TomoSeq data search

Data search

Results for MligTC455_31029

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31029

16553

344.86

Mlig455_063914

Neo: Int S/G2/M

Age: logFC(26M/2M)=2.797

RPL17

Mlig455_063914 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Ribosomal protein L22p/L17e [PF00237.21, score=133.1]} {Human: ENSG00000265681, RPL17, ribosomal protein L17, [RH, Score=241, Expect=1e-81]; ENSG00000215472, RPL17-C18orf32, RPL17-C18orf32 readthrough, [RH, Score=238, Expect=2e-79]} {Mouse: ENSMUSG00000062328, Rpl17, ribosomal protein L17, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0029897, RpL17, Ribosomal protein L17, [RH, Score=238, Expect=2e-80]} {Celegans: WBGene00004429, rpl-17, 60S ribosomal protein L17, [RH, Score=243, Expect=2e-82]} {Smed: dd_Smed_v6_95_0_1, dd_Smed_v6_95_0_1, [RH, Score=241, Expect=1e-81]} {RNA1509_291} {RNA1310_45129} {RNA815_22534}

Cumulative graph for MligTC455_31029

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-1.287	8.519	0.00075	0.09279
RegionR2	-0.342	8.519	0.21930	0.58746
RegionR3	0.287	8.519	0.22159	0.76387
RegionR4	0.623	8.519	0.01700	0.09073
RegionR5	0.416	8.519	0.06832	0.23399
RegionR6	0.229	8.519	0.33111	0.91943
RegionR7	0.282	8.519	0.22770	0.84917
RegionR8	-0.207	8.519	0.43751	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	-0.21	8.519	0.66707	1.00000
RegenerationR2	-0.37	8.519	0.21794	0.66536
RegenerationR3	-0.325	8.519	0.28829	0.72038
RegenerationR4	-0.272	8.519	0.38420	0.80386
RegenerationR5	-0.527	8.519	0.08105	0.44262
RegenerationR6	-0.193	8.519	0.52685	0.82471
RegenerationBL	0.004	8.519	0.98899	1.00000
RegenerationTP	0.052	8.519	0.85576	1.00000

Genes with expression patterns similar to MligTC455_31029

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31029	16553	344.86	Mlig455_063914	Neo: Int S/G2/M Age: logFC(26M/2M)=2.797	RPL17	6	1.000	1.000	1.000	1.000	1.000	1.000	Mlig455_063914 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Ribosomal protein L22p/L17e [PF00237.21, score=133.1]} {Human: ENSG00000265681, RPL17, ribosomal protein L17, [RH, Score=241, Expect=1e-81]; ENSG00000215472, RPL17-C18orf32, RPL17-C18orf32 readthrough, [RH, Score=238, Expect=2e-79]} {Mouse: ENSMUSG00000062328, Rpl17, ribosomal protein L17, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0029897, RpL17, Ribosomal protein L17, [RH, Score=238, Expect=2e-80]} {Celegans: WBGene00004429, rpl-17, 60S ribosomal protein L17, [RH, Score=243, Expect=2e-82]} {Smed: dd_Smed_v6_95_0_1, dd_Smed_v6_95_0_1, [RH, Score=241, Expect=1e-81]} {RNA1509_291} {RNA1310_45129} {RNA815_22534}
2.	MligTC455_31028	16654	346.96	Mlig455_025152	Neo: - Age: Down-Up-Up, logFC(26M/2M)=0.616	RPL17	5.98	1.000	1.000	0.998	0.999	1.000	0.983	Mlig455_025152 {REF} {Length: 775} {TRANSSPLICED} {Pfam: Ribosomal protein L22p/L17e [PF00237.21, score=133.1]} {Human: ENSG00000265681, RPL17, ribosomal protein L17, [RH, Score=241, Expect=1e-81]; ENSG00000215472, RPL17-C18orf32, RPL17-C18orf32 readthrough, [RH, Score=238, Expect=2e-79]} {Mouse: ENSMUSG00000062328, Rpl17, ribosomal protein L17, [RH, Score=236, Expect=1e-79]} {Dmel: FBgn0029897, RpL17, Ribosomal protein L17, [RH, Score=238, Expect=2e-80]} {Celegans: WBGene00004429, rpl-17, 60S ribosomal protein L17, [RH, Score=243, Expect=2e-82]} {Smed: dd_Smed_v6_95_0_1, dd_Smed_v6_95_0_1, [RH, Score=241, Expect=1e-81]} {RNA1509_291} {RNA1310_45129, RNA1509_291} {RNA1509_291, RNA815_22534}
3.	MligTC455_25837	12710	264.79	Mlig455_021542	Neo: Int S/G2/M Age: Down-Up-Up	RPL23A	2.661	0.885	-	-	-	0.975	0.801	Mlig455_021542 {REF} {Length: 761} {Pfam: Ribosomal protein L23 [PF00276.22, score=56.0]; Ribosomal protein L23, N-terminal domain [PF03939.15, score=54.3]} {Human: ENSG00000198242, RPL23A, ribosomal protein L23a, [RH, Score=173, Expect=2e-55]} {Mouse: ENSMUSG00000058546, Rpl23a, ribosomal protein L23A, [RH, Score=169, Expect=2e-54]} {Dmel: FBgn0026372, RpL23A, Ribosomal protein L23A, [RH, Score=168, Expect=2e-52]} {Celegans: WBGene00004438, rpl-25.1, 60S ribosomal protein L23a 1, [RH, Score=157, Expect=8e-50]} {Smed: dd_Smed_v6_281_0_1, dd_Smed_v6_281_0_1, [RH, Score=156, Expect=1e-49]} {RNA1509_661} {RNA1310_50846} {RNA815_24696}
4.	MligTC455_48371	359	7.48	Mlig455_050070	Neo: - Age: Up-Down-Up Region-enriched R5: 1.633/0.03123	CCDC25	1.672	-	-	-	0.719	0.953	-	Mlig455_050070 {REF} {Length: 754} {TRANSSPLICED} {Pfam: NFACT protein RNA binding domain [PF05670.15, score=113.0]; Secretory protein of YscJ/FliF family [PF01514.19, score=19.4]} {Human: ENSG00000147419, CCDC25, coiled-coil domain containing 25, [Score=175, Expect=2e-55]} {Mouse: ENSMUSG00000022035, Ccdc25, coiled-coil domain containing 25, [Score=177, Expect=1e-56]} {Dmel: FBgn0029929, CG4593, [Score=197, Expect=2e-64]} {Celegans: WBGene00013213, Y54G11A.2, [Score=178, Expect=4e-57]} {Smed: dd_Smed_v6_4506_0_1, dd_Smed_v6_4506_0_1, [Score=207, Expect=1e-68]} {RNA1509_7308} {RNA1310_42614} {RNA815_21229}
5.	MligTC455_39535	136	2.82	Mlig455_001450	Neo: - Age: logFC(26M/2M)=-0.580	HOXD3	0.985	-	-	-	-	0.985	-	Mlig455_001450 {REF} {Length: 2041} {Pfam: Homeodomain [PF00046.31, score=77.8]} {Human: ENSG00000128652, HOXD3, homeobox D3, [RH, Score=130, Expect=3e-34]; ENSG00000120093, HOXB3, homeobox B3, [RH, Score=128, Expect=1e-34]; ENSG00000105997, HOXA3, homeobox A3, [RH, Score=127, Expect=5e-33]} {Mouse: ENSMUSG00000079277, Hoxd3, homeobox D3, [RH, Score=130, Expect=2e-34]; ENSMUSG00000079560, Hoxa3, homeobox A3, [RH, Score=128, Expect=1e-33]; ENSMUSG00000048763, Hoxb3, homeobox B3, [RH, Score=127, Expect=2e-33]} {Dmel: FBgn0000439, Dfd, Deformed, [RH, Score=108, Expect=4e-26]} {Celegans: WBGene00003024, lin-39, Homeobox protein lin-39, [Score=91.7, Expect=1e-21]} {Smed: dd_Smed_v6_22992_0_1, dd_Smed_v6_22992_0_1, [RH, Score=116, Expect=2e-30]} {RNA1509_47271} {RNA1310_25878, RNA1509_47271} {RNA1509_47271, RNA815_41199}

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