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Results for MligTC455_30588

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30588 1200 25.00 Mlig455_009011, Mlig455_016606

Neo: Int S/G2/M

Age: -

INTS4

Mlig455_009011 {REF} {Length: 3153} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=39.5]; HEAT repeats [PF13646.8, score=26.2]; HEAT-like repeat [PF13513.8, score=21.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.3]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [RH, Score=219, Expect=1e-58]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [RH, Score=218, Expect=2e-58]} {Dmel: FBgn0026679, IntS4, Integrator 4, [RH, Score=186, Expect=7e-48]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=143, Expect=1e-34]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=183, Expect=1e-47]} {RNA1509_7538} {RNA1310_4572} {RNA815_17108}

Mlig455_016606 {REF} {Length: 3576} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=39.3]; HEAT repeats [PF13646.8, score=26.2]; HEAT-like repeat [PF13513.8, score=21.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.3]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [RH, Score=219, Expect=2e-58]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [RH, Score=218, Expect=3e-58]} {Dmel: FBgn0026679, IntS4, Integrator 4, [RH, Score=185, Expect=1e-47]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=143, Expect=1e-34]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=183, Expect=9e-48]} {RNA1509_7538} {RNA1310_4572, RNA1509_7538} {RNA1509_7538, RNA815_17108}

Cumulative graph for MligTC455_30588

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -0.37 5.004 0.75407 1.00000
RegionR2 0.368 5.004 0.47578 0.86101
RegionR3 0.499 5.004 0.21693 0.75839
RegionR4 0.825 5.004 0.08518 0.27631
RegionR5 0.967 5.004 0.00757 0.04718
RegionR6 0.717 5.004 0.07397 0.50561
RegionR7 -0.48 5.004 0.40291 1.00000
RegionR8 -2.526 5.004 0.00834 0.16977

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.342 5.004 0.82890 1.00000
RegenerationR2 0.701 5.004 0.07417 0.44036
RegenerationR3 0.137 5.004 0.75643 0.96652
RegenerationR4 0.14 5.004 0.76491 0.97492
RegenerationR5 0.381 5.004 0.35188 0.76554
RegenerationR6 0.232 5.004 0.58920 0.86312
RegenerationBL 0.975 5.004 0.10549 0.38330
RegenerationTP 1.196 5.004 0.09756 0.48868


Genes with expression patterns similar to MligTC455_30588

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30588 1200 25 Mlig455_009011, Mlig455_016606

Neo: Int S/G2/M

Age: -

INTS4 6 1.000 1.000 1.000 1.000 1.000 1.000

Mlig455_009011 {REF} {Length: 3153} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=39.5]; HEAT repeats [PF13646.8, score=26.2]; HEAT-like repeat [PF13513.8, score=21.5]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.3]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [RH, Score=219, Expect=1e-58]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [RH, Score=218, Expect=2e-58]} {Dmel: FBgn0026679, IntS4, Integrator 4, [RH, Score=186, Expect=7e-48]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=143, Expect=1e-34]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=183, Expect=1e-47]} {RNA1509_7538} {RNA1310_4572} {RNA815_17108}

Mlig455_016606 {REF} {Length: 3576} {TRANSSPLICED} {Pfam: HEAT repeat [PF02985.24, score=39.3]; HEAT repeats [PF13646.8, score=26.2]; HEAT-like repeat [PF13513.8, score=21.4]; non-SMC mitotic condensation complex subunit 1 [PF12717.9, score=20.3]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [RH, Score=219, Expect=2e-58]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [RH, Score=218, Expect=3e-58]} {Dmel: FBgn0026679, IntS4, Integrator 4, [RH, Score=185, Expect=1e-47]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=143, Expect=1e-34]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=183, Expect=9e-48]} {RNA1509_7538} {RNA1310_4572, RNA1509_7538} {RNA1509_7538, RNA815_17108}
2. MligTC455_30587 604 12.58 Mlig455_016550

