TomoSeq data search

Data search

Results for MligTC455_30851

Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Annotation
MligTC455_30851	53	1.09	Mlig455_019344, Mlig455_019558	Neo: Irradiation Age: Up-Up-Down		Mlig455_019344 {REF} {Length: 3905} {Pfam: Receptor family ligand binding region [PF01094.30, score=46.0]; Iron-containing alcohol dehydrogenase [PF13685.8, score=18.5]} {Smed: dd_Smed_v6_33317_0_2, dd_Smed_v6_33317_0_2, [Score=66.2, Expect=5e-13]} {RNA1509_10728} {RNA1310_123} {RNA815_8415.1} Mlig455_019558 {REF} {Length: 6876} {Pfam: Receptor family ligand binding region [PF01094.30, score=62.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=28.0]} {Smed: dd_Smed_v6_26870_0_1, dd_Smed_v6_26870_0_1, [Score=67.4, Expect=3e-12]} {RNA1509_10728} {RNA1310_36982} {RNA815_21318}

Cluster

Total UMI counts

Global CPM

Transcripts

Cumulative graph for MligTC455_30851

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR
RegionR1	-5.877	1.665	0.99953	1.00000
RegionR2	3.424	1.665	0.11364	0.41686
RegionR3	-0.176	1.665	0.70030	1.00000
RegionR4	1.23	1.665	0.33215	0.65031
RegionR5	-0.505	1.665	0.73429	1.00000
RegionR6	-2.258	1.665	0.99966	1.00000
RegionR7	-0.843	1.665	0.99971	1.00000
RegionR8	5.004	1.665	0.01902	0.26775

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR
RegenerationR1	4.5	1.665	0.99974	1.00000
RegenerationR2	3.067	1.665	0.02035	0.23438
RegenerationR3	4.208	1.665	0.01032	0.18616
RegenerationR4	0.404	1.665	0.63714	0.92597
RegenerationR5	2.483	1.665	0.06826	0.41070
RegenerationR6	6.591	1.665	0.00062	0.02630
RegenerationBL	3.18	1.665	0.07914	0.32870
RegenerationTP	1.655	1.665	0.42105	0.84510

