Data search
Results for MligTC455_31112
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31112 | 228 | 4.74 | Mlig455_037442 | Neo: - Age: - |
Mlig455_037442 {REF} {Length: 3877} {Pfam: EGF-like domain [PF07974.15, score=19.0]} {RNA1509_9418} {RNA1310_2624} {RNA815_768.1} |
Cumulative graph for MligTC455_31112
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.987 | 3.102 | 0.65268 | 1.00000 | |
| RegionR2 | -0.753 | 3.102 | 0.97263 | 1.00000 | |
| RegionR3 | 2.222 | 3.102 | 0.02057 | 0.24095 | |
| RegionR4 | 2.182 | 3.102 | 0.08454 | 0.27499 | |
| RegionR5 | 1.472 | 3.102 | 0.09293 | 0.29047 | |
| RegionR6 | -0.325 | 3.102 | 0.90885 | 1.00000 | |
| RegionR7 | -1.741 | 3.102 | 0.99816 | 1.00000 | |
| RegionR8 | -4.044 | 3.102 | 0.26865 | 0.89179 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -6.142 | 3.102 | 0.33402 | 1.00000 | |
| RegenerationR2 | 0.191 | 3.102 | 0.83729 | 1.00000 | |
| RegenerationR3 | -1.204 | 3.102 | 0.15627 | 0.58731 | |
| RegenerationR4 | -1.3 | 3.102 | 0.17957 | 0.61944 | |
| RegenerationR5 | -1.051 | 3.102 | 0.19880 | 0.63142 | |
| RegenerationR6 | 0.362 | 3.102 | 0.75124 | 0.95277 | |
| RegenerationBL | 0.183 | 3.102 | 0.75786 | 1.00000 | |
| RegenerationTP | -0.068 | 3.102 | 0.82237 | 1.00000 |
Genes with expression patterns similar to MligTC455_31112
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31112 | 228 | 4.74 | Mlig455_037442 | Neo: - Age: - |
6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_037442 {REF} {Length: 3877} {Pfam: EGF-like domain [PF07974.15, score=19.0]} {RNA1509_9418} {RNA1310_2624} {RNA815_768.1} | |
| 2. | MligTC455_30059 | 146 | 3.03 | Mlig455_037493 | Neo: - Age: Down-Up-Down |
5.415 | 0.954 | 0.887 | 0.808 | 0.967 | 0.982 | 0.817 | Mlig455_037493 {REF} {Length: 1507} {Pfam: EGF-like domain [PF07974.15, score=26.0]} {RNA1509_9418} {RNA1310_2624} {RNA815_768.1} | |
| 3. | MligTC455_53528 | 378 | 7.87 | Mlig455_040364 | Neo: - Age: logFC(26M/2M)=0.734 Region-enriched R4: 3.457/0.00234 |
2.703 | - | 0.967 | - | 0.851 | - | 0.885 | Mlig455_040364 {REF} {Length: 1576} {TRANSSPLICED} {Pfam: Universal stress protein family [PF00582.28, score=97.2]} {Smed: dd_Smed_v6_985_0_1, dd_Smed_v6_985_0_1, [RH, Score=119, Expect=9e-35]} {RNA1509_7232} {RNA1310_49135, RNA1509_7232} {RNA1509_7232, RNA815_18182.1} | |
| 4. | MligTC455_51773 | 777 | 16.19 | Mlig455_035194 | Neo: - Age: Up-Up-Down Region-enriched R3: 2.249/0.00476 |
HDHD5 | 1.798 | - | - | - | 0.953 | - | 0.845 | Mlig455_035194 {REF} {Length: 2471} {Pfam: Haloacid dehalogenase-like hydrolase [PF13344.8, score=55.8]; HAD-hyrolase-like [PF13242.8, score=33.6]} {Human: ENSG00000069998, HDHD5, haloacid dehalogenase like hydrolase domain containing 5, [RH, Score=306, Expect=2e-100]} {Mouse: ENSMUSG00000058979, Hdhd5, haloacid dehalogenase like hydrolase domain containing 5, [RH, Score=286, Expect=9e-93]} {Celegans: WBGene00019255, H32C10.1, [RH, Score=208, Expect=8e-63]} {Smed: dd_Smed_v6_1170_0_1, dd_Smed_v6_1170_0_1, [RH, Score=430, Expect=3e-149]} {RNA1509_3838} {RNA1310_5353.1, RNA1509_3838} {RNA1509_3838, RNA815_4360} |
| 5. | MligTC455_12594 | 160 | 3.32 | Mlig455_065680 | Neo: - Age: - Region-specific R5: 4.672 Region-enriched R5: 3.553/0.00000 |
TMPRSS6 | 1.714 | - | - | - | 0.978 | 0.736 | - | Mlig455_065680 {REF} {Length: 2657} {Pfam: Trypsin [PF00089.28, score=246.4]; Low-density lipoprotein receptor domain class A [PF00057.20, score=65.1]; CUB domain [PF00431.22, score=65.0]; Trypsin-like peptidase domain [PF13365.8, score=29.0]; Domain of unknown function (DUF1986) [PF09342.13, score=24.6]} {Human: ENSG00000187045, TMPRSS6, transmembrane serine protease 6, [Score=223, Expect=1e-63]} {Mouse: ENSMUSG00000016942, Tmprss6, transmembrane serine protease 6, [RH, Score=225, Expect=8e-65]} {Dmel: FBgn0042098, CG18735, [RH, Score=185, Expect=2e-53]} {Celegans: WBGene00006619, try-1, TRYpsin-like protease, [RH, Score=165, Expect=7e-47]} {Smed: dd_Smed_v6_790_0_1, dd_Smed_v6_790_0_1, [Score=179, Expect=3e-48]} {RNA1509_27528, RNA1509_47790} {RNA1310_12212.1, RNA1509_47790} {RNA1509_47790, RNA815_13365} |
| 6. | MligTC455_53484 | 40 | 0.82 | Mlig455_036835 | Neo: - Age: Down-Up-Down |
0.993 | - | - | - | 0.993 | - | - | Mlig455_036835 {REF} {Length: 1128} {RNA1509_45864} {RNA1310_3774, RNA1509_45864} {RNA1509_45864, RNA815_2602} | |
| 7. | MligTC455_42684 | 96 | 2 | Mlig455_065317 | Neo: - Age: Down-Up-Down |
SLC22A3 | 0.982 | - | - | - | - | 0.982 | - | Mlig455_065317 {REF} {Length: 3884} {Pfam: Sugar (and other) transporter [PF00083.26, score=106.5]; Major Facilitator Superfamily [PF07690.18, score=102.9]} {Human: ENSG00000146477, SLC22A3, solute carrier family 22 member 3, [RH, Score=310, Expect=3e-98]; ENSG00000197375, SLC22A5, solute carrier family 22 member 5, [RH, Score=308, Expect=1e-97]; ENSG00000172940, SLC22A13, solute carrier family 22 member 13, [RH, Score=297, Expect=3e-93]} {Mouse: ENSMUSG00000023828, Slc22a3, solute carrier family 22 (organic cation transporter), member 3, [RH, Score=322, Expect=3e-103]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [RH, Score=377, Expect=1e-124]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [RH, Score=289, Expect=3e-90]} {Smed: dd_Smed_v6_10826_0_2, dd_Smed_v6_10826_0_2, [RH, Score=261, Expect=4e-80]} {RNA1509_7807} {RNA1310_8912} {RNA815_6870} |
| 8. | MligTC455_10974 | 149 | 3.11 | Mlig455_067448 | Neo: Germline Age: - |
REC8 | 0.973 | - | - | - | 0.973 | - | - | Mlig455_067448 {REF} {Length: 2847} {TRANSSPLICED} {Pfam: N terminus of Rad21 / Rec8 like protein [PF04825.15, score=47.4]; Conserved region of Rad21 / Rec8 like protein [PF04824.18, score=40.1]} {Human: ENSG00000285007, REC8, REC8 meiotic recombination protein, [RH, Score=53.5, Expect=1e-06]; ENSG00000100918, REC8, REC8 meiotic recombination protein, [RH, Score=53.5, Expect=1e-06]} {Mouse: ENSMUSG00000002324, Rec8, REC8 meiotic recombination protein, [RH, Score=52.0, Expect=2e-06]} {Smed: dd_Smed_v6_15392_0_10, dd_Smed_v6_15392_0_10, [RH, Score=65.1, Expect=9e-13]} {RNA1509_34057} {RNA1310_5775, RNA1509_34057} {RNA1509_34057, RNA815_8912} |
| 9. | MligTC455_16611 | 60 | 1.24 | Mlig455_056028 | Neo: Irradiation Age: Up-Down-Down Region-enriched R4: 5.455/0.00196 |
0.971 | - | - | - | 0.971 | - | - | Mlig455_056028 {REF} {Length: 2245} {RNA1509_30958, RNA1509_4419, RNA1509_44911, RNA1509_45307, RNA1509_8207} {RNA1310_17568, RNA1509_30958, RNA1509_4419, RNA1509_44911, RNA1509_45307, RNA1509_8207} {RNA1509_30958, RNA1509_4419, RNA1509_44911, RNA1509_45307, RNA1509_8207, RNA815_7637} | |
| 10. | MligTC455_39814 | 17 | 0.35 | Mlig455_051814 | Neo: - Age: - |
0.96 | - | - | - | 0.960 | - | - | Mlig455_051814 {REF} {Length: 1986} {NoTransDecoderORF} {RNA1310_67241} {RNA815_26250.1} | |
| 11. | MligTC455_26287 | 21 | 0.43 | Mlig455_030682 | Neo: - Age: logFC(26M/2M)=1.428 |
RARRES3 | 0.959 | - | - | - | - | - | 0.959 | Mlig455_030682 {REF} {Length: 1202} {Pfam: Lecithin retinol acyltransferase [PF04970.15, score=64.4]} {Human: ENSG00000133321, RARRES3, retinoic acid receptor responder 3, [Score=65.9, Expect=6e-13]} {Mouse: ENSMUSG00000022525, Hrasls, HRAS-like suppressor, [RH, Score=58.5, Expect=2e-10]; ENSMUSG00000060675, Pla2g16, phospholipase A2, group XVI, [RH, Score=58.2, Expect=2e-10]} {RNA1310_36500.1} {RNA815_19807} |
| 12. | MligTC455_50898 | 26 | 0.55 | Mlig455_053568 | Neo: - Age: - Region-enriched R4: 5.983/0.00107 |
0.958 | - | - | - | 0.958 | - | - | Mlig455_053568 {REF} {Length: 1320} {RNA1509_27480} {RNA1310_54225} {RNA815_31675} | |
| 13. | MligTC455_23651 | 136 | 2.83 | Mlig455_007003 | Neo: Int S/G2/M Age: - |
0.957 | - | - | - | - | 0.957 | - | Mlig455_007003 {REF} {Length: 1714} {Pfam: Cell cycle regulatory protein [PF11357.10, score=25.1]} {RNA1509_12112} {RNA1310_23429} {RNA815_41785} | |
| 14. | MligTC455_40706 | 460 | 9.58 | Mlig455_052689 | Neo: - Age: - Region-enriched R5: 1.217/0.04116 |
CCDC174 | 0.954 | - | - | - | - | 0.954 | - | Mlig455_052689 {REF} {Length: 1095} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4078) [PF13300.8, score=45.4]} {Human: ENSG00000154781, CCDC174, coiled-coil domain containing 174, [Score=50.8, Expect=2e-06]} {RNA1509_19175} {RNA1310_28722, RNA1509_19175} {RNA1509_19175, RNA815_14570} |
Berezikov Lab - 2020-2021 © ERIBA