidogen and EGF-like domains 1, [Score=51.6, Expect=2e-07]; ENSMUSG00000074505, Fat3, FAT atypical cadherin 3, [Score=51.2, Expect=3e-07]} {Dmel: FBgn0259140, CG42255, [Score=46.2, Expect=1e-05]} {Celegans: WBGene00018547, clec-78, C-type LECtin, [Score=54.3, Expect=2e-08]} {RNA1509_38266} {RNA1310_19274} {RNA815_9585.2}
33. MligTC455_15952 131 2.73 Mlig455_044303

Neo: -

Age: -

 0.958 - - - - - 0.958 Mlig455_044303 {REF} {Length: 1141} {NoTransDecoderORF} {RNA1509_33012} {RNA1310_1160.1} {RNA815_41842}
34. MligTC455_25776 220 4.59 Mlig455_000479, Mlig455_024867

Neo: -

Age: -

 0.958 - - - - - 0.958

Mlig455_000479 {REF} {Length: 548} {Pfam: PHD-finger [PF00628.31, score=27.6]} {RNA1310_79789}

Mlig455_024867 {REF} {Length: 1776} {Pfam: PHD-finger [PF00628.31, score=25.7]} {RNA1310_46465}
35. MligTC455_08367 22 0.45 Mlig455_000673

Neo: -

Age: -

 0.957 - - - - - 0.957 Mlig455_000673 {REF} {Length: 899} {Pfam: WSC domain [PF01822.21, score=48.6]; PAN domain [PF00024.28, score=23.3]} {RNA1310_39474.2} {RNA815_33128}
36. MligTC455_04561 26 0.55 Mlig455_024217

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_024217 {REF} {Length: 523} {NoTransDecoderORF} {RNA1310_66947.1}
37. MligTC455_09094 56 1.16 Mlig455_013381

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_013381 {REF} {Length: 506} {NoTransDecoderORF} {RNA1310_99945}
38. MligTC455_15595 114 2.37 Mlig455_009340

Neo: -

Age: -

 0.956 - - - - - 0.956 Mlig455_009340 {REF} {Length: 1538} {TRANSSPLICED} {RNA1310_41965} {RNA815_27810}
39. MligTC455_09656 14 0.3 Mlig455_008782

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_008782 {REF} {Length: 329} {NoTransDecoderORF}
40. MligTC455_18879 26 0.55 Mlig455_063345

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_063345 {REF} {Length: 769} {NoTransDecoderORF}
41. MligTC455_28784 65 1.35 Mlig455_060676

Neo: -

Age: logFC(26M/2M)=-0.366

 ANKRD17 0.954 - - - - - 0.954 Mlig455_060676 {REF} {Length: 5241} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=122.5]; Ankyrin repeats (many copies) [PF13637.8, score=110.0]; Ankyrin repeat [PF13606.8, score=74.0]; Ankyrin repeats (many copies) [PF13857.8, score=61.8]; Mab-21 protein [PF03281.16, score=44.0]; Ankyrin repeat [PF00023.32, score=41.5]; ABC transporter transmembrane region [PF13748.8, score=21.9]} {Human: ENSG00000132466, ANKRD17, ankyrin repeat domain 17, [Score=95.5, Expect=4e-19]} {Mouse: ENSMUSG00000055204, Ankrd17, ankyrin repeat domain 17, [Score=95.9, Expect=2e-19]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=80.1, Expect=8e-15]} {Celegans: WBGene00012124, T28D6.4, [Score=67.8, Expect=3e-11]} {Smed: dd_Smed_v6_5303_0_2, dd_Smed_v6_5303_0_2, [Score=90.5, Expect=2e-18]} {RNA1509_27730} {RNA1310_4721} {RNA815_5358.1}
42. MligTC455_40365 195 4.05 Mlig455_038370

Neo: -

Age: Down-Up-Down

Region-enriched R2: 3.989/0.00156

 0.954 - - - - - 0.954 Mlig455_038370 {REF} {Length: 3062} {RNA1509_57598} {RNA1310_48414, RNA1509_57598} {RNA1509_57598, RNA815_41099}
43. MligTC455_53621 160 3.32 Mlig455_020199

Neo: -

Age: -

 0.954 - - - - - 0.954 Mlig455_020199 {REF} {Length: 3689} {NoTransDecoderORF} {RNA1509_51078} {RNA1310_23737, RNA1509_51078} {RNA1509_51078, RNA815_5685.2}
44. MligTC455_14427 85 1.78 Mlig455_039701

Neo: -

Age: logFC(26M/2M)=0.668

 0.953 - - - 0.953 - - Mlig455_039701 {REF} {Length: 2331} {RNA1509_27161} {RNA1310_5954, RNA1509_27161} {RNA1509_27161, RNA815_17866}
45. MligTC455_30255 132 2.75 Mlig455_011743

Neo: Int S/G2/M

Age: -

Region-enriched R4: 3.728/0.02036

 0.953 - - - - - 0.953 Mlig455_011743 {REF} {Length: 945} {TRANSSPLICED} {RNA1509_16349} {RNA1310_2575} {RNA815_54759}
46. MligTC455_38972 202 4.21 Mlig455_002639, Mlig455_011248, Mlig455_047800

Neo: -

Age: -

 0.953 - - - - - 0.953

Mlig455_002639 {REF} {Length: 229} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_56058} {RNA815_36932.1}

Mlig455_011248 {REF} {Length: 200} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_54013.2} {RNA815_36932.1}