Genes with expression patterns similar to MligTC455_30851

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_30851	53	1.09	Mlig455_019344, Mlig455_019558	Neo: Irradiation Age: Up-Up-Down		5	1.000	1.000	-	1.000	1.000	1.000	Mlig455_019344 {REF} {Length: 3905} {Pfam: Receptor family ligand binding region [PF01094.30, score=46.0]; Iron-containing alcohol dehydrogenase [PF13685.8, score=18.5]} {Smed: dd_Smed_v6_33317_0_2, dd_Smed_v6_33317_0_2, [Score=66.2, Expect=5e-13]} {RNA1509_10728} {RNA1310_123} {RNA815_8415.1} Mlig455_019558 {REF} {Length: 6876} {Pfam: Receptor family ligand binding region [PF01094.30, score=62.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=28.0]} {Smed: dd_Smed_v6_26870_0_1, dd_Smed_v6_26870_0_1, [Score=67.4, Expect=3e-12]} {RNA1509_10728} {RNA1310_36982} {RNA815_21318}
2.	MligTC455_52425	17	0.36	Mlig455_045695	Neo: Germline Age: -		1.837	0.960	-	-	-	-	0.877	Mlig455_045695 {REF} {Length: 1241} {RNA1509_15577, RNA1509_26551} {RNA1310_37226, RNA1509_15577, RNA1509_26551} {RNA1509_15577, RNA1509_26551, RNA815_19686}
3.	MligTC455_03734	28	0.58	Mlig455_006090	Neo: - Age: -		1.806	0.976	-	-	-	-	0.830	Mlig455_006090 {REF} {Length: 1406} {Pfam: Methyltransferase domain [PF13383.8, score=64.8]; Methyltransferase FkbM domain [PF05050.14, score=39.6]} {Smed: dd_Smed_v6_3811_0_2, dd_Smed_v6_3811_0_2, [Score=172, Expect=8e-51]} {RNA1310_105941}
4.	MligTC455_20127	36	0.76	Mlig455_058268	Neo: Germline Age: -		1.804	0.965	-	-	-	-	0.839	Mlig455_058268 {REF} {Length: 300} {NoTransDecoderORF} {RNA1509_24791} {RNA1310_59225} {RNA815_30483}
5.	MligTC455_09114	28	0.59	Mlig455_061222	Neo: - Age: - Region-enriched R4: 3.234/0.04623		1.8	-	0.953	-	-	-	0.847	Mlig455_061222 {REF} {Length: 237} {NoTransDecoderORF} {RNA1509_37401} {RNA1310_70660} {RNA815_38734}
6.	MligTC455_03654	11	0.23	Mlig455_053752	Neo: Int S/G2/M Age: -		1.771	0.816	-	-	-	-	0.955	Mlig455_053752 {REF} {Length: 1043} {RNA1509_47157} {RNA1310_21662} {RNA815_40940}
7.	MligTC455_09821	68	1.42	Mlig455_008590, Mlig455_008602	Neo: Germline Age: - Region-enriched R4: 4.607/0.00565		1.766	0.975	-	-	-	-	0.791	Mlig455_008590 {REF} {Length: 1172} {RNA1509_31992} {RNA1310_50726} {RNA815_2876.1} Mlig455_008602 {REF} {Length: 739} {RNA1509_31992} {RNA1310_31323} {RNA815_34267}
8.	MligTC455_15165	89	1.85	Mlig455_022783, Mlig455_022968	Neo: Germline Age: Up-Down-Down		1.755	0.783	-	-	-	-	0.972	Mlig455_022783 {REF} {Length: 2666} {RNA1509_18736} {RNA1310_8003} {RNA815_10990} Mlig455_022968 {REF} {Length: 2631} {RNA1509_18736} {RNA1310_8003} {RNA815_14495}
9.	MligTC455_09248	13	0.27	Mlig455_000925	Neo: - Age: -		1.754	0.958	-	-	-	-	0.796	Mlig455_000925 {REF} {Length: 1406} {RNA1509_56557} {RNA1310_11302} {RNA815_40759}
10.	MligTC455_43241	66	1.38	Mlig455_029306	Neo: Germline Age: logFC(26M/2M)=0.779	DNLZ	1.751	-	-	-	0.790	-	0.961	Mlig455_029306 {REF} {Length: 1064} {TRANSSPLICED} {Pfam: DNL zinc finger [PF05180.14, score=93.8]; Mitochondrial ATP synthase epsilon chain [PF04627.15, score=71.5]} {Human: ENSG00000213221, DNLZ, DNL-type zinc finger, [RH, Score=94.0, Expect=1e-22]} {Mouse: ENSMUSG00000075467, Dnlz, DNL-type zinc finger, [RH, Score=98.2, Expect=2e-24]} {Dmel: FBgn0030676, CG12379, [RH, Score=96.3, Expect=8e-24]} {Celegans: WBGene00018723, F53A3.7, [RH, Score=85.5, Expect=2e-20]} {Smed: dd_Smed_v6_2816_0_1, dd_Smed_v6_2816_0_1, [RH, Score=73.9, Expect=3e-16]} {RNA1509_38478, RNA1509_54873} {RNA1310_45731.2, RNA1509_54873} {RNA1509_54873, RNA815_23691}
