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Results for MligTC455_30587

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30587 604 12.58 Mlig455_016550

Neo: -

Age: -

 INTS4 Mlig455_016550 {REF} {Length: 2047} {Pfam: HEAT repeat [PF02985.24, score=28.8]; HEAT repeats [PF13646.8, score=25.9]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [Score=184, Expect=2e-49]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [Score=183, Expect=3e-49]} {Dmel: FBgn0026679, IntS4, Integrator 4, [Score=160, Expect=2e-41]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=130, Expect=8e-32]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=164, Expect=2e-43]} {RNA1509_7538} {RNA1310_4572} {RNA815_17108}

Cumulative graph for MligTC455_30587

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.455 4.129 0.77048 1.00000
RegionR2 0.471 4.129 0.42004 0.81197
RegionR3 0.497 4.129 0.28591 0.82798
RegionR4 0.772 4.129 0.14795 0.39617
RegionR5 0.973 4.129 0.01648 0.08401
RegionR6 0.69 4.129 0.13954 0.67157
RegionR7 -0.49 4.129 0.51015 1.00000
RegionR8 -2.458 4.129 0.05147 0.44280

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.322 4.129 0.87984 1.00000
RegenerationR2 0.703 4.129 0.07109 0.43303
RegenerationR3 0.146 4.129 0.75079 0.96501
RegenerationR4 0.117 4.129 0.80833 0.98889
RegenerationR5 0.375 4.129 0.35054 0.76516
RegenerationR6 0.254 4.129 0.56636 0.84921
RegenerationBL 0.737 4.129 0.33004 0.69624
RegenerationTP 1.209 4.129 0.18564 0.62270


Genes with expression patterns similar to MligTC455_30587

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30587 604 12.58 Mlig455_016550

Neo: -

Age: -

 INTS4 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_016550 {REF} {Length: 2047} {Pfam: HEAT repeat [PF02985.24, score=28.8]; HEAT repeats [PF13646.8, score=25.9]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [Score=184, Expect=2e-49]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [Score=183, Expect=3e-49]} {Dmel: FBgn0026679, IntS4, Integrator 4, [Score=160, Expect=2e-41]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=130, Expect=8e-32]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=164, Expect=2e-43]} {RNA1509_7538} {RNA1310_4572} {RNA815_17108}
2. MligTC455_30588 1200 25 Mlig455_009011, Mlig455_016606

Neo: Int S/G2/M

Age: -

 INTS4 5.949 1.000 0.998 0.999 0.999 0.953 1.000

Mlig455_009011 {REF} {Length: 3153} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=39.5]; HEAT repeats [PF13646.8, score=26.2]; HEAT-like repeat [PF13513.8, score=21.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.3]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [RH, Score=219, Expect=1e-58]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [RH, Score=218, Expect=2e-58]} {Dmel: FBgn0026679, IntS4, Integrator 4, [RH, Score=186, Expect=7e-48]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=143, Expect=1e-34]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=183, Expect=1e-47]} {RNA1509_7538} {RNA1310_4572} {RNA815_17108}

Mlig455_016606 {REF} {Length: 3576} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=39.3]; HEAT repeats [PF13646.8, score=26.2]; HEAT-like repeat [PF13513.8, score=21.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.3]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [RH, Score=219, Expect=2e-58]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [RH, Score=218, Expect=3e-58]} {Dmel: FBgn0026679, IntS4, Integrator 4, [RH, Score=185, Expect=1e-47]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=143, Expect=1e-34]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=183, Expect=9e-48]} {RNA1509_7538} {RNA1310_4572, RNA1509_7538} {RNA1509_7538, RNA815_17108}
3. MligTC455_44695 1109 23.11 Mlig455_050298

