Data search
Results for MligTC455_34442
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_34442 | 293 | 6.10 | Mlig455_038739, Mlig455_041314 | Neo: Irradiation Age: - |
Mlig455_038739 {REF} {Length: 2011} {TRANSSPLICED} {RNA1509_17312} {RNA1310_9887.2} {RNA815_7355} Mlig455_041314 {REF} {Length: 2021} {RNA1509_17312} {RNA1310_9887.1} {RNA815_30931} |
Cumulative graph for MligTC455_34442
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.732 | 3.25 | 0.62130 | 1.00000 | |
| RegionR2 | 0.335 | 3.25 | 0.64110 | 0.97871 | |
| RegionR3 | -0.499 | 3.25 | 0.41581 | 0.94099 | |
| RegionR4 | 1.144 | 3.25 | 0.03641 | 0.15561 | |
| RegionR5 | 0.663 | 3.25 | 0.16038 | 0.42159 | |
| RegionR6 | -0.977 | 3.25 | 0.14081 | 0.67324 | |
| RegionR7 | 0.291 | 3.25 | 0.70241 | 1.00000 | |
| RegionR8 | -0.225 | 3.25 | 0.83227 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.44 | 3.25 | 0.83056 | 1.00000 | |
| RegenerationR2 | 0.092 | 3.25 | 0.87076 | 1.00000 | |
| RegenerationR3 | 1.501 | 3.25 | 0.01673 | 0.23663 | |
| RegenerationR4 | 0.162 | 3.25 | 0.76949 | 0.97663 | |
| RegenerationR5 | 0.259 | 3.25 | 0.61579 | 0.91678 | |
| RegenerationR6 | 0.661 | 3.25 | 0.35661 | 0.70138 | |
| RegenerationBL | 0.745 | 3.25 | 0.33777 | 0.70416 | |
| RegenerationTP | -1.711 | 3.25 | 0.14135 | 0.56054 |
Genes with expression patterns similar to MligTC455_34442
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_34442 | 293 | 6.1 | Mlig455_038739, Mlig455_041314 | Neo: Irradiation Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_038739 {REF} {Length: 2011} {TRANSSPLICED} {RNA1509_17312} {RNA1310_9887.2} {RNA815_7355} Mlig455_041314 {REF} {Length: 2021} {RNA1509_17312} {RNA1310_9887.1} {RNA815_30931} |
|
| 2. | MligTC455_34441 | 137 | 2.86 | Mlig455_068430 | Neo: - Age: - |
5.83 | 0.994 | 0.996 | 0.966 | 0.961 | 0.925 | 0.988 | Mlig455_068430 {REF} {Length: 1220} {TRANSSPLICED} {RNA1509_17312} {RNA1310_9887.2} {RNA815_30931} | |
| 3. | MligTC455_30851 | 53 | 1.09 | Mlig455_019344, Mlig455_019558 | Neo: Irradiation Age: Up-Up-Down |
0.953 | - | 0.953 | - | - | - | - | Mlig455_019344 {REF} {Length: 3905} {Pfam: Receptor family ligand binding region [PF01094.30, score=46.0]; Iron-containing alcohol dehydrogenase [PF13685.8, score=18.5]} {Smed: dd_Smed_v6_33317_0_2, dd_Smed_v6_33317_0_2, [Score=66.2, Expect=5e-13]} {RNA1509_10728} {RNA1310_123} {RNA815_8415.1} Mlig455_019558 {REF} {Length: 6876} {Pfam: Receptor family ligand binding region [PF01094.30, score=62.5]; Ligated ion channel L-glutamate- and glycine-binding site [PF10613.11, score=41.9]; Iron-containing alcohol dehydrogenase [PF13685.8, score=28.0]} {Smed: dd_Smed_v6_26870_0_1, dd_Smed_v6_26870_0_1, [Score=67.4, Expect=3e-12]} {RNA1509_10728} {RNA1310_36982} {RNA815_21318} |
Berezikov Lab - 2020-2021 © ERIBA