Data search


search
Exact
Search

Results for MligTC455_39814

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_39814 17 0.35 Mlig455_051814

Neo: -

Age: -

Mlig455_051814 {REF} {Length: 1986} {NoTransDecoderORF} {RNA1310_67241} {RNA815_26250.1}

Cumulative graph for MligTC455_39814

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 - - - -
RegionR2 - - - -
RegionR3 - - - -
RegionR4 - - - -
RegionR5 - - - -
RegionR6 - - - -
RegionR7 - - - -
RegionR8 - - - -

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 - - - -
RegenerationR2 - - - -
RegenerationR3 - - - -
RegenerationR4 - - - -
RegenerationR5 - - - -
RegenerationR6 - - - -
RegenerationBL - - - -
RegenerationTP - - - -


Genes with expression patterns similar to MligTC455_39814

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_39814 17 0.35 Mlig455_051814

Neo: -

Age: -

1 - - - 1.000 - - Mlig455_051814 {REF} {Length: 1986} {NoTransDecoderORF} {RNA1310_67241} {RNA815_26250.1}
2. MligTC455_10200 114 2.38 Mlig455_060035

Neo: -

Age: -

0.99 - - - 0.990 - - Mlig455_060035 {REF} {Length: 4892} {RNA1509_29378, RNA1509_41981} {RNA1310_4852.2, RNA1509_41981} {RNA1509_41981, RNA815_14079}
3. MligTC455_51087 29 0.6 Mlig455_057838

Neo: -

Age: -

0.974 - - - 0.974 - - Mlig455_057838 {REF} {Length: 1771} {Pfam: Transcriptional regulator [PF01709.22, score=117.4]} {Celegans: WBGene00021757, taco-1, Translational Activator of Cytochrome c Oxidase, [RH, Score=78.2, Expect=1e-16]} {Smed: dd_Smed_v6_2722_0_1, dd_Smed_v6_2722_0_1, [RH, Score=118, Expect=2e-31]} {RNA1509_54641} {RNA1310_11469} {RNA815_7775}
4. MligTC455_25029 26 0.54 Mlig455_061269

Neo: -

Age: -

RFC3 0.97 - - - 0.970 - - Mlig455_061269 {REF} {Length: 2494} {TRANSSPLICED} {Pfam: DNA polymerase III, delta subunit [PF13177.8, score=42.0]; ATPase family associated with various cellular activities (AAA) [PF00004.31, score=36.2]; Rad17 P-loop domain [PF03215.17, score=27.0]; AAA ATPase domain [PF13191.8, score=26.1]; DNA polymerase III, delta subunit [PF06144.15, score=25.4]; AAA domain (dynein-related subfamily) [PF07728.16, score=19.6]} {Human: ENSG00000133119, RFC3, replication factor C subunit 3, [RH, Score=493, Expect=7e-176]} {Mouse: ENSMUSG00000033970, Rfc3, replication factor C (activator 1) 3, [RH, Score=499, Expect=4e-178]} {Dmel: FBgn0028700, RfC38, Replication factor C 38kD subunit, [RH, Score=481, Expect=3e-171]} {Celegans: WBGene00004339, rfc-3, RFC (DNA replication factor) family, [RH, Score=368, Expect=5e-127]} {Smed: dd_Smed_v6_9695_0_1, dd_Smed_v6_9695_0_1, [RH, Score=447, Expect=4e-158]} {RNA1509_12650} {RNA1310_19461.1} {RNA815_9346}
5. MligTC455_31112 228 4.74 Mlig455_037442

Neo: -

Age: -

0.96 - - - 0.960 - - Mlig455_037442 {REF} {Length: 3877} {Pfam: EGF-like domain [PF07974.15, score=19.0]} {RNA1509_9418} {RNA1310_2624} {RNA815_768.1}
6. MligTC455_12268 21 0.44 Mlig455_020458

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_020458 {REF} {Length: 1693} {Pfam: TATA element modulatory factor 1 DNA binding [PF12329.10, score=20.4]} {RNA1509_10012, RNA1509_37655} {RNA1310_23404.1, RNA1509_10012, RNA1509_37655} {RNA1509_10012, RNA1509_37655, RNA815_8343.1}
7. MligTC455_15365 15 0.3 Mlig455_060332

Neo: -

Age: -

0.959 - - - 0.959 - - Mlig455_060332 {REF} {Length: 978} {RNA1310_84789}
8. MligTC455_43591 20 0.41 Mlig455_035269

Neo: -

Age: -

0.953 - - - 0.953 - - Mlig455_035269 {REF} {Length: 674} {TRANSSPLICED} {Pfam: Rhodanese-like domain [PF00581.22, score=43.9]} {Dmel: FBgn0039145, CG6000, [RH, Score=73.6, Expect=2e-17]} {Smed: dd_Smed_v6_530_0_1, dd_Smed_v6_530_0_1, [RH, Score=48.5, Expect=6e-08]} {RNA1509_8867} {RNA1310_22990.1} {RNA815_11557}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA