TomoSeq data search

Data search

Results for MligTC455_36890

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_36890	19	0.39	Mlig455_039227	Neo: - Age: Down-Down-Down		Mlig455_039227 {REF} {Length: 930} {TRANSSPLICED} {RNA1509_6383} {RNA1310_41531.1} {RNA815_17487.1}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_36890

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-	-	-	-
RegionR2	-	-	-	-
RegionR3	-	-	-	-
RegionR4	-	-	-	-
RegionR5	-	-	-	-
RegionR6	-	-	-	-
RegionR7	-	-	-	-
RegionR8	-	-	-	-

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	-	-	-	-
RegenerationR2	-	-	-	-
RegenerationR3	-	-	-	-
RegenerationR4	-	-	-	-
RegenerationR5	-	-	-	-
RegenerationR6	-	-	-	-
RegenerationBL	-	-	-	-
RegenerationTP	-	-	-	-

Genes with expression patterns similar to MligTC455_36890

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_36890	19	0.39	Mlig455_039227	Neo: - Age: Down-Down-Down		1	-	-	-	1.000	-	-	Mlig455_039227 {REF} {Length: 930} {TRANSSPLICED} {RNA1509_6383} {RNA1310_41531.1} {RNA815_17487.1}
2.	MligTC455_30455	22	0.45	Mlig455_065790	Neo: - Age: - Region-enriched R4: 3.161/0.04726		0.986	-	-	-	0.986	-	-	Mlig455_065790 {REF} {Length: 949} {TRANSSPLICED} {RNA1509_37249} {RNA1310_981} {RNA815_31849}
3.	MligTC455_21683	16	0.33	Mlig455_006027	Neo: - Age: -		0.984	-	-	-	0.984	-	-	Mlig455_006027 {REF} {Length: 1056} {NoTransDecoderORF}
4.	MligTC455_16171	51	1.07	Mlig455_001659, Mlig455_050105	Neo: - Age: -		0.968	-	-	-	0.968	-	-	Mlig455_001659 {REF} {Length: 762} Mlig455_050105 {REF} {Length: 859}
5.	MligTC455_12652	12	0.26	Mlig455_064054	Neo: - Age: Down-Up-Down		0.963	-	-	-	0.963	-	-	Mlig455_064054 {REF} {Length: 1664} {NoTransDecoderORF} {RNA1509_36797} {RNA1310_21391, RNA1509_36797} {RNA1509_36797, RNA815_28364}
6.	MligTC455_11009	31	0.65	Mlig455_047390	Neo: - Age: -		0.962	-	-	-	0.962	-	-	Mlig455_047390 {REF} {Length: 1714} {RNA1509_57286} {RNA1310_29146, RNA1509_57286} {RNA1509_57286, RNA815_16634}
7.	MligTC455_22104	54	1.12	Mlig455_018878	Neo: - Age: -	RTL1	0.962	-	-	-	0.962	-	-	Mlig455_018878 {REF} {Length: 3742} {TRANSSPLICED} {Pfam: RNase H-like domain found in reverse transcriptase [PF17919.3, score=121.6]; RNase H-like domain found in reverse transcriptase [PF17917.3, score=79.0]; Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=72.3]; Integrase core domain [PF00665.28, score=28.2]; Integrase core domain [PF13683.8, score=20.8]} {Human: ENSG00000254656, RTL1, retrotransposon Gag like 1, [Score=101, Expect=3e-21]} {Mouse: ENSMUSG00000085925, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]; ENSMUSG00000098639, Rtl1, retrotransposon Gaglike 1, [Score=88.6, Expect=2e-17]} {Smed: dd_Smed_v6_1574_6_43, dd_Smed_v6_1574_6_43, [Score=228, Expect=7e-66]} {RNA1509_36857} {RNA1310_23998} {RNA815_6067.1}