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.290

Region-enriched R5: 1.019/0.01420

 COQ2 1.768 - - - 0.811 - 0.957 Mlig455_050298 {REF} {Length: 1473} {TRANSSPLICED} {Pfam: UbiA prenyltransferase family [PF01040.20, score=172.3]} {Human: ENSG00000173085, COQ2, coenzyme Q2, polyprenyltransferase, [RH, Score=325, Expect=3e-108]} {Mouse: ENSMUSG00000029319, Coq2, coenzyme Q2 4-hydroxybenzoate polyprenyltransferase, [RH, Score=317, Expect=1e-105]} {Dmel: FBgn0037574, Coq2, Coenzyme Q biosynthesis protein 2, [RH, Score=322, Expect=1e-107]} {Celegans: WBGene00000762, coq-2, 4-hydroxybenzoate polyprenyltransferase, mitochondrial, [RH, Score=293, Expect=1e-96]} {Smed: dd_Smed_v6_7492_0_2, dd_Smed_v6_7492_0_2, [RH, Score=345, Expect=9e-118]} {RNA1509_29720, RNA1509_48386, RNA1509_58808} {RNA1310_22083.2, RNA1509_29720, RNA1509_48386, RNA1509_58808} {RNA1509_29720, RNA1509_48386, RNA1509_58808, RNA815_9267.1}
4. MligTC455_46152 314 6.55 Mlig455_033099

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.437

 PPP2R5A 0.97 - - - - - 0.970 Mlig455_033099 {REF} {Length: 2326} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=583.2]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=674, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=683, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=666, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=647, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=718, Expect=0.0]} {RNA1509_14734} {RNA1310_9707.1, RNA1509_14734} {RNA1509_14734, RNA815_3247.1}
5. MligTC455_51561 423 8.82 Mlig455_030638

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.130/0.02626

 RMI1 0.965 - - - - - 0.965 Mlig455_030638 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.2]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=70.3]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=121, Expect=7e-29]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=116, Expect=1e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=70.9, Expect=2e-12]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_19306} {RNA1310_8212.1} {RNA815_20681}
6. MligTC455_04401 1087 22.65 Mlig455_044908, Mlig455_044962, Mlig455_055542

Neo: -

Age: -

Region-enriched R4: 1.584/0.03336

 ARID4A 0.963 - - - 0.963 - -

Mlig455_044908 {REF} {Length: 4846} {Pfam: RBB1NT (NUC162) domain [PF08169.13, score=65.4]; ARID/BRIGHT DNA binding domain [PF01388.23, score=55.9]; RNA binding activity-knot of a chromodomain [PF11717.10, score=21.2]; PWWP domain [PF00855.19, score=19.2]} {Human: ENSG00000032219, ARID4A, AT-rich interaction domain 4A, [RH, Score=151, Expect=2e-36]} {Mouse: ENSMUSG00000048118, Arid4a, AT rich interactive domain 4A (RBP1-like), [RH, Score=151, Expect=1e-36]} {Dmel: FBgn0085451, htk, hat-trick, [RH, Score=152, Expect=9e-37]} {Celegans: WBGene00044689, arid-1, ARID (AT-rich Interactive Domain-containing protein) homolog, [RH, Score=117, Expect=3e-26]} {Smed: dd_Smed_v6_4030_0_1, dd_Smed_v6_4030_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_23299}

Mlig455_044962 {REF} {Length: 712} {Pfam: RBB1NT (NUC162) domain [PF08169.13, score=37.6]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_21886}

Mlig455_055542 {REF} {Length: 4763} {TRANSSPLICED} {Pfam: ARID/BRIGHT DNA binding domain [PF01388.23, score=75.5]; RBB1NT (NUC162) domain [PF08169.13, score=65.4]; RNA binding activity-knot of a chromodomain [PF11717.10, score=21.3]; PWWP domain [PF00855.19, score=19.1]} {Human: ENSG00000032219, ARID4A, AT-rich interaction domain 4A, [RH, Score=150, Expect=5e-36]} {Mouse: ENSMUSG00000048118, Arid4a, AT rich interactive domain 4A (RBP1-like), [RH, Score=150, Expect=4e-36]} {Dmel: FBgn0085451, htk, hat-trick, [RH, Score=159, Expect=7e-39]} {Celegans: WBGene00044689, arid-1, ARID (AT-rich Interactive Domain-containing protein) homolog, [RH, Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_4030_0_1, dd_Smed_v6_4030_0_1, [RH, Score=206, Expect=4e-54]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_21886}
7. MligTC455_24229 284 5.91 Mlig455_000706

Neo: Int S/G2/M

Age: -

Regeneration-upregulated R5: 2.332

Regeneration-enriched R5: 2.332

 FUBP3 0.96 - - - 0.960 - - Mlig455_000706 {REF} {Length: 4682} {Pfam: KH domain [PF00013.31, score=200.5]; KH domain [PF07650.19, score=66.2]; KH domain [PF13083.8, score=52.4]; Domain of unknown function (DUF1897) [PF09005.12, score=39.1]} {Human: ENSG00000107164, FUBP3, far upstream element binding protein 3, [Score=236, Expect=1e-68]; ENSG00000088247, KHSRP, KH-type splicing regulatory protein, [Score=229, Expect=5e-65]; ENSG00000162613, FUBP1, far upstream element binding protein 1, [Score=227, Expect=6e-65]} {Mouse: ENSMUSG00000026843, Fubp3, far upstream element (FUSE) binding protein 3, [Score=243, Expect=1e-71]} {Dmel: FBgn0014870, Psi, P-element somatic inhibitor, [Score=87.0, Expect=2e-17]} {Celegans: WBGene00007534, C12D8.1, [Score=199, Expect=8e-56]} {Smed: dd_Smed_v6_812_0_1, dd_Smed_v6_812_0_1, [Score=183, Expect=3e-50]} {RNA1509_36381, RNA1509_46962} {RNA1310_26712, RNA1509_36381} {RNA1509_36381, RNA815_3597.1}
8. MligTC455_42796 1039 21.65 Mlig455_007162

Neo: Int S/G2/M

Age: -

 POLR3C 0.958 - - - - - 0.958 Mlig455_007162 {REF} {Length: 2368} {Pfam: RNA polymerase III subunit RPC82 [PF05645.15, score=24.4]; RNA polymerase III subunit RPC82 helix-turn-helix domain [PF08221.13, score=19.6]; TFIIE alpha subunit [PF02002.19, score=18.9]} {Human: ENSG00000186141, POLR3C, RNA polymerase III subunit C, [RH, Score=180, Expect=7e-49]} {Mouse: ENSMUSG00000028099, Polr3c, polymerase (RNA) III (DNA directed) polypeptide C, [RH, Score=182, Expect=6e-50]} {Dmel: FBgn0038057, CG12267, [RH, Score=106, Expect=7e-24]} {RNA1509_35650, RNA1509_37338, RNA1509_8125} {RNA1310_9635.1, RNA1509_35650, RNA1509_37338} {RNA1509_35650, RNA1509_37338, RNA815_3590.1}
9. MligTC455_45264 453 9.43 Mlig455_066967

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.005/0.01959

 ADAR 0.954 - - - - - 0.954 Mlig455_066967 {REF} {Length: 3553} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=89.7]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [Score=77.4, Expect=4e-14]} {Celegans: WBGene00000079, adr-1, Adenosine Deaminase acting on RNA; Truncated ADR-1F, [Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_4276_0_1, dd_Smed_v6_4276_0_1, [RH, Score=125, Expect=6e-30]} {RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600} {RNA1310_8055.1, RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600} {RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600, RNA815_19621}
10. MligTC455_19651 554 11.55 Mlig455_019936, Mlig455_020010

Neo: -

Age: -

 DDX1 0.952 - - - - - 0.952

Mlig455_019936 {REF} {Length: 3045} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=196.5]; Helicase conserved C-terminal domain [PF00271.33, score=84.3]; SPRY domain [PF00622.30, score=76.4]} {Human: ENSG00000079785, DDX1, DEAD-box helicase 1, [RH, Score=860, Expect=0.0]} {Mouse: ENSMUSG00000037149, Ddx1, DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, [RH, Score=855, Expect=0.0]} {Dmel: FBgn0015075, Ddx1, Dead-box-1, [RH, Score=857, Expect=0.0]} {Celegans: WBGene00021938, Y55F3BR.1, [RH, Score=662, Expect=0.0]} {Smed: dd_Smed_v6_2233_0_1, dd_Smed_v6_2233_0_1, [RH, Score=884, Expect=0.0]} {RNA1509_11547} {RNA1310_8359} {RNA815_3053}

