TomoSeq data search

Data search

Results for MligTC455_50638

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_50638	99	2.07	Mlig455_027343	Neo: - Age: -	SSRP1	Mlig455_027343 {REF} {Length: 2531} {TRANSSPLICED} {Pfam: POB3-like N-terminal PH domain [PF17292.4, score=82.6]; Histone chaperone Rttp106-like [PF08512.14, score=80.2]; Structure-specific recognition protein (SSRP1) [PF03531.16, score=79.1]; HMG (high mobility group) box [PF00505.21, score=75.5]; HMG-box domain [PF09011.12, score=54.7]; YABBY protein [PF04690.15, score=20.1]} {Human: ENSG00000149136, SSRP1, structure specific recognition protein 1, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000027067, Ssrp1, structure specific recognition protein 1, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0010278, Ssrp, Structure specific recognition protein, [RH, Score=444, Expect=3e-145]} {Celegans: WBGene00001973, hmg-3, FACT complex subunit ssrp1-B, [RH, Score=384, Expect=1e-122]} {Smed: dd_Smed_v6_3904_0_1, dd_Smed_v6_3904_0_1, [RH, Score=309, Expect=2e-96]} {RNA1509_24511, RNA1509_35204, RNA1509_44372, RNA1509_51872} {RNA1310_9322, RNA1509_35204, RNA1509_44372, RNA1509_51872} {RNA1509_35204, RNA1509_44372, RNA1509_51872, RNA815_4568}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_50638

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-3.558	1.994	0.99968	1.00000
RegionR2	1.495	1.994	0.27973	0.66648
RegionR3	-0.022	1.994	0.75658	1.00000
RegionR4	-0.703	1.994	0.88610	1.00000
RegionR5	2.008	1.994	0.03044	0.13086
RegionR6	1.511	1.994	0.18480	0.75025
RegionR7	-3.102	1.994	0.99959	1.00000
RegionR8	2.371	1.994	0.20063	0.79831

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	0.093	1.994	0.99998	1.00000
RegenerationR2	1.566	1.994	0.03579	0.31247
RegenerationR3	2.062	1.994	0.04425	0.36759
RegenerationR4	2.347	1.994	0.01672	0.20268
RegenerationR5	-0.352	1.994	0.62985	0.92252
RegenerationR6	1.876	1.994	0.02079	0.17874
RegenerationBL	2.578	1.994	0.05593	0.27404
RegenerationTP	0.158	1.994	0.73698	1.00000

Genes with expression patterns similar to MligTC455_50638

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_50638	99	2.07	Mlig455_027343	Neo: - Age: -	SSRP1	5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_027343 {REF} {Length: 2531} {TRANSSPLICED} {Pfam: POB3-like N-terminal PH domain [PF17292.4, score=82.6]; Histone chaperone Rttp106-like [PF08512.14, score=80.2]; Structure-specific recognition protein (SSRP1) [PF03531.16, score=79.1]; HMG (high mobility group) box [PF00505.21, score=75.5]; HMG-box domain [PF09011.12, score=54.7]; YABBY protein [PF04690.15, score=20.1]} {Human: ENSG00000149136, SSRP1, structure specific recognition protein 1, [RH, Score=557, Expect=0.0]} {Mouse: ENSMUSG00000027067, Ssrp1, structure specific recognition protein 1, [RH, Score=568, Expect=0.0]} {Dmel: FBgn0010278, Ssrp, Structure specific recognition protein, [RH, Score=444, Expect=3e-145]} {Celegans: WBGene00001973, hmg-3, FACT complex subunit ssrp1-B, [RH, Score=384, Expect=1e-122]} {Smed: dd_Smed_v6_3904_0_1, dd_Smed_v6_3904_0_1, [RH, Score=309, Expect=2e-96]} {RNA1509_24511, RNA1509_35204, RNA1509_44372, RNA1509_51872} {RNA1310_9322, RNA1509_35204, RNA1509_44372, RNA1509_51872} {RNA1509_35204, RNA1509_44372, RNA1509_51872, RNA815_4568}