8.	MligTC455_40978	45534	948.62	Mlig455_019491, Mlig455_060549	Neo: - Age: logFC(26M/2M)=-0.362 Region-enriched R7: 5.115/0.00000 Region-enriched R8: 4.169/0.00046 Regeneration-downregulated BL: -7.973 Regeneration-depleted BL: -7.973	HNRNPA2B1, WSCD2	0.962	-	-	-	0.962	-	-	Mlig455_019491 {REF} {Length: 1460} {Pfam: WSC domain [PF01822.21, score=87.9]} {Human: ENSG00000075035, WSCD2, WSC domain containing 2, [Score=69.7, Expect=2e-12]} {Mouse: ENSMUSG00000063430, Wscd2, WSC domain containing 2, [Score=63.5, Expect=1e-10]} {Dmel: FBgn0029697, CG15570, [Score=58.9, Expect=4e-09]} {RNA1509_2474} {RNA1310_28319.1} {RNA815_11100.1} Mlig455_060549 {REF} {Length: 2576} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=97.2]; WSC domain [PF01822.21, score=47.8]; RNA recognition motif [PF16367.7, score=36.4]} {Human: ENSG00000122566, HNRNPA2B1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=159, Expect=2e-43]; ENSG00000135486, HNRNPA1, heterogeneous nuclear ribonucleoprotein A1, [Score=154, Expect=7e-41]} {Mouse: ENSMUSG00000004980, Hnrnpa2b1, heterogeneous nuclear ribonucleoprotein A2/B1, [Score=156, Expect=6e-42]} {Dmel: FBgn0004903, Rb97D, Ribonuclear protein at 97D, [Score=164, Expect=1e-43]} {Celegans: WBGene00001999, hrp-1, Heterogeneous nuclear ribonucleoprotein A1, [Score=150, Expect=7e-40]} {Smed: dd_Smed_v6_1194_0_2, dd_Smed_v6_1194_0_2, [Score=193, Expect=6e-56]} {RNA1509_21450} {RNA1310_33386.1} {RNA815_11100.1}
9.	MligTC455_16621	49	1.02	Mlig455_020457	Neo: - Age: Up-Down-Up		0.961	-	-	-	0.961	-	-	Mlig455_020457 {REF} {Length: 2984} {Pfam: Papain family cysteine protease [PF00112.25, score=19.4]} {RNA1509_11606} {RNA1310_6063.3} {RNA815_1093}
10.	MligTC455_17173	46	0.96	Mlig455_059401	Neo: - Age: Up-Down-Up Region-enriched R4: 6.142/0.00000		0.96	-	-	-	0.960	-	-	Mlig455_059401 {REF} {Length: 798} {RNA1310_42556} {RNA815_63393}
11.	MligTC455_18421	221	4.61	Mlig455_051563	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.356	GGPS1	0.959	-	-	-	0.959	-	-	Mlig455_051563 {REF} {Length: 1568} {TRANSSPLICED} {Pfam: Polyprenyl synthetase [PF00348.19, score=214.9]} {Human: ENSG00000152904, GGPS1, geranylgeranyl diphosphate synthase 1, [RH, Score=312, Expect=5e-106]} {Mouse: ENSMUSG00000021302, Ggps1, geranylgeranyl diphosphate synthase 1, [RH, Score=316, Expect=9e-108]} {Dmel: FBgn0019662, qm, quemao, [RH, Score=276, Expect=1e-91]} {Celegans: WBGene00000761, coq-1, COenzyme Q (Ubiquinone) biosynthesis, [Score=61.6, Expect=1e-10]} {Smed: dd_Smed_v6_7235_0_2, dd_Smed_v6_7235_0_2, [RH, Score=300, Expect=2e-101]} {RNA1509_28048, RNA1509_33893} {RNA1310_30605, RNA1509_33893} {RNA1509_33893, RNA815_14345}
12.	MligTC455_29977	117	2.44	Mlig455_062231	Neo: - Age: -		0.958	-	-	-	0.958	-	-	Mlig455_062231 {REF} {Length: 1240} {RNA1310_34632} {RNA815_15994}
13.	MligTC455_52612	22	0.47	Mlig455_035013	Neo: Irradiation Age: Up-Down-Down		0.958	-	-	-	0.958	-	-	Mlig455_035013 {REF} {Length: 1616} {Pfam: FHA domain [PF00498.28, score=43.9]; PHD-finger [PF00628.31, score=26.4]} {Smed: dd_Smed_v6_8216_0_1, dd_Smed_v6_8216_0_1, [RH, Score=135, Expect=5e-36]} {RNA1509_20895, RNA1509_51175} {RNA1310_11328, RNA1509_20895, RNA1509_51175} {RNA1509_20895, RNA1509_51175, RNA815_15343}
