Data search
Results for MligTC455_30455
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30455 | 22 | 0.45 | Mlig455_065790 | Neo: - Age: - Region-enriched R4: 3.161/0.04726 |
Mlig455_065790 {REF} {Length: 949} {TRANSSPLICED} {RNA1509_37249} {RNA1310_981} {RNA815_31849} |
Cumulative graph for MligTC455_30455
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -7.351 | 0.844 | 0.07471 | 0.60513 | |
| RegionR2 | 0.791 | 0.844 | 0.58863 | 0.94262 | |
| RegionR3 | 0.052 | 0.844 | 0.79538 | 1.00000 | |
| RegionR4 | 3.161 | 0.844 | 0.00708 | 0.04726 | |
| RegionR5 | 1.891 | 0.844 | 0.11417 | 0.33422 | |
| RegionR6 | 3.371 | 0.844 | 0.00828 | 0.14982 | |
| RegionR7 | 0.247 | 0.844 | 0.84543 | 1.00000 | |
| RegionR8 | -2.16 | 0.844 | 1.00000 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -1.572 | 0.844 | 0.99993 | 1.00000 | |
| RegenerationR2 | -2.326 | 0.844 | 0.08730 | 0.47439 | |
| RegenerationR3 | -1.088 | 0.844 | 0.48428 | 0.85239 | |
| RegenerationR4 | -1.934 | 0.844 | 0.15906 | 0.59099 | |
| RegenerationR5 | -3.063 | 0.844 | 0.01319 | 0.20154 | |
| RegenerationR6 | -2.863 | 0.844 | 0.01963 | 0.17300 | |
| RegenerationBL | -3.805 | 0.844 | 0.17045 | 0.49520 | |
| RegenerationTP | -0.021 | 0.844 | 0.78583 | 1.00000 |
Genes with expression patterns similar to MligTC455_30455
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30455 | 22 | 0.45 | Mlig455_065790 | Neo: - Age: - Region-enriched R4: 3.161/0.04726 |
2 | - | 1.000 | - | 1.000 | - | - | Mlig455_065790 {REF} {Length: 949} {TRANSSPLICED} {RNA1509_37249} {RNA1310_981} {RNA815_31849} | |
| 2. | MligTC455_36890 | 19 | 0.39 | Mlig455_039227 | Neo: - Age: Down-Down-Down |
0.986 | - | - | - | 0.986 | - | - | Mlig455_039227 {REF} {Length: 930} {TRANSSPLICED} {RNA1509_6383} {RNA1310_41531.1} {RNA815_17487.1} | |
| 3. | MligTC455_21683 | 16 | 0.33 | Mlig455_006027 | Neo: - Age: - |
0.972 | - | - | - | 0.972 | - | - | Mlig455_006027 {REF} {Length: 1056} {NoTransDecoderORF} | |
| 4. | MligTC455_30454 | 39 | 0.82 | Mlig455_022994 | Neo: - |
0.97 | - | - | - | 0.970 | - | - | Mlig455_022994 {REF} {Length: 1336} {Pfam: Phage integrase family [PF00589.24, score=23.1]} {RNA1509_25737} {RNA1310_2048} {RNA815_551.1} | |
| 5. | MligTC455_16621 | 49 | 1.02 | Mlig455_020457 | Neo: - Age: Up-Down-Up |
0.969 | - | - | - | 0.969 | - | - | Mlig455_020457 {REF} {Length: 2984} {Pfam: Papain family cysteine protease [PF00112.25, score=19.4]} {RNA1509_11606} {RNA1310_6063.3} {RNA815_1093} | |
| 6. | MligTC455_47957 | 467 | 9.72 | Mlig455_004468, Mlig455_037362 | Neo: Int S/G2/M Age: - |
CDC123 | 0.969 | - | - | - | 0.969 | - | - | Mlig455_004468 {REF} {Length: 1711} {TRANSSPLICED} {Pfam: D123 [PF07065.16, score=163.9]} {Human: ENSG00000151465, CDC123, cell division cycle 123, [Score=110, Expect=8e-28]} {Mouse: ENSMUSG00000039128, Cdc123, cell division cycle 123, [Score=117, Expect=3e-30]} {Smed: dd_Smed_v6_12823_0_1, dd_Smed_v6_12823_0_1, [Score=77.8, Expect=2e-16]} {RNA1509_21083} {RNA1310_20687} {RNA815_16902} Mlig455_037362 {REF} {Length: 1754} {TRANSSPLICED} {Pfam: D123 [PF07065.16, score=224.9]} {Human: ENSG00000151465, CDC123, cell division cycle 123, [RH, Score=154, Expect=4e-43]} {Mouse: ENSMUSG00000039128, Cdc123, cell division cycle 123, [RH, Score=158, Expect=6e-45]} {Smed: dd_Smed_v6_12823_0_1, dd_Smed_v6_12823_0_1, [RH, Score=93.2, Expect=2e-21]} {RNA1509_21083} {RNA1310_16922.1, RNA1509_21083} {RNA1509_21083, RNA815_16902} |
| 7. | MligTC455_16171 | 51 | 1.07 | Mlig455_001659, Mlig455_050105 | Neo: - Age: - |
0.954 | - | - | - | 0.954 | - | - | Mlig455_001659 {REF} {Length: 762} Mlig455_050105 {REF} {Length: 859} |
|
| 8. | MligTC455_17173 | 46 | 0.96 | Mlig455_059401 | Neo: - Age: Up-Down-Up Region-enriched R4: 6.142/0.00000 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_059401 {REF} {Length: 798} {RNA1310_42556} {RNA815_63393} | |
| 9. | MligTC455_12652 | 12 | 0.26 | Mlig455_064054 | Neo: - Age: Down-Up-Down |
0.952 | - | - | - | 0.952 | - | - | Mlig455_064054 {REF} {Length: 1664} {NoTransDecoderORF} {RNA1509_36797} {RNA1310_21391, RNA1509_36797} {RNA1509_36797, RNA815_28364} | |
| 10. | MligTC455_22104 | 54 | 1.12 | Mlig455_018878 | Neo: - Age: - |
RTL1 | 0.952 | - | - | - | 0.952 | - | - | Mlig455_018878 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.3]; Integrase core domain [PF00665.28, score=28.2]; Integrase core domain [PF13683.8, score=20.8]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=228, Expect=7e-66]} {RNA1509_36857} {RNA1310_23998} {RNA815_6067.1} |
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