Neo: -

Age: -

INTS4 5.949 1.000 0.998 0.999 0.999 0.953 1.000 Mlig455_016550 {REF} {Length: 2047} {Pfam: HEAT repeat [PF02985.24, score=28.8]; HEAT repeats [PF13646.8, score=25.9]} {Human: ENSG00000149262, INTS4, integrator complex subunit 4, [Score=184, Expect=2e-49]} {Mouse: ENSMUSG00000025133, Ints4, integrator complex subunit 4, [Score=183, Expect=3e-49]} {Dmel: FBgn0026679, IntS4, Integrator 4, [Score=160, Expect=2e-41]} {Celegans: WBGene00012234, W04A4.5, [RH, Score=130, Expect=8e-32]} {Smed: dd_Smed_v6_10034_0_1, dd_Smed_v6_10034_0_1, [RH, Score=164, Expect=2e-43]} {RNA1509_7538} {RNA1310_4572} {RNA815_17108}
3. MligTC455_38559 651 13.57 Mlig455_045838

Neo: Int S/G2/M

Age: Down-Up-Up, logFC(26M/2M)=0.382

2.41 - - - 0.744 0.954 0.712 Mlig455_045838 {REF} {Length: 2692} {RNA1509_13786, RNA1509_59161} {RNA1310_11954.1, RNA1509_13786, RNA1509_59161} {RNA1509_13786, RNA1509_59161, RNA815_14431}
4. MligTC455_41161 1723 35.89 Mlig455_015003, Mlig455_038650

Neo: -

Age: -

Regeneration-upregulated R6: 1.721

Regeneration-enriched R6: 1.721

RBBP6 1.8 - - - 0.950 - 0.850

Mlig455_015003 {REF} {Length: 3795} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=27.2]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=20.9]; Ring finger domain [PF13639.8, score=20.2]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=78.2, Expect=7e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=78.2, Expect=5e-14]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=96.3, Expect=9e-20]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=61.6, Expect=3e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [Score=80.1, Expect=3e-15]} {RNA1509_48313, RNA1509_5537} {RNA1310_2775, RNA1509_48313} {RNA1509_48313, RNA815_5708}

Mlig455_038650 {REF} {Length: 3834} {TRANSSPLICED} {Pfam: DWNN domain [PF08783.13, score=49.8]; U-box domain [PF04564.17, score=28.5]; Zinc finger, C3HC4 type (RING finger) [PF13923.8, score=21.8]; Ring finger domain [PF13639.8, score=21.3]} {Human: ENSG00000122257, RBBP6, RB binding protein 6, ubiquitin ligase, [Score=80.9, Expect=1e-14]} {Mouse: ENSMUSG00000030779, Rbbp6, retinoblastoma binding protein 6, ubiquitin ligase, [Score=80.5, Expect=9e-15]} {Dmel: FBgn0086129, snama, something that sticks like glue, [Score=91.3, Expect=3e-18]} {Celegans: WBGene00009477, rbpl-1, Retinoblastoma Binding Protein Like, [Score=62.0, Expect=2e-09]} {Smed: dd_Smed_v6_6556_0_1, dd_Smed_v6_6556_0_1, [RH, Score=85.9, Expect=4e-17]} {RNA1509_5537} {RNA1310_2775} {RNA815_5708}
5. MligTC455_44695 1109 23.11 Mlig455_050298

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.290

Region-enriched R5: 1.019/0.01420

COQ2 1.776 - - - 0.821 - 0.955 Mlig455_050298 {REF} {Length: 1473} {TRANSSPLICED} {Pfam: UbiA prenyltransferase family [PF01040.20, score=172.3]} {Human: ENSG00000173085, COQ2, coenzyme Q2, polyprenyltransferase, [RH, Score=325, Expect=3e-108]} {Mouse: ENSMUSG00000029319, Coq2, coenzyme Q2 4-hydroxybenzoate polyprenyltransferase, [RH, Score=317, Expect=1e-105]} {Dmel: FBgn0037574, Coq2, Coenzyme Q biosynthesis protein 2, [RH, Score=322, Expect=1e-107]} {Celegans: WBGene00000762, coq-2, 4-hydroxybenzoate polyprenyltransferase, mitochondrial, [RH, Score=293, Expect=1e-96]} {Smed: dd_Smed_v6_7492_0_2, dd_Smed_v6_7492_0_2, [RH, Score=345, Expect=9e-118]} {RNA1509_29720, RNA1509_48386, RNA1509_58808} {RNA1310_22083.2, RNA1509_29720, RNA1509_48386, RNA1509_58808} {RNA1509_29720, RNA1509_48386, RNA1509_58808, RNA815_9267.1}
6. MligTC455_44173 946 19.7 Mlig455_035147

Neo: -

Age: Up-Down-Down

CCDC186 1.698 - - - 0.742 0.956 - Mlig455_035147 {REF} {Length: 3057} {Human: ENSG00000165813, CCDC186, coiled-coil domain containing 186, [RH, Score=298, Expect=1e-88]} {Mouse: ENSMUSG00000035173, Ccdc186, coiled-coil domain containing 186, [RH, Score=174, Expect=6e-45]} {Dmel: FBgn0036614, Golgin104, Golgin 104, [RH, Score=163, Expect=7e-42]} {Celegans: WBGene00013042, cccp-1, CCCP-1; Conserved Coiled-Coil Protein, [RH, Score=114, Expect=6e-26]} {Smed: dd_Smed_v6_14004_0_1, dd_Smed_v6_14004_0_1, [RH, Score=240, Expect=3e-69]} {RNA1509_6064} {RNA1310_4462} {RNA815_938.1}
7. MligTC455_44172 936 19.49 Mlig455_035142

Neo: -

Age: Up-Down-Up, logFC(26M/2M)=0.372

CCDC186 1.693 - - - 0.733 0.960 - Mlig455_035142 {REF} {Length: 3076} {Human: ENSG00000165813, CCDC186, coiled-coil domain containing 186, [Score=126, Expect=6e-30]} {Mouse: ENSMUSG00000035173, Ccdc186, coiled-coil domain containing 186, [Score=118, Expect=2e-27]} {Dmel: FBgn0036614, Golgin104, Golgin 104, [Score=52.4, Expect=8e-07]} {Smed: dd_Smed_v6_14004_0_1, dd_Smed_v6_14004_0_1, [Score=81.3, Expect=5e-16]} {RNA1509_6064} {RNA1310_4462} {RNA815_938.1}
8. MligTC455_17992 130 2.7 Mlig455_018384

Neo: Irradiation

Age: Down-Up-Down

Region-enriched R5: 3.193/0.00009

0.979 - - - - 0.979 - Mlig455_018384 {REF} {Length: 828} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_38455} {RNA1310_12146, RNA1509_38455} {RNA1509_38455, RNA815_23295}
9. MligTC455_46152 314 6.55 Mlig455_033099

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.437

PPP2R5A 0.969 - - - - - 0.969 Mlig455_033099 {REF} {Length: 2326} {TRANSSPLICED} {Pfam: Protein phosphatase 2A regulatory B subunit (B56 family) [PF01603.22, score=583.2]} {Human: ENSG00000066027, PPP2R5A, protein phosphatase 2 regulatory subunit B'alpha, [RH, Score=674, Expect=0.0]; ENSG00000154001, PPP2R5E, protein phosphatase 2 regulatory subunit B'epsilon, [RH, Score=669, Expect=0.0]} {Mouse: ENSMUSG00000026626, Ppp2r5a, protein phosphatase 2, regulatory subunit B', alpha, [RH, Score=683, Expect=0.0]; ENSMUSG00000021051, Ppp2r5e, protein phosphatase 2, regulatory subunit B', epsilon, [RH, Score=668, Expect=0.0]} {Dmel: FBgn0027492, wdb, widerborst, [RH, Score=666, Expect=0.0]} {Celegans: WBGene00012348, pptr-1, Serine/threonine-protein phosphatase 2A regulatory subunit pptr-1, [RH, Score=647, Expect=0.0]} {Smed: dd_Smed_v6_2613_0_4, dd_Smed_v6_2613_0_4, [RH, Score=718, Expect=0.0]} {RNA1509_14734} {RNA1310_9707.1, RNA1509_14734} {RNA1509_14734, RNA815_3247.1}
10. MligTC455_04401 1087 22.65 Mlig455_044908, Mlig455_044962, Mlig455_055542

Neo: -

Age: -

Region-enriched R4: 1.584/0.03336

ARID4A 0.967 - - - 0.967 - -

Mlig455_044908 {REF} {Length: 4846} {Pfam: RBB1NT (NUC162) domain [PF08169.13, score=65.4]; ARID/BRIGHT DNA binding domain [PF01388.23, score=55.9]; RNA binding activity-knot of a chromodomain [PF11717.10, score=21.2]; PWWP domain [PF00855.19, score=19.2]} {Human: ENSG00000032219, ARID4A, AT-rich interaction domain 4A, [RH, Score=151, Expect=2e-36]} {Mouse: ENSMUSG00000048118, Arid4a, AT rich interactive domain 4A (RBP1-like), [RH, Score=151, Expect=1e-36]} {Dmel: FBgn0085451, htk, hat-trick, [RH, Score=152, Expect=9e-37]} {Celegans: WBGene00044689, arid-1, ARID (AT-rich Interactive Domain-containing protein) homolog, [RH, Score=117, Expect=3e-26]} {Smed: dd_Smed_v6_4030_0_1, dd_Smed_v6_4030_0_1, [RH, Score=175, Expect=3e-44]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_23299}

Mlig455_044962 {REF} {Length: 712} {Pfam: RBB1NT (NUC162) domain [PF08169.13, score=37.6]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_21886}

Mlig455_055542 {REF} {Length: 4763} {TRANSSPLICED} {Pfam: ARID/BRIGHT DNA binding domain [PF01388.23, score=75.5]; RBB1NT (NUC162) domain [PF08169.13, score=65.4]; RNA binding activity-knot of a chromodomain [PF11717.10, score=21.3]; PWWP domain [PF00855.19, score=19.1]} {Human: ENSG00000032219, ARID4A, AT-rich interaction domain 4A, [RH, Score=150, Expect=5e-36]} {Mouse: ENSMUSG00000048118, Arid4a, AT rich interactive domain 4A (RBP1-like), [RH, Score=150, Expect=4e-36]} {Dmel: FBgn0085451, htk, hat-trick, [RH, Score=159, Expect=7e-39]} {Celegans: WBGene00044689, arid-1, ARID (AT-rich Interactive Domain-containing protein) homolog, [RH, Score=119, Expect=8e-27]} {Smed: dd_Smed_v6_4030_0_1, dd_Smed_v6_4030_0_1, [RH, Score=206, Expect=4e-54]} {RNA1509_58139} {RNA1310_1285.1} {RNA815_21886}
11. MligTC455_51561 423 8.82 Mlig455_030638

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.130/0.02626

RMI1 0.962 - - - - - 0.962 Mlig455_030638 {REF} {Length: 2468} {TRANSSPLICED} {Pfam: RecQ mediated genome instability protein [PF08585.14, score=132.2]; Recq-mediated genome instability protein 1, C-terminal OB-fold [PF16099.7, score=70.3]} {Human: ENSG00000178966, RMI1, RecQ mediated genome instability 1, [RH, Score=121, Expect=7e-29]} {Mouse: ENSMUSG00000035367, Rmi1, RecQ mediated genome instability 1, [RH, Score=116, Expect=1e-26]} {Celegans: WBGene00011576, rmh-2, RMi1 (RMI1) Homolog, [Score=70.9, Expect=2e-12]} {Smed: dd_Smed_v6_15427_0_1, dd_Smed_v6_15427_0_1, [RH, Score=99.4, Expect=1e-21]} {RNA1509_19306} {RNA1310_8212.1} {RNA815_20681}
12. MligTC455_24229 284 5.91 Mlig455_000706

Neo: Int S/G2/M

Age: -

Regeneration-upregulated R5: 2.332

Regeneration-enriched R5: 2.332

FUBP3 0.96 - - - 0.960 - - Mlig455_000706 {REF} {Length: 4682} {Pfam: KH domain [PF00013.31, score=200.5]; KH domain [PF07650.19, score=66.2]; KH domain [PF13083.8, score=52.4]; Domain of unknown function (DUF1897) [PF09005.12, score=39.1]} {Human: ENSG00000107164, FUBP3, far upstream element binding protein 3, [Score=236, Expect=1e-68]; ENSG00000088247, KHSRP, KH-type splicing regulatory protein, [Score=229, Expect=5e-65]; ENSG00000162613, FUBP1, far upstream element binding protein 1, [Score=227, Expect=6e-65]} {Mouse: ENSMUSG00000026843, Fubp3, far upstream element (FUSE) binding protein 3, [Score=243, Expect=1e-71]} {Dmel: FBgn0014870, Psi, P-element somatic inhibitor, [Score=87.0, Expect=2e-17]} {Celegans: WBGene00007534, C12D8.1, [Score=199, Expect=8e-56]} {Smed: dd_Smed_v6_812_0_1, dd_Smed_v6_812_0_1, [Score=183, Expect=3e-50]} {RNA1509_36381, RNA1509_46962} {RNA1310_26712, RNA1509_36381} {RNA1509_36381, RNA815_3597.1}
13. MligTC455_04400 540 11.25 Mlig455_044960

Neo: -

Age: -

Region-enriched R4: 1.699/0.02809

0.954 - - - 0.954 - - Mlig455_044960 {REF} {Length: 740} {NoTransDecoderORF} {RNA1509_58139} {RNA1310_1285.1} {RNA815_30346}
14. MligTC455_42796 1039 21.65 Mlig455_007162

Neo: Int S/G2/M

Age: -

POLR3C 0.954 - - - - - 0.954 Mlig455_007162 {REF} {Length: 2368} {Pfam: RNA polymerase III subunit RPC82 [PF05645.15, score=24.4]; RNA polymerase III subunit RPC82 helix-turn-helix domain [PF08221.13, score=19.6]; TFIIE alpha subunit [PF02002.19, score=18.9]} {Human: ENSG00000186141, POLR3C, RNA polymerase III subunit C, [RH, Score=180, Expect=7e-49]} {Mouse: ENSMUSG00000028099, Polr3c, polymerase (RNA) III (DNA directed) polypeptide C, [RH, Score=182, Expect=6e-50]} {Dmel: FBgn0038057, CG12267, [RH, Score=106, Expect=7e-24]} {RNA1509_35650, RNA1509_37338, RNA1509_8125} {RNA1310_9635.1, RNA1509_35650, RNA1509_37338} {RNA1509_35650, RNA1509_37338, RNA815_3590.1}
15. MligTC455_45264 453 9.43 Mlig455_066967

Neo: Int S/G2/M

Age: -

Region-enriched R5: 1.005/0.01959

ADAR 0.952 - - - - - 0.952 Mlig455_066967 {REF} {Length: 3553} {TRANSSPLICED} {Pfam: Adenosine-deaminase (editase) domain [PF02137.20, score=89.7]} {Human: ENSG00000160710, ADAR, adenosine deaminase, RNA specific, [Score=86.7, Expect=8e-17]} {Mouse: ENSMUSG00000027951, Adar, adenosine deaminase, RNA-specific, [Score=77.4, Expect=4e-14]} {Celegans: WBGene00000079, adr-1, Adenosine Deaminase acting on RNA; Truncated ADR-1F, [Score=52.0, Expect=1e-06]} {Smed: dd_Smed_v6_4276_0_1, dd_Smed_v6_4276_0_1, [RH, Score=125, Expect=6e-30]} {RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600} {RNA1310_8055.1, RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600} {RNA1509_24132, RNA1509_25663, RNA1509_36822, RNA1509_59600, RNA815_19621}
16. MligTC455_43090 224 4.67 Mlig455_012693

Neo: -

Age: Up-Down-Up

SPAST 0.951 - - - - - 0.951 Mlig455_012693 {REF} {Length: 4302} {TRANSSPLICED} {Pfam: ATPase family associated with various cellular activities (AAA) [PF00004.31, score=127.2]; AAA+ lid domain [PF17862.3, score=38.6]; Holliday junction DNA helicase RuvB P-loop domain [PF05496.14, score=25.4]; AAA domain [PF13401.8, score=21.9]; TIP49 P-loop domain [PF06068.15, score=20.6]; IstB-like ATP binding protein [PF01695.19, score=20.2]; Bacterial TniB protein [PF05621.13, score=18.5]} {Human: ENSG00000021574, SPAST, spastin, [RH, Score=345, Expect=6e-114]} {Mouse: ENSMUSG00000024068, Spast, spastin, [RH, Score=342, Expect=9e-112]} {Dmel: FBgn0039141, spas, spastin, [RH, Score=328, Expect=2e-105]} {Celegans: WBGene00016045, spas-1, Probable spastin homolog spas-1, [RH, Score=303, Expect=1e-98]} {Smed: dd_Smed_v6_7472_0_1, dd_Smed_v6_7472_0_1, [RH, Score=322, Expect=1e-104]} {RNA1509_45741, RNA1509_60086} {RNA1310_17702, RNA1509_45741} {RNA1509_45741, RNA815_24923}

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