Data search


search
Exact
Search

Results for MligTC455_30675

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_30675 40 0.83 Mlig455_051440

Neo: -

Age: -

Mlig455_051440 {REF} {Length: 1601} {TRANSSPLICED} {RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283, RNA1509_8814} {RNA1310_24502.1, RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283} {RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283, RNA815_2563.1}

Cumulative graph for MligTC455_30675

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 0.057 1.126 0.99998 1.00000
RegionR2 -0.936 1.126 0.99984 1.00000
RegionR3 0.266 1.126 0.99999 1.00000
RegionR4 0.492 1.126 0.99992 1.00000
RegionR5 0.39 1.126 0.99997 1.00000
RegionR6 -0.423 1.126 0.99996 1.00000
RegionR7 -0.315 1.126 0.99999 1.00000
RegionR8 0.469 1.126 0.99995 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -1.292 1.126 1.00000 1.00000
RegenerationR2 3.666 1.126 0.00944 0.15524
RegenerationR3 2.239 1.126 0.20484 0.63982
RegenerationR4 2.739 1.126 0.05577 0.37924
RegenerationR5 2.942 1.126 0.04303 0.33989
RegenerationR6 4.098 1.126 0.03062 0.21846
RegenerationBL 3.094 1.126 0.15323 0.46811
RegenerationTP 1.661 1.126 0.53900 0.92537


Genes with expression patterns similar to MligTC455_30675

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_30675 40 0.83 Mlig455_051440

Neo: -

Age: -

3 - - - 1.000 1.000 1.000 Mlig455_051440 {REF} {Length: 1601} {TRANSSPLICED} {RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283, RNA1509_8814} {RNA1310_24502.1, RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283} {RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283, RNA815_2563.1}
2. MligTC455_50638 99 2.07 Mlig455_027343

Neo: -

Age: -

SSRP1 1.731 - - - 0.778 0.953 - Mlig455_027343 {REF} {Length: 2531} {TRANSSPLICED} {Pfam: POB3-like N-terminal PH domain [PF17292.4, score=82.6]; Histone chaperone Rttp106-like [PF08512.14, score=80.2]; Structure-specific recognition protein (SSRP1) [PF03531.16, score=79.1]; HMG (high mobility group) box [PF00505.21, score=75.5]; HMG-box domain [PF09011.12, score=54.7]; YABBY protein [PF04690.15, score=20.1]} {Human: ENSG00000149136, SSRP1, structure specific recognition protein 1, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000027067, Ssrp1, structure specific recognition protein 1, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0010278, Ssrp, Structure specific recognition protein, [RH, Score=444, Expect=3e-145]} {Celegans: WBGene00001973, hmg-3, FACT complex subunit ssrp1-B, [RH, Score=384, Expect=1e-122]} {Smed: dd_Smed_v6_3904_0_1, dd_Smed_v6_3904_0_1, [RH, Score=309, Expect=2e-96]} {RNA1509_24511, RNA1509_35204, RNA1509_44372, RNA1509_51872} {RNA1310_9322, RNA1509_35204, RNA1509_44372, RNA1509_51872} {RNA1509_35204, RNA1509_44372, RNA1509_51872, RNA815_4568}
3. MligTC455_30130 62 1.29 Mlig455_040669, Mlig455_068784, Mlig455_068802

Neo: Irradiation

Age: Up-Down-Down

0.967 - - - - 0.967 -

Mlig455_040669 {REF} {Length: 3166} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}

Mlig455_068784 {REF} {Length: 3176} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1, RNA1509_20007} {RNA1509_20007, RNA815_353.1}

Mlig455_068802 {REF} {Length: 3206} {TRANSSPLICED} {RNA1509_20007} {RNA1310_780.1} {RNA815_353.1}
4. MligTC455_45708 13 0.27 Mlig455_009331

Neo: -

Age: -

0.964 - - - - 0.964 - Mlig455_009331 {REF} {Length: 3871}
5. MligTC455_25585 186 3.88 Mlig455_018990, Mlig455_042225, Mlig455_042228, Mlig455_055712, Mlig455_055727

Neo: -

Age: -

LRMP 0.961 - - - - 0.961 -

Mlig455_018990 {REF} {Length: 3869} {Pfam: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=22.5]} {RNA1509_19148} {RNA1310_16173} {RNA815_20593}

Mlig455_042225 {REF} {Length: 1434} {Pfam: Leucine-rich repeats of kinetochore protein Cenp-F/LEK1 [PF10473.11, score=25.8]} {RNA1310_113381}

Mlig455_042228 {REF} {Length: 2208} {Pfam: MRVI1 protein [PF05781.14, score=32.9]} {Human: ENSG00000118308, LRMP, lymphoid restricted membrane protein, [Score=47.8, Expect=1e-05]} {RNA1509_19148} {RNA1310_16173} {RNA815_20593}

Mlig455_055712 {REF} {Length: 3372} {Pfam: MRVI1 protein [PF05781.14, score=32.5]} {Mouse: ENSMUSG00000030263, Lrmp, lymphoid-restricted membrane protein, [RH, Score=52.0, Expect=2e-06]} {RNA1509_19148} {RNA1310_16173} {RNA815_20593}

Mlig455_055727 {REF} {Length: 1453} {RNA1509_19148} {RNA1310_16173} {RNA815_20593}
6. MligTC455_16312 104 2.17 Mlig455_027412

Neo: -

Age: Up-Down-Down

0.959 - - - - 0.959 - Mlig455_027412 {REF} {Length: 5734} {Pfam: Amiloride-sensitive sodium channel [PF00858.26, score=166.2]; WSC domain [PF01822.21, score=23.4]} {Celegans: WBGene00003168, mec-4, Degenerin mec-4, [Score=57.0, Expect=5e-08]} {Smed: dd_Smed_v6_22386_0_1, dd_Smed_v6_22386_0_1, [Score=59.3, Expect=1e-09]} {RNA1509_23395} {RNA1310_12847} {RNA815_3744.1}
7. MligTC455_13740 11 0.23 Mlig455_003266

Neo: -

Age: Down-Down-Up

GLUL 0.958 - - - - - 0.958 Mlig455_003266 {REF} {Length: 2636} {Pfam: Glutamine synthetase, beta-Grasp domain [PF03951.21, score=49.3]; Glutamine synthetase, catalytic domain [PF00120.26, score=46.2]} {Human: ENSG00000135821, GLUL, glutamate-ammonia ligase, [RH, Score=520, Expect=0.0]} {Mouse: ENSMUSG00000026473, Glul, glutamate-ammonia ligase (glutamine synthetase), [RH, Score=523, Expect=0.0]} {Dmel: FBgn0001145, Gs2, Glutamine synthetase 2, [RH, Score=530, Expect=0.0]} {Celegans: WBGene00001604, gln-3, Glutamine synthetase, [RH, Score=531, Expect=0.0]} {Smed: dd_Smed_v6_646_0_1, dd_Smed_v6_646_0_1, [RH, Score=574, Expect=0.0]} {RNA1509_3029, RNA1509_56096} {RNA1310_32301, RNA1509_56096}
8. MligTC455_16589 21 0.44 Mlig455_012824

Neo: -

Age: -

0.958 - - - - 0.958 - Mlig455_012824 {REF} {Length: 1209} {NoTransDecoderORF} {RNA1509_54282} {RNA1310_73036} {RNA815_38086}
9. MligTC455_53835 678 14.12 Mlig455_038053

Neo: -

Age: -

SLC22A5 0.957 - - - - 0.957 - Mlig455_038053 {REF} {Length: 3178} {TRANSSPLICED} {Pfam: Sugar (and other) transporter [PF00083.26, score=104.5]; Major Facilitator Superfamily [PF07690.18, score=81.0]} {Human: ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [Score=186, Expect=2e-51]} {Mouse: ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=190, Expect=4e-53]; ENSMUSG00000018900, Slc22a5, solute carrier family 22 (organic cation transporter), member 5, [Score=185, Expect=2e-51]} {Dmel: FBgn0038407, CG6126, [Score=191, Expect=2e-53]} {Celegans: WBGene00003843, oct-2, Organic Cation Transporter; Organic cation transporter, [Score=169, Expect=7e-45]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [Score=179, Expect=3e-49]} {RNA1509_52412} {RNA1310_15844.1, RNA1509_52412} {RNA1509_52412, RNA815_8229.1}
10. MligTC455_12914 32 0.66 Mlig455_026496

Neo: -

Age: -

ZNF521 0.956 - - - - 0.956 - Mlig455_026496 {REF} {Length: 3383} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=54.4]; C2H2-type zinc finger [PF13894.8, score=52.8]; Zinc-finger of C2H2 type [PF12874.9, score=31.6]; Zinc-finger double domain [PF13465.8, score=19.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=19.2]; C2H2-type zinc finger [PF13912.8, score=18.7]} {Human: ENSG00000198795, ZNF521, zinc finger protein 521, [Score=77.0, Expect=1e-13]} {Mouse: ENSMUSG00000024420, Zfp521, zinc finger protein 521, [Score=75.5, Expect=3e-13]} {Dmel: FBgn0036179, CG7368, [Score=72.4, Expect=1e-12]} {Celegans: WBGene00018567, F47E1.3, [Score=61.6, Expect=2e-09]} {Smed: dd_Smed_v6_7731_0_1, dd_Smed_v6_7731_0_1, [Score=58.5, Expect=1e-09]} {RNA1310_43017} {RNA815_23872}
11. MligTC455_14458 16 0.34 Mlig455_049424