11.	MligTC455_22296	118	2.45	Mlig455_012416	Neo: Germline Age: logFC(26M/2M)=0.555 Region-enriched R4: 3.690/0.00008	HHAT	1.739	0.952	-	-	-	-	0.787	Mlig455_012416 {REF} {Length: 2105} {Pfam: MBOAT, membrane-bound O-acyltransferase family [PF03062.21, score=54.7]} {Human: ENSG00000054392, HHAT, hedgehog acyltransferase, [RH, Score=108, Expect=6e-25]; ENSG00000280680, HHAT, hedgehog acyltransferase, [RH, Score=108, Expect=6e-25]} {Mouse: ENSMUSG00000037375, Hhat, hedgehog acyltransferase, [Score=108, Expect=1e-24]} {Dmel: FBgn0024194, rasp, [RH, Score=94.7, Expect=2e-20]} {Celegans: WBGene00013312, hhat-2, Homolog of Hedgehog AcylTransferase, [Score=89.4, Expect=1e-18]} {Smed: dd_Smed_v6_17532_0_1, dd_Smed_v6_17532_0_1, [RH, Score=74.3, Expect=5e-14]} {RNA1509_40659, RNA1509_52915} {RNA1310_27651, RNA1509_52915} {RNA1509_52915, RNA815_13162}
12.	MligTC455_11796	138	2.88	Mlig455_001870, Mlig455_001944	Neo: Germline Age: Up-Down-Down		1.713	0.961	-	-	-	-	0.752	Mlig455_001870 {REF} {Length: 1821} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=18.0]} {RNA1310_14341} {RNA815_12963} Mlig455_001944 {REF} {Length: 2646} {Pfam: Sodium:neurotransmitter symporter family [PF00209.20, score=17.7]} {RNA1310_14341} {RNA815_12963}
13.	MligTC455_19382	51	1.07	Mlig455_032372	Neo: - Age: - Region-enriched R2: 7.387/0.00125	GABBR2	1.703	0.975	-	-	-	0.728	-	Mlig455_032372 {REF} {Length: 3616} {Pfam: 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=166.5]; Receptor family ligand binding region [PF01094.30, score=93.5]} {Human: ENSG00000136928, GABBR2, gamma-aminobutyric acid type B receptor subunit 2, [Score=323, Expect=4e-95]} {Mouse: ENSMUSG00000039809, Gabbr2, gamma-aminobutyric acid (GABA) B receptor, 2, [Score=322, Expect=7e-95]} {Dmel: FBgn0027575, GABA-B-R2, metabotropic GABA-B receptor subtype 2, [Score=352, Expect=3e-104]} {Celegans: WBGene00022675, gbb-2, GABA B receptor subunit; GABAB2 receptor subunit, [Score=317, Expect=3e-94]} {Smed: dd_Smed_v6_59890_0_1, dd_Smed_v6_59890_0_1, [Score=159, Expect=1e-44]} {RNA1509_48457} {RNA1310_28999} {RNA815_30452}
14.	MligTC455_17092	44	0.92	Mlig455_043122	Neo: Germline Age: Up-Down-Down		0.971	0.971	-	-	-	-	-	Mlig455_043122 {REF} {Length: 3025} {RNA1509_10628} {RNA1310_40679} {RNA815_31259}
15.	MligTC455_16381	47	0.98	Mlig455_050273	Neo: Germline Age: logFC(26M/2M)=0.599		0.968	0.968	-	-	-	-	-	Mlig455_050273 {REF} {Length: 6292} {Smed: dd_Smed_v6_66040_0_1, dd_Smed_v6_66040_0_1, [Score=56.2, Expect=6e-08]} {RNA1509_31995} {RNA1310_2330.1} {RNA815_11819}
16.	MligTC455_40797	231	4.8	Mlig455_047822, Mlig455_047894, Mlig455_047980	Neo: Germline Age: - Region-specific R4: 6.098 Region-enriched R4: 4.232/0.00000		0.964	0.964	-	-	-	-	-	Mlig455_047822 {REF} {Length: 1631} {Pfam: Oligosaccharyltransferase subunit 5 [PF05251.14, score=19.2]} {RNA1509_45962} {RNA1310_52532, RNA1509_45962} {RNA1509_45962, RNA815_34989} Mlig455_047894 {REF} {Length: 937} {Pfam: Oligosaccharyltransferase subunit 5 [PF05251.14, score=19.2]} {RNA1509_45962} {RNA1310_52532} {RNA815_34989} Mlig455_047980 {REF} {Length: 935} {RNA1509_45962} {RNA1310_52532} {RNA815_34989}
17.	MligTC455_28287	44	0.92	Mlig455_008619	Neo: - Age: Down-Down-Up		0.962	-	-	-	0.962	-	-	Mlig455_008619 {REF} {Length: 3624} {RNA1509_41463} {RNA1310_17510.1} {RNA815_6737}
18.	MligTC455_18890	42	0.87	Mlig455_013800	Neo: - Age: Up-Down-Down		0.961	-	-	-	-	-	0.961	Mlig455_013800 {REF} {Length: 1234} {RNA1509_44733} {RNA1310_35976} {RNA815_45308}
19.	MligTC455_01644	28	0.59	Mlig455_025704	Neo: Int S/G2/M Age: -		0.959	0.959	-	-	-	-	-	Mlig455_025704 {REF} {Length: 1084} {RNA1310_25031} {RNA815_28020}