Mlig455_020010 {REF} {Length: 3477} {TRANSSPLICED} {Pfam: DEAD/DEAH box helicase [PF00270.31, score=196.5]; Helicase conserved C-terminal domain [PF00271.33, score=84.3]; SPRY domain [PF00622.30, score=74.7]} {Human: ENSG00000079785, DDX1, DEAD-box helicase 1, [RH, Score=859, Expect=0.0]} {Mouse: ENSMUSG00000037149, Ddx1, DEAD (Asp-Glu-Ala-Asp) box polypeptide 1, [RH, Score=853, Expect=0.0]} {Dmel: FBgn0015075, Ddx1, Dead-box-1, [RH, Score=856, Expect=0.0]} {Celegans: WBGene00021938, Y55F3BR.1, [RH, Score=662, Expect=0.0]} {Smed: dd_Smed_v6_2233_0_1, dd_Smed_v6_2233_0_1, [RH, Score=885, Expect=0.0]} {RNA1509_11547, RNA1509_42011} {RNA1310_8359, RNA1509_11547, RNA1509_42011} {RNA1509_11547, RNA1509_42011, RNA815_3053}
11. MligTC455_43090 224 4.67 Mlig455_012693

Neo: -

Age: Up-Down-Up

 SPAST 0.952 - - - - - 0.952 Mlig455_012693 {REF} {Length: 4302} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=127.2]; AAA+ lid domain [PF17862.3, score=38.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.4]; AAA domain [PF13401.8, score=21.9]; TIP49 P-loop domain [PF06068.15, score=20.6]; IstB-like ATP binding protein [PF01695.19, score=20.2]; Bacterial TniB protein [PF05621.13, score=18.5]} {Human: ENSG00000021574, SPAST, spastin, [RH, Score=345, Expect=6e-114]} {Mouse: ENSMUSG00000024068, Spast, spastin, [RH, Score=342, Expect=9e-112]} {Dmel: FBgn0039141, spas, spastin, [RH, Score=328, Expect=2e-105]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [RH, Score=303, Expect=1e-98]} {Smed: dd_Smed_v6_7472_0_1, dd_Smed_v6_7472_0_1, [RH, Score=322, Expect=1e-104]} {RNA1509_45741, RNA1509_60086} {RNA1310_17702, RNA1509_45741} {RNA1509_45741, RNA815_24923}
12. MligTC455_50994 215 4.47 Mlig455_005156

Neo: Int S/G2/M

Age: -

 PUF60 0.951 - - - - - 0.951 Mlig455_005156 {REF} {Length: 2727} {TRANSSPLICED} {Pfam: RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) [PF00076.24, score=93.7]; RNA recognition motif [PF16367.7, score=29.7]} {Human: ENSG00000274081, PUF60, poly(U) binding splicing factor 60, [Score=226, Expect=4e-71]; ENSG00000179950, PUF60, poly(U) binding splicing factor 60, [Score=226, Expect=3e-71]} {Mouse: ENSMUSG00000002524, Puf60, poly-U binding splicing factor 60, [Score=226, Expect=1e-68]} {Dmel: FBgn0028577, hfp, half pint, [Score=221, Expect=2e-66]} {Celegans: WBGene00004389, rnp-6, RNP (RRM RNA binding domain) containing, [Score=181, Expect=3e-54]} {Smed: dd_Smed_v6_3853_0_3, dd_Smed_v6_3853_0_3, [Score=192, Expect=5e-57]} {RNA1509_19490} {RNA1310_20850, RNA1509_19490} {RNA1509_19490, RNA815_13982}

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