Neo: -

Age: -

0.956 - - - - 0.956 - Mlig455_049424 {REF} {Length: 829} {NoTransDecoderORF} {RNA1310_44679}
12. MligTC455_34574 74 1.54 Mlig455_017921, Mlig455_054571

Neo: -

Age: -

0.956 - - - - 0.956 -

Mlig455_017921 {REF} {Length: 1973} {Pfam: F-box-like [PF12937.9, score=41.8]; F-box domain [PF00646.35, score=39.7]} {RNA1509_43266} {RNA1310_25349.1} {RNA815_55842}

Mlig455_054571 {REF} {Length: 1950} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=41.7]; F-box domain [PF00646.35, score=39.7]} {Mouse: ENSMUSG00000020883, Fbxl20, F-box and leucine-rich repeat protein 20, [Score=49.3, Expect=3e-06]} {RNA1509_43266} {RNA1310_25349.1} {RNA815_55842}
13. MligTC455_39857 27 0.55 Mlig455_037127

Neo: -

Age: Down-Down-Down

NECAB1 0.953 - - - - 0.953 - Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367}
14. MligTC455_42092 367 7.65 Mlig455_004422, Mlig455_004425, Mlig455_037263

Neo: -

Age: Up-Down-Up

KIAA1217 0.953 - - - - 0.953 -

Mlig455_004422 {REF} {Length: 2718} {Human: ENSG00000120549, KIAA1217, KIAA1217, [Score=56.2, Expect=2e-07]} {Mouse: ENSMUSG00000036617, Etl4, enhancer trap locus 4, [Score=55.1, Expect=3e-07]; ENSMUSG00000038453, Srcin1, SRC kinase signaling inhibitor 1, [Score=52.8, Expect=2e-06]} {Dmel: FBgn0023531, CG32809, [Score=52.0, Expect=2e-06]} {RNA1310_27406} {RNA815_32070}

Mlig455_004425 {REF} {Length: 1652} {RNA1310_27406} {RNA815_32070}

Mlig455_037263 {REF} {Length: 1802} {RNA1310_27406} {RNA815_32070}
15. MligTC455_23141 252 5.24 Mlig455_007944

Neo: -

Age: Up-Down-Up

INSR 0.952 - - - - 0.952 - Mlig455_007944 {REF} {Length: 7081} {Pfam: Protein tyrosine and serine/threonine kinase [PF07714.19, score=291.8]; Protein kinase domain [PF00069.27, score=128.4]; Receptor L domain [PF01030.26, score=118.3]; Furin-like cysteine rich region [PF00757.22, score=79.0]; Fibronectin type III domain [PF00041.23, score=43.4]; Growth factor receptor domain IV [PF14843.8, score=19.7]} {Human: ENSG00000171105, INSR, insulin receptor, [RH, Score=647, Expect=0.0]} {Mouse: ENSMUSG00000005534, Insr, insulin receptor, [RH, Score=641, Expect=0.0]} {Dmel: FBgn0283499, InR, Insulin-like receptor, [RH, Score=334, Expect=6e-93]} {Celegans: WBGene00000898, daf-2, Insulin-like receptor Insulin-like receptor subunit alpha Insulin-like receptor subunit beta, [RH, Score=474, Expect=4e-140]} {Smed: dd_Smed_v6_9006_0_1, dd_Smed_v6_9006_0_1, [RH, Score=516, Expect=4e-158]} {RNA1509_5152} {RNA1310_762.1} {RNA815_285.1}
16. MligTC455_49373 49 1.03 Mlig455_000061

Neo: -

Age: -

ECT2 0.952 - - - - 0.952 - Mlig455_000061 {REF} {Length: 2785} {Pfam: RhoGEF domain [PF00621.22, score=121.5]; ZIP Zinc transporter [PF02535.24, score=20.6]} {Human: ENSG00000114346, ECT2, epithelial cell transforming 2, [Score=72.8, Expect=2e-13]} {Mouse: ENSMUSG00000027699, Ect2, ect2 oncogene, [Score=72.8, Expect=1e-13]} {Dmel: FBgn0262562, CG43102, [Score=77.4, Expect=3e-15]} {Celegans: WBGene00002297, ect-2, ECT2 (Mammalian Rho GEF) homolog, [Score=58.9, Expect=2e-09]} {Smed: dd_Smed_v6_2922_0_1, dd_Smed_v6_2922_0_1, [Score=52.8, Expect=2e-07]} {RNA1509_60002} {RNA1310_20791, RNA1509_60002} {RNA1509_60002, RNA815_13312}
17. MligTC455_06580 12 0.25 Mlig455_054623

Neo: -

Age: -

0.951 - - - - 0.951 - Mlig455_054623 {REF} {Length: 827} {RNA1509_23825} {RNA1310_29452} {RNA815_29773.1}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA