Data search
Results for MligTC455_30506
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_30506 | 16 | 0.33 | Mlig455_055246 | Neo: - Age: logFC(26M/2M)=-0.628 |
CHRNA3 | Mlig455_055246 {REF} {Length: 2612} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=199.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=164.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=338, Expect=7e-110]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=330, Expect=7e-107]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=347, Expect=2e-113]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=334, Expect=1e-108]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=394, Expect=8e-132]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=336, Expect=2e-109]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=475, Expect=5e-164]} {RNA1509_13864} {RNA1310_13542, RNA1509_13864} {RNA1509_13864, RNA815_5136} |
Cumulative graph for MligTC455_30506
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -2.413 | 0.594 | 0.99990 | 1.00000 | |
| RegionR2 | 3.219 | 0.594 | 0.99985 | 1.00000 | |
| RegionR3 | 0.62 | 0.594 | 0.99995 | 1.00000 | |
| RegionR4 | -2.051 | 0.594 | 0.99988 | 1.00000 | |
| RegionR5 | -0.395 | 0.594 | 0.99998 | 1.00000 | |
| RegionR6 | 0.633 | 0.594 | 0.99996 | 1.00000 | |
| RegionR7 | 0.007 | 0.594 | 0.99998 | 1.00000 | |
| RegionR8 | 0.38 | 0.594 | 0.99999 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 4.17 | 0.594 | 0.99994 | 1.00000 | |
| RegenerationR2 | 3.392 | 0.594 | 0.01244 | 0.18182 | |
| RegenerationR3 | 6.248 | 0.594 | 0.00275 | 0.09170 | |
| RegenerationR4 | 5.858 | 0.594 | 0.00411 | 0.08808 | |
| RegenerationR5 | 2.866 | 0.594 | 0.99982 | 1.00000 | |
| RegenerationR6 | 5.429 | 0.594 | 0.00581 | 0.09231 | |
| RegenerationBL | 6.247 | 0.594 | 0.00301 | 0.04698 | |
| RegenerationTP | 5.889 | 0.594 | 0.00954 | 0.16543 |
Genes with expression patterns similar to MligTC455_30506
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_30506 | 16 | 0.33 | Mlig455_055246 | Neo: - Age: logFC(26M/2M)=-0.628 |
CHRNA3 | 1 | - | - | - | - | - | 1.000 | Mlig455_055246 {REF} {Length: 2612} {Pfam: Neurotransmitter-gated ion-channel ligand binding domain [PF02931.25, score=199.4]; Neurotransmitter-gated ion-channel transmembrane region [PF02932.18, score=164.9]} {Human: ENSG00000080644, CHRNA3, cholinergic receptor nicotinic alpha 3 subunit, [Score=338, Expect=7e-110]; ENSG00000147434, CHRNA6, cholinergic receptor nicotinic alpha 6 subunit, [Score=330, Expect=7e-107]} {Mouse: ENSMUSG00000031491, Chrna6, cholinergic receptor, nicotinic, alpha polypeptide 6, [Score=347, Expect=2e-113]; ENSMUSG00000032303, Chrna3, cholinergic receptor, nicotinic, alpha polypeptide 3, [Score=334, Expect=1e-108]} {Dmel: FBgn0266347, nAChRalpha4, nicotinic Acetylcholine Receptor alpha4, [Score=394, Expect=8e-132]} {Celegans: WBGene00006797, unc-63, Acetylcholine receptor subunit alpha-type unc-63, [Score=336, Expect=2e-109]} {Smed: dd_Smed_v6_9799_0_1, dd_Smed_v6_9799_0_1, [Score=475, Expect=5e-164]} {RNA1509_13864} {RNA1310_13542, RNA1509_13864} {RNA1509_13864, RNA815_5136} |
| 2. | MligTC455_13847 | 144 | 3 | Mlig455_005556 | Neo: - Age: logFC(26M/2M)=-0.534 Region-enriched R2: 3.307/0.04973 |
TEKT3 | 0.966 | - | - | - | - | - | 0.966 | Mlig455_005556 {REF} {Length: 3025} {Pfam: Tektin family [PF03148.16, score=370.9]} {Human: ENSG00000125409, TEKT3, tektin 3, [Score=286, Expect=7e-91]} {Mouse: ENSMUSG00000042189, Tekt3, tektin 3, [Score=269, Expect=2e-84]} {Dmel: FBgn0052819, CG32819, [Score=201, Expect=2e-58]} {Smed: dd_Smed_v6_6511_0_1, dd_Smed_v6_6511_0_1, [Score=329, Expect=4e-108]} {RNA1509_15766} {RNA1310_13406} {RNA815_7559} |
| 3. | MligTC455_16079 | 136 | 2.84 | Mlig455_042498 | Neo: - Age: logFC(26M/2M)=0.797 |
0.965 | - | - | - | - | - | 0.965 | Mlig455_042498 {REF} {Length: 2366} {RNA1509_55486} {RNA1310_26714.2, RNA1509_55486} {RNA1509_55486, RNA815_22393} | |
| 4. | MligTC455_11059 | 54 | 1.13 | Mlig455_034683 | Neo: - Age: - |
0.957 | - | - | - | - | - | 0.957 | Mlig455_034683 {REF} {Length: 1017} {NoTransDecoderORF} {RNA1509_16318} {RNA1310_94190} {RNA815_40826} | |
| 5. | MligTC455_51845 | 96 | 2 | Mlig455_059142, Mlig455_059399 | Neo: - Age: logFC(26M/2M)=-0.396 Region-enriched R2: 5.680/0.00160 |
0.956 | - | - | - | - | - | 0.956 | Mlig455_059142 {REF} {Length: 2210} {Smed: dd_Smed_v6_5005_0_1, dd_Smed_v6_5005_0_1, [RH, Score=56.6, Expect=7e-09]} {RNA1509_39386} {RNA1310_8311.1} {RNA815_22938} Mlig455_059399 {REF} {Length: 2939} {Smed: dd_Smed_v6_5005_0_1, dd_Smed_v6_5005_0_1, [RH, Score=58.9, Expect=4e-09]} {RNA1509_39386} {RNA1310_8311.1, RNA1509_39386} {RNA1509_39386, RNA815_22938} |
|
| 6. | MligTC455_26134 | 100 | 2.08 | Mlig455_037023 | Neo: - Age: - |
0.953 | - | - | - | - | - | 0.953 | Mlig455_037023 {REF} {Length: 2841} {RNA1509_41127} {RNA1310_13927} {RNA815_18472} |
Berezikov Lab - 2020-2021 © ERIBA