Mlig455_047800 {REF} {Length: 1142} {NoTransDecoderORF} {RNA1509_32404} {RNA1310_57981} {RNA815_36932.1}
47. MligTC455_48125 91 1.9 Mlig455_005602, Mlig455_070397

Neo: -

Age: -

Region-enriched R2: 4.171/0.01740

 0.953 - - - - - 0.953

Mlig455_005602 {REF} {Length: 2407} {RNA1509_6760} {RNA1310_2628} {RNA815_4402}

Mlig455_070397 {REF} {Length: 2447} {RNA1509_6760} {RNA1310_132399} {RNA815_4402}
48. MligTC455_13403 157 3.27 Mlig455_058321

Neo: -

Age: Down-Up-Down

Region-enriched R2: 2.878/0.03174

 LARP1 0.952 - - - - - 0.952 Mlig455_058321 {REF} {Length: 2328} {Human: ENSG00000155506, LARP1, La ribonucleoprotein domain family member 1, [Score=178, Expect=6e-52]} {Mouse: ENSMUSG00000037331, Larp1, La ribonucleoprotein domain family, member 1, [Score=178, Expect=5e-52]; ENSMUSG00000025762, Larp1b, La ribonucleoprotein domain family, member 1B, [Score=171, Expect=9e-54]} {Dmel: FBgn0261618, larp, La related protein, [Score=172, Expect=4e-50]} {Celegans: WBGene00020097, larp-1, La-related protein 1, [Score=136, Expect=2e-37]} {Smed: dd_Smed_v6_2667_0_1, dd_Smed_v6_2667_0_1, [Score=170, Expect=2e-49]} {RNA1509_29509} {RNA1310_3597.2, RNA1509_29509} {RNA1509_29509, RNA815_2607}
49. MligTC455_16155 68 1.41 Mlig455_036156

Neo: -

Age: -

 0.952 - - - - - 0.952 Mlig455_036156 {REF} {Length: 824} {NoTransDecoderORF} {RNA1509_16255} {RNA1310_42433.1} {RNA815_22226}
50. MligTC455_24261 90 1.87 Mlig455_022408

Neo: -

Age: logFC(26M/2M)=-0.488

 0.952 - - - - - 0.952 Mlig455_022408 {REF} {Length: 2883} {Pfam: Dpy-30 motif [PF05186.15, score=36.5]} {RNA1509_44741} {RNA1310_10316, RNA1509_44741} {RNA1509_44741, RNA815_22683}
51. MligTC455_46628 40 0.83 Mlig455_010689

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_010689 {REF} {Length: 2040} {RNA1310_120885}
52. MligTC455_47574 716 14.92 Mlig455_028318, Mlig455_066192

Neo: -

Age: Down-Up-Down, logFC(26M/2M)=1.060

Region-enriched R2: 1.667/0.01738

 MAN1C1 0.951 - - - - - 0.951

Mlig455_028318 {REF} {Length: 2839} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=378.3]; Glycosyl hydrolase family 76 [PF03663.16, score=19.1]} {Human: ENSG00000117643, MAN1C1, mannosidase alpha class 1C member 1, [Score=269, Expect=4e-82]; ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=268, Expect=1e-81]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=268, Expect=1e-81]; ENSMUSG00000037306, Man1c1, mannosidase, alpha, class 1C, member 1, [Score=267, Expect=1e-81]; ENSMUSG00000003746, Man1a, mannosidase 1, alpha, [Score=263, Expect=2e-79]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=266, Expect=5e-81]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=249, Expect=2e-75]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=265, Expect=2e-81]} {RNA1509_9530} {RNA1310_9474.1} {RNA815_6962}

Mlig455_066192 {REF} {Length: 2836} {TRANSSPLICED} {Pfam: Glycosyl hydrolase family 47 [PF01532.22, score=378.3]; Glycosyl hydrolase family 76 [PF03663.16, score=19.1]} {Human: ENSG00000117643, MAN1C1, mannosidase alpha class 1C member 1, [Score=269, Expect=4e-82]; ENSG00000198162, MAN1A2, mannosidase alpha class 1A member 2, [Score=268, Expect=1e-81]} {Mouse: ENSMUSG00000008763, Man1a2, mannosidase, alpha, class 1A, member 2, [Score=268, Expect=1e-81]; ENSMUSG00000037306, Man1c1, mannosidase, alpha, class 1C, member 1, [Score=267, Expect=1e-81]; ENSMUSG00000003746, Man1a, mannosidase 1, alpha, [Score=263, Expect=2e-79]} {Dmel: FBgn0259170, alpha-Man-Ia, alpha-Mannosidase class I a, [Score=266, Expect=5e-81]} {Celegans: WBGene00008258, mans-2, Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5, [Score=249, Expect=2e-75]} {Smed: dd_Smed_v6_6801_0_1, dd_Smed_v6_6801_0_1, [Score=265, Expect=2e-81]} {RNA1509_53617, RNA1509_9530} {RNA1310_9474.1, RNA1509_53617} {RNA1509_53617, RNA815_6962}
53. MligTC455_56643 11 0.23 Mlig455_002103

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_002103 {REF} {Length: 238} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}
54. MligTC455_56644 11 0.23 Mlig455_002211

Neo: -

Age: -

 0.951 - - - - - 0.951 Mlig455_002211 {REF} {Length: 492} {NoTransDecoderORF} {RNA1310_102097} {RNA815_53280}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA