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Results for MligTC455_31028

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_31028 16654 346.96 Mlig455_025152

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.616

 RPL17 Mlig455_025152 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Ribosomal protein L22p/L17e [PF00237.21, score=133.1]} {Human: ENSG00000265681, RPL17, ribosomal protein L17, [RH, Score=241, Expect=1e-81]; ENSG00000215472, RPL17-C18orf32, RPL17-C18orf32 readthrough, [RH, Score=238, Expect=2e-79]} {Mouse: ENSMUSG00000062328, Rpl17, ribosomal protein L17, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0029897, RpL17, Ribosomal protein L17, [RH, Score=238, Expect=2e-80]} {Celegans: WBGene00004429, rpl-17, 60S ribosomal protein L17, [RH, Score=243, Expect=2e-82]} {Smed: dd_Smed_v6_95_0_1, dd_Smed_v6_95_0_1, [RH, Score=241, Expect=1e-81]} {RNA1509_291} {RNA1310_45129, RNA1509_291} {RNA1509_291, RNA815_22534}

Cumulative graph for MligTC455_31028

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -1.291 8.523 0.00064 0.08440
RegionR2 -0.339 8.523 0.21844 0.58659
RegionR3 0.29 8.523 0.21319 0.75398
RegionR4 0.616 8.523 0.01719 0.09147
RegionR5 0.422 8.523 0.06174 0.21771
RegionR6 0.23 8.523 0.32524 0.91365
RegionR7 0.276 8.523 0.23300 0.85720
RegionR8 -0.203 8.523 0.44255 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 -0.166 8.523 0.72964 1.00000
RegenerationR2 -0.373 8.523 0.21005 0.65720
RegenerationR3 -0.33 8.523 0.27687 0.71033
RegenerationR4 -0.263 8.523 0.39454 0.81005
RegenerationR5 -0.526 8.523 0.07919 0.43829
RegenerationR6 -0.174 8.523 0.56572 0.84886
RegenerationBL 0.002 8.523 0.99458 1.00000
RegenerationTP 0.044 8.523 0.87672 1.00000


Genes with expression patterns similar to MligTC455_31028

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_31028 16654 346.96 Mlig455_025152

Neo: -

Age: Down-Up-Up, logFC(26M/2M)=0.616

 RPL17 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_025152 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Ribosomal protein L22p/L17e [PF00237.21, score=133.1]} {Human: ENSG00000265681, RPL17, ribosomal protein L17, [RH, Score=241, Expect=1e-81]; ENSG00000215472, RPL17-C18orf32, RPL17-C18orf32 readthrough, [RH, Score=238, Expect=2e-79]} {Mouse: ENSMUSG00000062328, Rpl17, ribosomal protein L17, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0029897, RpL17, Ribosomal protein L17, [RH, Score=238, Expect=2e-80]} {Celegans: WBGene00004429, rpl-17, 60S ribosomal protein L17, [RH, Score=243, Expect=2e-82]} {Smed: dd_Smed_v6_95_0_1, dd_Smed_v6_95_0_1, [RH, Score=241, Expect=1e-81]} {RNA1509_291} {RNA1310_45129, RNA1509_291} {RNA1509_291, RNA815_22534}
2. MligTC455_31029 16553 344.86 Mlig455_063914

Neo: Int S/G2/M

Age: logFC(26M/2M)=2.797

 RPL17 5.98 1.000 1.000 0.998 0.999 1.000 0.983 Mlig455_063914 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Ribosomal protein L22p/L17e [PF00237.21, score=133.1]} {Human: ENSG00000265681, RPL17, ribosomal protein L17, [RH, Score=241, Expect=1e-81]; ENSG00000215472, RPL17-C18orf32, RPL17-C18orf32 readthrough, [RH, Score=238, Expect=2e-79]} {Mouse: ENSMUSG00000062328, Rpl17, ribosomal protein L17, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0029897, RpL17, Ribosomal protein L17, [RH, Score=238, Expect=2e-80]} {Celegans: WBGene00004429, rpl-17, 60S ribosomal protein L17, [RH, Score=243, Expect=2e-82]} {Smed: dd_Smed_v6_95_0_1, dd_Smed_v6_95_0_1, [RH, Score=241, Expect=1e-81]} {RNA1509_291} {RNA1310_45129} {RNA815_22534}
3. MligTC455_25837 12710 264.79 Mlig455_021542

Neo: Int S/G2/M

Age: Down-Up-Up

 RPL23A 2.598 0.886 - - - 0.974 0.738 Mlig455_021542 {REF} {Length: 761} {Pfam: Ribosomal protein L23 [PF00276.22, score=56.0]; Ribosomal protein L23, N-terminal domain [PF03939.15, score=54.3]} {Human: ENSG00000198242, RPL23A, ribosomal protein L23a, [RH, Score=173, Expect=2e-55]} {Mouse: ENSMUSG00000058546, Rpl23a, ribosomal protein L23A, [RH, Score=169, Expect=2e-54]} {Dmel: FBgn0026372, RpL23A, Ribosomal protein L23A, [RH, Score=168, Expect=2e-52]} {Celegans: WBGene00004438, rpl-25.1, 60S ribosomal protein L23a 1, [RH, Score=157, Expect=8e-50]} {Smed: dd_Smed_v6_281_0_1, dd_Smed_v6_281_0_1, [RH, Score=156, Expect=1e-49]} {RNA1509_661} {RNA1310_50846} {RNA815_24696}
4. MligTC455_39535 136 2.82 Mlig455_001450

Neo: -

Age: logFC(26M/2M)=-0.580

 HOXD3 0.984 - - - - 0.984 - Mlig455_001450 {REF} {Length: 2041} {Pfam: Homeodomain [PF00046.31, score=77.8]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=130, Expect=3e-34]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=128, Expect=1e-34]; ENSG00000105997, HOXA3, homeobox A3, [RH, Score=127, Expect=5e-33]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=130, Expect=2e-34]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=128, Expect=1e-33]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=127, Expect=2e-33]} {Dmel: FBgn0000439, Dfd, Deformed, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=91.7, Expect=1e-21]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [RH, Score=116, Expect=2e-30]} {RNA1509_47271} {RNA1310_25878, RNA1509_47271} {RNA1509_47271, RNA815_41199}

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