20.	MligTC455_02428	13	0.27	Mlig455_049107, Mlig455_049134	Neo: - Age: -		0.959	0.959	-	-	-	-	-	Mlig455_049107 {REF} {Length: 709} {RNA1310_75092} Mlig455_049134 {REF} {Length: 686} {Pfam: Phage integrase family [PF00589.24, score=33.1]} {RNA1310_75092}
21.	MligTC455_14471	55	1.15	Mlig455_010699, Mlig455_010803, Mlig455_010804	Neo: - Age: -	GRM8	0.958	-	-	-	-	-	0.958	Mlig455_010699 {REF} {Length: 4002} {Pfam: Receptor family ligand binding region [PF01094.30, score=203.9]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=180.5]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=32.1]; Periplasmic binding protein [PF13458.8, score=25.0]} {Human: ENSG00000179603, GRM8, glutamate metabotropic receptor 8, [Score=482, Expect=5e-156]; ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=469, Expect=4e-151]; ENSG00000198822, GRM3, glutamate metabotropic receptor 3, [Score=468, Expect=4e-151]} {Mouse: ENSMUSG00000024211, Grm8, glutamate receptor, metabotropic 8, [Score=485, Expect=2e-157]; ENSMUSG00000056755, Grm7, glutamate receptor, metabotropic 7, [Score=467, Expect=3e-150]; ENSMUSG00000003974, Grm3, glutamate receptor, metabotropic 3, [Score=465, Expect=6e-150]; ENSMUSG00000063239, Grm4, glutamate receptor, metabotropic 4, [Score=463, Expect=5e-149]} {Dmel: FBgn0050361, mtt, mangetout, [Score=723, Expect=0.0]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [Score=455, Expect=2e-146]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=416, Expect=7e-130]} {RNA1509_20706} {RNA1310_24370} {RNA815_43784} Mlig455_010803 {REF} {Length: 2479} {Pfam: Receptor family ligand binding region [PF01094.30, score=176.9]; 7 transmembrane sweet-taste receptor of 3 GCPR [PF00003.24, score=103.9]; Nine Cysteines Domain of family 3 GPCR [PF07562.16, score=32.1]; Periplasmic binding protein [PF13458.8, score=20.7]} {Human: ENSG00000179603, GRM8, glutamate metabotropic receptor 8, [Score=400, Expect=8e-126]; ENSG00000196277, GRM7, glutamate metabotropic receptor 7, [Score=380, Expect=2e-118]} {Mouse: ENSMUSG00000024211, Grm8, glutamate receptor, metabotropic 8, [Score=402, Expect=7e-127]} {Dmel: FBgn0050361, mtt, mangetout, [Score=614, Expect=0.0]} {Celegans: WBGene00003232, mgl-1, Probable metabotropic glutamate receptor mgl-1, [Score=370, Expect=2e-115]} {Smed: dd_Smed_v6_15419_0_1, dd_Smed_v6_15419_0_1, [Score=341, Expect=8e-103]} {RNA1310_22509} {RNA815_43784} Mlig455_010804 {REF} {Length: 1068} {RNA1509_20706} {RNA1310_148281} {RNA815_35178}
22.	MligTC455_43705	5	0.11	Mlig455_040763	Neo: - Age: -		0.957	0.957	-	-	-	-	-	Mlig455_040763 {REF} {Length: 947} {NoTransDecoderORF} {RNA1509_18246} {RNA1310_103903.1} {RNA815_53541}
23.	MligTC455_16379	39	0.82	Mlig455_040330	Neo: Int S/G2/M Age: -		0.956	0.956	-	-	-	-	-	Mlig455_040330 {REF} {Length: 1065} {RNA1509_31995} {RNA1310_2330.3} {RNA815_34872}
24.	MligTC455_34441	137	2.86	Mlig455_068430	Neo: - Age: -		0.956	-	0.956	-	-	-	-	Mlig455_068430 {REF} {Length: 1220} {TRANSSPLICED} {RNA1509_17312} {RNA1310_9887.2} {RNA815_30931}
25.	MligTC455_36499	3	0.06	Mlig455_033924	Neo: - Age: -		0.955	-	-	-	-	-	0.955	Mlig455_033924 {REF} {Length: 1269} {RNA1509_29923} {RNA1310_121998} {RNA815_50807}
26.	MligTC455_34442	293	6.1	Mlig455_038739, Mlig455_041314	Neo: Irradiation Age: -		0.953	-	0.953	-	-	-	-	Mlig455_038739 {REF} {Length: 2011} {TRANSSPLICED} {RNA1509_17312} {RNA1310_9887.2} {RNA815_7355} Mlig455_041314 {REF} {Length: 2021} {RNA1509_17312} {RNA1310_9887.1} {RNA815_30931}
27.	MligTC455_10988	74	1.55	Mlig455_004717	Neo: - Age: -		0.95	0.950	-	-	-	-	-	Mlig455_004717 {REF} {Length: 1082} {RNA1509_31347} {RNA1310_47669} {RNA815_27018}