2.	MligTC455_30675	40	0.83	Mlig455_051440	Neo: - Age: -		1.731	-	-	-	0.778	0.953	-	Mlig455_051440 {REF} {Length: 1601} {TRANSSPLICED} {RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283, RNA1509_8814} {RNA1310_24502.1, RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283} {RNA1509_12058, RNA1509_41146, RNA1509_41331, RNA1509_43283, RNA815_2563.1}
3.	MligTC455_20744	340	7.08	Mlig455_030472	Neo: - Age: -		1.658	-	-	-	0.708	0.950	-	Mlig455_030472 {REF} {Length: 1379} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_18800} {RNA815_24990}
4.	MligTC455_41883	85	1.77	Mlig455_012612	Neo: - Age: -	ANKRD50	0.969	-	-	-	-	-	0.969	Mlig455_012612 {REF} {Length: 7141} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=77.8]; Ankyrin repeats (many copies) [PF13637.8, score=63.2]; Ankyrin repeats (many copies) [PF13857.8, score=53.8]; Ankyrin repeat [PF13606.8, score=46.8]; Mab-21 protein [PF03281.16, score=41.3]; Ankyrin repeat [PF00023.32, score=37.7]; Helix-turn-helix domain [PF13560.8, score=18.9]} {Human: ENSG00000151458, ANKRD50, ankyrin repeat domain 50, [Score=86.3, Expect=2e-16]; ENSG00000170921, TANC2, tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2, [Score=83.6, Expect=1e-15]} {Mouse: ENSMUSG00000044864, Ankrd50, ankyrin repeat domain 50, [Score=87.4, Expect=6e-17]} {Dmel: FBgn0041096, rols, rolling pebbles, [Score=91.7, Expect=2e-18]} {Celegans: WBGene00006616, trp-4, TRP (Transient receptor potential) channel family, [Score=64.7, Expect=3e-10]} {Smed: dd_Smed_v6_6779_0_1, dd_Smed_v6_6779_0_1, [Score=89.7, Expect=5e-18]} {RNA1509_27676, RNA1509_27730} {RNA1310_22442, RNA1509_27676} {RNA1509_27676, RNA815_2426.1}
5.	MligTC455_47951	205	4.27	Mlig455_070893	Neo: - Age: -	GRID2IP	0.969	-	-	-	-	-	0.969	Mlig455_070893 {REF} {Length: 3502} {Pfam: PDZ domain [PF00595.26, score=40.9]; PDZ domain [PF17820.3, score=32.7]; PDZ domain [PF13180.8, score=22.9]; RhoGEF domain [PF00621.22, score=18.8]} {Human: ENSG00000215045, GRID2IP, Grid2 interacting protein, [Score=57.4, Expect=7e-08]} {Mouse: ENSMUSG00000022580, Rhpn1, rhophilin, Rho GTPase binding protein 1, [Score=50.4, Expect=7e-06]; ENSMUSG00000010825, Grid2ip, glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1, [Score=50.1, Expect=1e-05]} {Dmel: FBgn0264598, PsGEF, Protostome-specific GEF, [Score=78.2, Expect=2e-14]} {Smed: dd_Smed_v6_12613_0_1, dd_Smed_v6_12613_0_1, [Score=55.8, Expect=5e-08]} {RNA1509_38079} {RNA1310_16413, RNA1509_38079} {RNA1509_38079, RNA815_31333}