14.	MligTC455_43724	319	6.65	Mlig455_066635	Neo: - Age: Up-Down-Down		0.956	-	-	-	0.956	-	-	Mlig455_066635 {REF} {Length: 1309} {NoTransDecoderORF} {RNA1509_18795, RNA1509_44729} {RNA1310_43399, RNA1509_18795, RNA1509_44729} {RNA1509_18795, RNA1509_44729, RNA815_29113.1}
15.	MligTC455_25944	80	1.67	Mlig455_019326, Mlig455_019441	Neo: - Age: Down-Up-Down	MX2	0.955	-	-	-	0.955	-	-	Mlig455_019326 {REF} {Length: 2842} {Pfam: Dynamin central region [PF01031.22, score=135.3]; Dynamin family [PF00350.25, score=134.3]; 50S ribosome-binding GTPase [PF01926.25, score=27.8]; Dynamin GTPase effector domain [PF02212.20, score=27.7]; Ferrous iron transport protein B [PF02421.20, score=22.3]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=302, Expect=6e-92]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=299, Expect=3e-91]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=290, Expect=5e-88]} {Dmel: FBgn0003392, shi, shibire, [Score=163, Expect=8e-42]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=166, Expect=6e-43]} {Smed: dd_Smed_v6_6863_0_1, dd_Smed_v6_6863_0_1, [Score=164, Expect=3e-42]} {RNA1509_17853} {RNA1310_5329.2} {RNA815_1588.1} Mlig455_019441 {REF} {Length: 2736} {Pfam: Dynamin family [PF00350.25, score=134.3]; Dynamin central region [PF01031.22, score=80.0]; 50S ribosome-binding GTPase [PF01926.25, score=28.1]; Ferrous iron transport protein B [PF02421.20, score=22.2]} {Human: ENSG00000183486, MX2, MX dynamin like GTPase 2, [Score=248, Expect=7e-72]; ENSG00000157601, MX1, MX dynamin like GTPase 1, [Score=247, Expect=4e-72]} {Mouse: ENSMUSG00000023341, Mx2, MX dynamin-like GTPase 2, [Score=236, Expect=2e-68]} {Dmel: FBgn0003392, shi, shibire, [Score=142, Expect=5e-35]} {Celegans: WBGene00001130, dyn-1, Dynamin, [Score=149, Expect=4e-37]} {Smed: dd_Smed_v6_6863_0_3, dd_Smed_v6_6863_0_3, [Score=147, Expect=1e-36]} {RNA1509_17853} {RNA1310_5329.2} {RNA815_1588.1}
16.	MligTC455_36063	57	1.19	Mlig455_015640, Mlig455_020112, Mlig455_027622, Mlig455_045945, Mlig455_045973	Neo: Germline Age: -		0.954	-	-	-	0.954	-	-	Mlig455_015640 {REF} {Length: 1064} {Pfam: Phage integrase family [PF00589.24, score=20.8]} {RNA1310_118313} {RNA815_64822} Mlig455_020112 {REF} {Length: 1119} {RNA1509_19049} {RNA1310_107645} {RNA815_64822} Mlig455_027622 {REF} {Length: 693} {RNA1509_19747} {RNA1310_107645} {RNA815_64822} Mlig455_045945 {REF} {Length: 1439} {Pfam: Phage integrase family [PF00589.24, score=22.0]} {RNA1509_19747} {RNA1310_118313} {RNA815_64822} Mlig455_045973 {REF} {Length: 1439} {Pfam: Phage integrase family [PF00589.24, score=22.0]} {RNA1509_19747} {RNA1310_118313} {RNA815_64822}
17.	MligTC455_47957	467	9.72	Mlig455_004468, Mlig455_037362	Neo: Int S/G2/M Age: -	CDC123	0.954	-	-	-	0.954	-	-	Mlig455_004468 {REF} {Length: 1711} {TRANSSPLICED} {Pfam: D123 [PF07065.16, score=163.9]} {Human: ENSG00000151465, CDC123, cell division cycle 123, [Score=110, Expect=8e-28]} {Mouse: ENSMUSG00000039128, Cdc123, cell division cycle 123, [Score=117, Expect=3e-30]} {Smed: dd_Smed_v6_12823_0_1, dd_Smed_v6_12823_0_1, [Score=77.8, Expect=2e-16]} {RNA1509_21083} {RNA1310_20687} {RNA815_16902} Mlig455_037362 {REF} {Length: 1754} {TRANSSPLICED} {Pfam: D123 [PF07065.16, score=224.9]} {Human: ENSG00000151465, CDC123, cell division cycle 123, [RH, Score=154, Expect=4e-43]} {Mouse: ENSMUSG00000039128, Cdc123, cell division cycle 123, [RH, Score=158, Expect=6e-45]} {Smed: dd_Smed_v6_12823_0_1, dd_Smed_v6_12823_0_1, [RH, Score=93.2, Expect=2e-21]} {RNA1509_21083} {RNA1310_16922.1, RNA1509_21083} {RNA1509_21083, RNA815_16902}
18.	MligTC455_19826	31	0.65	Mlig455_063810	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_063810 {REF} {Length: 3558} {TRANSSPLICED} {RNA1509_26683} {RNA1310_16438} {RNA815_37556}
19.	MligTC455_20303	38	0.79	Mlig455_049383	Neo: - Age: -		0.952	-	-	-	0.952	-	-	Mlig455_049383 {REF} {Length: 4246} {Pfam: Serpentine type 7TM GPCR chemoreceptor Srw [PF10324.11, score=38.2]; 7 transmembrane receptor (rhodopsin family) [PF00001.23, score=36.9]; Serpentine type 7TM GPCR chemoreceptor Srv [PF10323.11, score=23.7]} {RNA1509_28642} {RNA1310_30601} {RNA815_20505}
20.	MligTC455_34378	71	1.47	Mlig455_066816	Neo: - Age: - Region-enriched R6: 3.196/0.03126 Region-enriched R5: 2.507/0.04831		0.95	-	-	-	0.950	-	-	Mlig455_066816 {REF} {Length: 896} {NoTransDecoderORF} {RNA1509_46404} {RNA1310_79622} {RNA815_10793}
21.	MligTC455_36793	457	9.52	Mlig455_006203, Mlig455_059291, Mlig455_065204	Neo: Germline Age: - Region-specific R4: 5.200 Region-enriched R4: 3.376/0.02142	PRR9	0.95	-	-	-	0.950	-	-	Mlig455_006203 {REF} {Length: 1777} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.9]; Integrase core domain [PF00665.28, score=36.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.4, Expect=1e-11]} {RNA1509_57967} {RNA1310_55181.1} {RNA815_36039} Mlig455_059291 {REF} {Length: 545} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=48.9]; Integrase core domain [PF00665.28, score=36.9]} {Smed: dd_Smed_v6_3718_0_2, dd_Smed_v6_3718_0_2, [Score=67.4, Expect=1e-11]} {RNA1509_57967} {RNA1310_55181.1} {RNA815_36039} Mlig455_065204 {REF} {Length: 2877} {Human: ENSG00000203783, PRR9, proline rich 9, [Score=45.4, Expect=3e-06]} {RNA1509_57967} {RNA1310_45832, RNA1509_57967} {RNA1509_57967, RNA815_34745}
22.	MligTC455_52465	414	8.63	Mlig455_001618	Neo: - Age: - Region-enriched R2: 1.980/0.03235	BAG1	0.95	-	-	-	0.950	-	-	Mlig455_001618 {REF} {Length: 1592} {TRANSSPLICED} {Pfam: Ubiquitin family [PF00240.25, score=38.5]; Ubiquitin-like domain [PF18037.3, score=26.6]; TANK binding kinase 1 ubiquitin-like domain [PF18396.3, score=20.9]} {Human: ENSG00000107262, BAG1, BCL2 associated athanogene 1, [RH, Score=81.6, Expect=8e-19]} {Mouse: ENSMUSG00000028416, Bag1, BCL2-associated athanogene 1, [RH, Score=74.3, Expect=3e-16]} {RNA1509_15630} {RNA1310_15366, RNA1509_15630} {RNA1509_15630, RNA815_9266.1}