6.	MligTC455_22093	630	13.13	Mlig455_013083	Neo: - Age: Down-Up-Up		0.967	-	-	-	0.967	-	-	Mlig455_013083 {REF} {Length: 1654} {TRANSSPLICED} {RNA1509_31997, RNA1509_35219} {RNA1310_19259, RNA1509_31997, RNA1509_35219} {RNA1509_31997, RNA1509_35219, RNA815_14122}
7.	MligTC455_28630	190	3.95	Mlig455_062402	Neo: - Age: logFC(26M/2M)=0.419	COG1	0.964	-	-	-	-	-	0.964	Mlig455_062402 {REF} {Length: 3965} {TRANSSPLICED} {Pfam: Vps51/Vps67 [PF08700.13, score=50.7]} {Human: ENSG00000166685, COG1, component of oligomeric golgi complex 1, [RH, Score=185, Expect=1e-47]} {Mouse: ENSMUSG00000018661, Cog1, component of oligomeric golgi complex 1, [RH, Score=186, Expect=7e-48]} {Dmel: FBgn0037998, Cog1, Component of oligomeric golgi complex 1, [RH, Score=83.2, Expect=6e-16]} {Smed: dd_Smed_v6_5278_0_1, dd_Smed_v6_5278_0_1, [RH, Score=108, Expect=5e-24]} {RNA1509_40350} {RNA1310_3020} {RNA815_7633}
8.	MligTC455_39857	27	0.55	Mlig455_037127	Neo: - Age: Down-Down-Down	NECAB1	0.964	-	-	-	-	0.964	-	Mlig455_037127 {REF} {Length: 1710} {Pfam: EF-hand domain [PF13405.8, score=34.9]; EF hand [PF00036.34, score=33.1]; EF-hand domain pair [PF13499.8, score=27.6]; EF-hand domain pair [PF13833.8, score=27.3]; Antibiotic biosynthesis monooxygenase [PF03992.18, score=25.2]; EF hand [PF13202.8, score=23.2]} {Human: ENSG00000123119, NECAB1, N-terminal EF-hand calcium binding protein 1, [Score=186, Expect=7e-55]} {Mouse: ENSMUSG00000040536, Necab1, N-terminal EF-hand calcium binding protein 1, [Score=180, Expect=7e-53]} {RNA1310_5770} {RNA815_27367}
9.	MligTC455_07617	64	1.34	Mlig455_005418	Neo: - Age: -		0.963	-	-	-	0.963	-	-	Mlig455_005418 {REF} {Length: 276} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_23004} {RNA1310_2481} {RNA815_1756}
10.	MligTC455_26142	172	3.58	Mlig455_067839	Neo: - Age: -		0.961	-	-	-	-	-	0.961	Mlig455_067839 {REF} {Length: 1999} {TRANSSPLICED} {Pfam: Glycosyltransferase sugar-binding region containing DXD motif [PF04488.17, score=55.7]; Capsular polysaccharide synthesis protein [PF05704.14, score=19.8]} {Smed: dd_Smed_v6_6819_0_1, dd_Smed_v6_6819_0_1, [Score=142, Expect=6e-40]} {RNA1509_32086} {RNA1310_25663.1} {RNA815_8432}
11.	MligTC455_45410	457	9.52	Mlig455_021310	Neo: Int S/G2/M Age: Up-Down-Down	ADSS	0.957	-	-	-	-	-	0.957	Mlig455_021310 {REF} {Length: 5161} {TRANSSPLICED} {Pfam: Adenylosuccinate synthetase [PF00709.23, score=566.8]} {Human: ENSG00000035687, ADSS, adenylosuccinate synthase, [RH, Score=503, Expect=2e-176]; ENSG00000185100, ADSSL1, adenylosuccinate synthase like 1, [RH, Score=494, Expect=4e-173]} {Mouse: ENSMUSG00000015961, Adss, adenylosuccinate synthetase, non muscle, [RH, Score=504, Expect=2e-177]; ENSMUSG00000011148, Adssl1, adenylosuccinate synthetase like 1, [RH, Score=498, Expect=1e-174]} {Dmel: FBgn0027493, AdSS, Adenylosuccinate Synthetase, [RH, Score=470, Expect=5e-164]} {Celegans: WBGene00016509, adss-1, Adenylosuccinate synthetase, [RH, Score=431, Expect=8e-149]} {Smed: dd_Smed_v6_2154_0_1, dd_Smed_v6_2154_0_1, [RH, Score=504, Expect=9e-178]} {RNA1509_22607, RNA1509_31750, RNA1509_8269} {RNA1310_16344, RNA1509_22607, RNA1509_31750, RNA1509_8269} {RNA1509_22607, RNA1509_31750, RNA1509_8269, RNA815_7491}
12.	MligTC455_27688	559	11.65	Mlig455_020197	Neo: - Age: -		0.956	-	-	-	0.956	-	-	Mlig455_020197 {REF} {Length: 2249} {TRANSSPLICED} {RNA1509_26921} {RNA1310_13949} {RNA815_20428}
13.	MligTC455_06227	228	4.75	Mlig455_036666, Mlig455_036679	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_036666 {REF} {Length: 780} {RNA1310_112949} Mlig455_036679 {REF} {Length: 4100} {RNA1310_79588}
14.	MligTC455_19216	82	1.71	Mlig455_038007	Neo: Int S/G2/M Age: -		0.955	-	-	-	-	-	0.955	Mlig455_038007 {REF} {Length: 2594} {TRANSSPLICED} {RNA1509_48249} {RNA1310_31830} {RNA815_49860}
15.	MligTC455_48831	759	15.82	Mlig455_040825, Mlig455_040922	Neo: - Age: logFC(26M/2M)=0.231 Region-enriched R4: 3.032/0.00938	FBXO38	0.954	-	-	-	0.954	-	-	Mlig455_040825 {REF} {Length: 4225} {Pfam: F-box-like [PF12937.9, score=32.9]; F-box domain [PF00646.35, score=20.4]} {Human: ENSG00000145868, FBXO38, F-box protein 38, [RH, Score=256, Expect=1e-69]} {Mouse: ENSMUSG00000042211, Fbxo38, F-box protein 38, [RH, Score=253, Expect=5e-69]} {Smed: dd_Smed_v6_7155_0_1, dd_Smed_v6_7155_0_1, [RH, Score=237, Expect=1e-63]} {RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294} {RNA1310_2269.1, RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294} {RNA1509_10362, RNA1509_31016, RNA1509_55252, RNA1509_58294, RNA815_7462} Mlig455_040922 {REF} {Length: 4084} {TRANSSPLICED} {Pfam: F-box-like [PF12937.9, score=33.0]; F-box domain [PF00646.35, score=20.4]} {Human: ENSG00000145868, FBXO38, F-box protein 38, [RH, Score=257, Expect=4e-70]} {Mouse: ENSMUSG00000042211, Fbxo38, F-box protein 38, [RH, Score=254, Expect=2e-69]} {Smed: dd_Smed_v6_7155_0_1, dd_Smed_v6_7155_0_1, [RH, Score=237, Expect=6e-64]} {RNA1509_10362, RNA1509_34456} {RNA1310_2269.1, RNA1509_34456} {RNA1509_34456, RNA815_7462}
16.	MligTC455_52373	294	6.13	Mlig455_057858	Neo: - Age: -	CEP89	0.954	-	-	-	-	-	0.954	Mlig455_057858 {REF} {Length: 3159} {Pfam: Uncharacterised protein family (UPF0242) N-terminus [PF06785.13, score=24.3]} {Human: ENSG00000121289, CEP89, centrosomal protein 89, [RH, Score=113, Expect=1e-25]} {Mouse: ENSMUSG00000023072, Cep89, centrosomal protein 89, [Score=103, Expect=2e-22]} {Smed: dd_Smed_v6_13073_0_1, dd_Smed_v6_13073_0_1, [RH, Score=80.1, Expect=2e-15]} {RNA1509_10380} {RNA1310_5262.1} {RNA815_3458.1}
17.	MligTC455_20743	385	8.02	Mlig455_030435	Neo: - Age: Down-Up-Down	TNIK	0.952	-	-	-	-	0.952	-	Mlig455_030435 {REF} {Length: 6454} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=210.4]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=157.0]; ABC1 atypical kinase-like domain [PF03109.18, score=34.0]; CNH domain [PF00780.24, score=31.8]; Fungal protein kinase [PF17667.3, score=23.2]} {Human: ENSG00000154310, TNIK, TRAF2 and NCK interacting kinase, [RH, Score=504, Expect=2e-159]; ENSG00000141503, MINK1, misshapen like kinase 1, [RH, Score=482, Expect=8e-152]} {Mouse: ENSMUSG00000027692, Tnik, TRAF2 and NCK interacting kinase, [RH, Score=504, Expect=2e-160]; ENSMUSG00000020827, Mink1, misshapen-like kinase 1 (zebrafish), [RH, Score=483, Expect=3e-152]} {Dmel: FBgn0010909, msn, misshapen, [RH, Score=509, Expect=8e-161]} {Celegans: WBGene00003247, mig-15, Serine/threonine-protein kinase mig-15, [RH, Score=505, Expect=4e-163]} {Smed: dd_Smed_v6_1029_0_1, dd_Smed_v6_1029_0_1, [RH, Score=446, Expect=6e-142]} {RNA1509_35146, RNA1509_5951} {RNA1310_3546, RNA1509_35146, RNA1509_5951} {RNA1509_35146, RNA1509_5951, RNA815_6714}
18.	MligTC455_20759	29	0.61	Mlig455_010702	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_010702 {REF} {Length: 396} {NoTransDecoderORF} {RNA1509_42914} {RNA1310_102766} {RNA815_64986}
19.	MligTC455_50515	62	1.29	Mlig455_055065	Neo: - Age: - Region-enriched R4: 4.658/0.00950		0.951	-	-	-	-	-	0.951	Mlig455_055065 {REF} {Length: 1125} {NoTransDecoderORF} {RNA1310_7311} {RNA815_32403}
20.	MligTC455_43453	55	1.14	Mlig455_067444, Mlig455_069599	Neo: - Age: -		0.95	-	-	-	-	-	0.950	Mlig455_067444 {REF} {Length: 353} {NoTransDecoderORF} {RNA1509_8113} {RNA1310_2282.2} {RNA815_22369} Mlig455_069599 {REF} {Length: 380} {NoTransDecoderORF} {RNA1509_8113} {RNA1310_2282.2} {RNA815_22369}
21.	MligTC455_47235	232	4.84	Mlig455_011474	Neo: - Age: Up-Down-Down, logFC(26M/2M)=-0.498	UBASH3B	0.95	-	-	-	-	-	0.950	Mlig455_011474 {REF} {Length: 5904} {Pfam: Histidine phosphatase superfamily (branch 1) [PF00300.24, score=51.3]} {Human: ENSG00000154127, UBASH3B, ubiquitin associated and SH3 domain containing B, [RH, Score=153, Expect=2e-38]} {Mouse: ENSMUSG00000032020, Ubash3b, ubiquitin associated and SH3 domain containing, B, [RH, Score=169, Expect=5e-44]} {Dmel: FBgn0039137, CG13604, [RH, Score=120, Expect=5e-28]} {Celegans: WBGene00020321, T07F12.1, [RH, Score=116, Expect=1e-28]} {Smed: dd_Smed_v6_12024_0_1, dd_Smed_v6_12024_0_1, [RH, Score=162, Expect=4e-42]} {RNA1509_10245, RNA1509_37049} {RNA1310_4087.1, RNA1509_10245, RNA1509_37049} {RNA1509_10245, RNA1509_37049, RNA815_2334.1}
22.	MligTC455_47824	375	7.82	Mlig455_045590, Mlig455_045647	Neo: - Age: Up-Down-Down		0.95	-	-	-	-	0.950	-	Mlig455_045590 {REF} {Length: 6854} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=20.5]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574} {RNA1310_1258} {RNA815_816} Mlig455_045647 {REF} {Length: 7619} {TRANSSPLICED} {Pfam: Band 3 cytoplasmic domain [PF07565.15, score=21.6]} {Smed: dd_Smed_v6_9699_0_3, dd_Smed_v6_9699_0_3, [RH, Score=62.0, Expect=2e-09]} {RNA1509_11574, RNA1509_19895} {RNA1310_1258, RNA1509_11574, RNA1509_19895} {RNA1509_11574, RNA1509_19895, RNA815_816}