Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
---|---|---|---|---|---|---|
MligTC455_31148 | 84 | 1.75 | Mlig455_019493 | Neo: - Age: - |
DHX36 | Mlig455_019493 {REF} {Length: 4372} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=65.9]; Helicase conserved C-terminal domain [PF00271.33, score=58.7]; DEAD/DEAH box helicase [PF00270.31, score=44.1]; AAA domain [PF13604.8, score=19.1]} {Human: ENSG00000174953, DHX36, DEAH-box helicase 36, [RH, Score=492, Expect=2e-157]} {Mouse: ENSMUSG00000027770, Dhx36, DEAH (Asp-Glu-Ala-His) box polypeptide 36, [RH, Score=501, Expect=2e-161]} {Dmel: FBgn0032883, Rhau, RHAU helicase, [RH, Score=480, Expect=5e-154]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=303, Expect=2e-86]} {Smed: dd_Smed_v6_4815_0_2, dd_Smed_v6_4815_0_2, [Score=350, Expect=2e-102]} {RNA1509_37650} {RNA1310_2472.1} {RNA815_1474} |
Region | logFC | logCPM | Pvalue | FDR | Specificity |
---|---|---|---|---|---|
RegionR1 | -4.277 | 1.998 | 0.99961 | 1.00000 | |
RegionR2 | 2.092 | 1.998 | 0.11799 | 0.42545 | |
RegionR3 | 1.301 | 1.998 | 0.26023 | 0.80406 | |
RegionR4 | 1.079 | 1.998 | 0.37652 | 0.70053 | |
RegionR5 | 1.78 | 1.998 | 0.07647 | 0.25363 | |
RegionR6 | 0.331 | 1.998 | 0.66845 | 1.00000 | |
RegionR7 | 1.581 | 1.998 | 0.27806 | 0.91009 | |
RegionR8 | -3.888 | 1.998 | 1.00000 | 1.00000 |
Region | logFC | logCPM | PValue | FDR | Specificity |
---|---|---|---|---|---|
RegenerationR1 | 1 | 1.998 | 0.99989 | 1.00000 | |
RegenerationR2 | 0.045 | 1.998 | 0.95518 | 1.00000 | |
RegenerationR3 | 1.276 | 1.998 | 0.11346 | 0.52735 | |
RegenerationR4 | 1.027 | 1.998 | 0.23509 | 0.68364 | |
RegenerationR5 | 0.453 | 1.998 | 0.48849 | 0.85133 | |
RegenerationR6 | 1.941 | 1.998 | 0.03487 | 0.23403 | |
RegenerationBL | 1.115 | 1.998 | 0.55057 | 0.90753 | |
RegenerationTP | 2.211 | 1.998 | 0.32202 | 0.76633 |
Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
1. | MligTC455_31148 | 84 | 1.75 | Mlig455_019493 | Neo: - Age: - |
DHX36 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_019493 {REF} {Length: 4372} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=65.9]; Helicase conserved C-terminal domain [PF00271.33, score=58.7]; DEAD/DEAH box helicase [PF00270.31, score=44.1]; AAA domain [PF13604.8, score=19.1]} {Human: ENSG00000174953, DHX36, DEAH-box helicase 36, [RH, Score=492, Expect=2e-157]} {Mouse: ENSMUSG00000027770, Dhx36, DEAH (Asp-Glu-Ala-His) box polypeptide 36, [RH, Score=501, Expect=2e-161]} {Dmel: FBgn0032883, Rhau, RHAU helicase, [RH, Score=480, Expect=5e-154]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=303, Expect=2e-86]} {Smed: dd_Smed_v6_4815_0_2, dd_Smed_v6_4815_0_2, [Score=350, Expect=2e-102]} {RNA1509_37650} {RNA1310_2472.1} {RNA815_1474} |
2. | MligTC455_15590 | 55 | 1.14 | Mlig455_054938 | Neo: - Age: Down-Up-Up |
1.797 | 0.967 | - | 0.830 | - | - | - | Mlig455_054938 {REF} {Length: 3537} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=57.1]} {Celegans: WBGene00007064, 2RSSE.1, [RH, Score=129, Expect=4e-33]} {Smed: dd_Smed_v6_6099_0_1, dd_Smed_v6_6099_0_1, [RH, Score=260, Expect=4e-79]} {RNA1509_9501} {RNA1310_8454, RNA1509_9501} {RNA1509_9501, RNA815_6408} | |
3. | MligTC455_27001 | 269 | 5.6 | Mlig455_015615 | Neo: - Age: - |
NAV2 | 1.736 | 0.967 | - | 0.769 | - | - | - | Mlig455_015615 {REF} {Length: 5528} {TRANSSPLICED} {Human: ENSG00000166833, NAV2, neuron navigator 2, [Score=511, Expect=1e-151]} {Mouse: ENSMUSG00000052512, Nav2, neuron navigator 2, [Score=501, Expect=2e-148]; ENSMUSG00000020181, Nav3, neuron navigator 3, [Score=476, Expect=6e-140]} {Dmel: FBgn0263873, sick, sickie, [Score=358, Expect=1e-102]} {Celegans: WBGene00006788, unc-53, Adapter protein unc-53, [Score=140, Expect=3e-33]} {Smed: dd_Smed_v6_7701_0_2, dd_Smed_v6_7701_0_2, [Score=433, Expect=2e-128]} {RNA1509_12417} {RNA1310_596.1} {RNA815_2589} |
4. | MligTC455_45645 | 826 | 17.21 | Mlig455_034656, Mlig455_067611 | Neo: Int S/G2/M Age: - Region-enriched R5: 1.034/0.02138 |
ZNF43, ZNF616 | 1.679 | - | - | - | - | 0.965 | 0.714 | Mlig455_034656 {REF} {Length: 375} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=47.9]; C2H2-type zinc finger [PF13894.8, score=32.5]; Zinc-finger double domain [PF13465.8, score=29.7]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=24.4]; C2H2-type zinc finger [PF13912.8, score=23.5]; Zinc-finger of C2H2 type [PF12874.9, score=20.7]; Drought induced 19 protein (Di19), zinc-binding [PF05605.14, score=19.7]} {Human: ENSG00000204611, ZNF616, zinc finger protein 616, [Score=77.8, Expect=1e-17]; ENSG00000167840, ZNF232, zinc finger protein 232, [Score=75.9, Expect=4e-17]; ENSG00000269067, ZNF728, zinc finger protein 728, [Score=75.1, Expect=8e-17]} {Mouse: ENSMUSG00000020420, Zfp607a, zinc finger protein 607A, [Score=80.5, Expect=8e-19]} {Dmel: FBgn0027339, jim, [Score=69.7, Expect=3e-15]} {Celegans: WBGene00012639, fezf-1, FEZ Family zinc finger protein, [Score=65.5, Expect=3e-14]} {Smed: dd_Smed_v6_10039_0_1, dd_Smed_v6_10039_0_1, [Score=63.5, Expect=2e-13]} {RNA1509_23728} {RNA1310_37967} {RNA815_4812} Mlig455_067611 {REF} {Length: 2566} {TRANSSPLICED} {Pfam: Zinc finger, C2H2 type [PF00096.28, score=107.3]; C2H2-type zinc finger [PF13894.8, score=90.9]; Zinc-finger double domain [PF13465.8, score=54.8]; Zinc-finger double-stranded RNA-binding [PF12171.10, score=32.3]; C2H2-type zinc finger [PF13912.8, score=30.3]; Zinc-finger of C2H2 type [PF12874.9, score=28.7]} {Human: ENSG00000198521, ZNF43, zinc finger protein 43, [Score=166, Expect=2e-43]; ENSG00000204611, ZNF616, zinc finger protein 616, [Score=163, Expect=2e-42]; ENSG00000196350, ZNF729, zinc finger protein 729, [Score=160, Expect=3e-41]; ENSG00000256294, ZNF225, zinc finger protein 225, [Score=158, Expect=4e-41]} {Mouse: ENSMUSG00000096916, Zfp850, zinc finger protein 850, [Score=185, Expect=9e-51]} {Dmel: FBgn0020309, crol, crooked legs, [Score=122, Expect=4e-29]} {Celegans: WBGene00021931, Y55F3AM.14, [Score=86.7, Expect=9e-18]} {Smed: dd_Smed_v6_8871_0_1, dd_Smed_v6_8871_0_1, [Score=84.3, Expect=6e-17]} {RNA1509_12067, RNA1509_15772, RNA1509_23728} {RNA1310_17539, RNA1509_12067, RNA1509_23728} {RNA1509_12067, RNA1509_23728, RNA815_4812} |
5. | MligTC455_41750 | 29 | 0.6 | Mlig455_062460 | Neo: Int S/G2/M Age: - |
SAMD4B | 0.965 | 0.965 | - | - | - | - | - | Mlig455_062460 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=30.4]} {Human: ENSG00000179134, SAMD4B, sterile alpha motif domain containing 4B, [RH, Score=112, Expect=1e-25]} {Mouse: ENSMUSG00000109336, Samd4b, sterile alpha motif domain containing 4B, [Score=109, Expect=1e-24]} {Dmel: FBgn0016070, smg, smaug, [RH, Score=77.8, Expect=1e-14]} {Celegans: WBGene00022538, ZC190.4, [RH, Score=73.9, Expect=1e-13]} {Smed: dd_Smed_v6_6923_0_1, dd_Smed_v6_6923_0_1, [Score=129, Expect=1e-32]} {RNA1509_54805, RNA1509_58502} {RNA1310_14232, RNA1509_58502} {RNA1509_58502, RNA815_10563} |
6. | MligTC455_11124 | 72 | 1.5 | Mlig455_020487 | Neo: - Age: - Region-enriched R4: 8.348/0.00117 |
0.962 | 0.962 | - | - | - | - | - | Mlig455_020487 {REF} {Length: 1498} {RNA1509_26460} {RNA1310_29093.1, RNA1509_26460} {RNA1509_26460, RNA815_24240} | |
7. | MligTC455_49289 | 402 | 8.37 | Mlig455_009864 | Neo: Neoblast, stringent Age: - |
0.96 | - | - | - | - | 0.960 | - | Mlig455_009864 {REF} {Length: 2032} {TRANSSPLICED} {RNA1509_12825, RNA1509_19362, RNA1509_60056} {RNA1310_24631, RNA1509_12825, RNA1509_19362, RNA1509_60056} {RNA1509_12825, RNA1509_19362, RNA1509_60056, RNA815_4319.3} | |
8. | MligTC455_39679 | 92 | 1.92 | Mlig455_044241 | Neo: - Age: - |
0.959 | 0.959 | - | - | - | - | - | Mlig455_044241 {REF} {Length: 2274} {TRANSSPLICED} {RNA1509_4626} {RNA1310_6681} {RNA815_2257} | |
9. | MligTC455_49982 | 212 | 4.41 | Mlig455_022747 | Neo: - Age: Down-Up-Down |
0.959 | 0.959 | - | - | - | - | - | Mlig455_022747 {REF} {Length: 2014} {TRANSSPLICED} {Pfam: Fz domain [PF01392.24, score=24.5]; Stretch-activated Ca2+-permeable channel component [PF12929.9, score=19.5]} {Smed: dd_Smed_v6_11002_0_1, dd_Smed_v6_11002_0_1, [Score=61.6, Expect=2e-11]} {RNA1509_26308} {RNA1310_12484} {RNA815_6287.1} | |
10. | MligTC455_25050 | 20 | 0.41 | Mlig455_041229 | Neo: - Age: - |
RNF31 | 0.957 | - | - | - | 0.957 | - | - | Mlig455_041229 {REF} {Length: 2429} {TRANSSPLICED} {Pfam: IBR domain, a half RING-finger domain [PF01485.23, score=35.2]; E3 Ubiquitin Ligase RBR C-terminal domain [PF18091.3, score=23.5]} {Human: ENSG00000092098, RNF31, ring finger protein 31, [Score=153, Expect=2e-39]; ENSG00000285152, RNF31, ring finger protein 31, [Score=153, Expect=2e-39]; ENSG00000259529, AL136295.5, novel transcript, [Score=152, Expect=6e-40]; ENSG00000284845, AL136295.10, novel transcript, [Score=152, Expect=6e-40]} {Mouse: ENSMUSG00000047098, Rnf31, ring finger protein 31, [Score=150, Expect=1e-38]} {Dmel: FBgn0031857, LUBEL, Linear Ubiquitin E3 ligase, [Score=132, Expect=1e-32]} {Smed: dd_Smed_v6_4074_0_1, dd_Smed_v6_4074_0_1, [Score=103, Expect=2e-23]} {RNA1509_55761} {RNA1310_17723.1} {RNA815_23151} |
11. | MligTC455_45043 | 50 | 1.05 | Mlig455_015382 | Neo: Int S/G2/M Age: - |
FANCI | 0.957 | 0.957 | - | - | - | - | - | Mlig455_015382 {REF} {Length: 5579} {TRANSSPLICED} {Pfam: FANCI solenoid 4 [PF14678.8, score=99.8]; FANCI solenoid 2 [PF14676.8, score=87.0]; FANCI helical domain 2 [PF14680.8, score=79.4]; FANCI solenoid 1 [PF14675.8, score=68.0]; FANCI helical domain 1 [PF14679.8, score=26.8]} {Human: ENSG00000140525, FANCI, FA complementation group I, [RH, Score=169, Expect=8e-42]} {Mouse: ENSMUSG00000039187, Fanci, Fanconi anemia, complementation group I, [RH, Score=190, Expect=3e-48]} {Smed: dd_Smed_v6_8024_0_1, dd_Smed_v6_8024_0_1, [Score=60.1, Expect=1e-08]} {RNA1509_14043, RNA1509_46132} {RNA1310_3141, RNA1509_14043, RNA1509_46132} {RNA1509_14043, RNA1509_46132, RNA815_12076} |
12. | MligTC455_16477 | 427 | 8.9 | Mlig455_042989 | Neo: - Age: Down-Up-Down |
ARF6 | 0.956 | 0.956 | - | - | - | - | - | Mlig455_042989 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=111.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.3]; 6-phosphofructo-2-kinase [PF01591.20, score=18.8]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [Score=148, Expect=7e-46]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [Score=148, Expect=5e-46]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [Score=149, Expect=1e-46]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=142, Expect=7e-44]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [Score=135, Expect=2e-41]} {RNA1509_12815} {RNA1310_25955} {RNA815_11670.2} |
13. | MligTC455_17687 | 82 | 1.71 | Mlig455_001571 | Neo: - Age: - |
0.955 | 0.955 | - | - | - | - | - | Mlig455_001571 {REF} {Length: 2658} {RNA1509_40906} {RNA1310_29293} {RNA815_40335} | |
14. | MligTC455_39891 | 338 | 7.04 | Mlig455_023376, Mlig455_046955 | Neo: - Age: - |
HIRA | 0.953 | - | - | - | - | 0.953 | - | Mlig455_023376 {REF} {Length: 3916} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=92.1]; WD domain, G-beta repeat [PF00400.34, score=63.9]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [Score=449, Expect=3e-140]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=433, Expect=9e-135]} {Dmel: FBgn0022786, Hira, [RH, Score=361, Expect=7e-108]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=216, Expect=5e-58]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=292, Expect=1e-83]} {RNA1509_21457} {RNA1310_15050, RNA1509_21457} {RNA1509_21457, RNA815_26394} Mlig455_046955 {REF} {Length: 3903} {TRANSSPLICED} {Pfam: TUP1-like enhancer of split [PF07569.13, score=95.6]; WD domain, G-beta repeat [PF00400.34, score=64.0]; Anaphase-promoting complex subunit 4 WD40 domain [PF12894.9, score=37.6]; HIRA B motif [PF09453.12, score=18.5]} {Human: ENSG00000100084, HIRA, histone cell cycle regulator, [RH, Score=452, Expect=8e-142]} {Mouse: ENSMUSG00000022702, Hira, histone cell cycle regulator, [Score=434, Expect=8e-135]} {Dmel: FBgn0022786, Hira, [RH, Score=364, Expect=5e-109]} {Celegans: WBGene00019627, K10D2.1, Protein HIRA homolog, [RH, Score=215, Expect=1e-57]} {Smed: dd_Smed_v6_11365_0_1, dd_Smed_v6_11365_0_1, [RH, Score=294, Expect=4e-84]} {RNA1509_21457, RNA1509_58633} {RNA1310_15050, RNA1509_58633} {RNA1509_58633, RNA815_26394} |
15. | MligTC455_40675 | 41 | 0.85 | Mlig455_055266 | Neo: - Age: - |
0.953 | - | - | - | 0.953 | - | - | Mlig455_055266 {REF} {Length: 1110} {NoTransDecoderORF} {RNA1509_48793} {RNA1310_75346} {RNA815_9578.1} | |
16. | MligTC455_49354 | 695 | 14.47 | Mlig455_016777, Mlig455_016794 | Neo: - Age: - |
VPS9D1 | 0.953 | - | - | 0.953 | - | - | - | Mlig455_016777 {REF} {Length: 2754} {TRANSSPLICED} {Pfam: Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=51.6]} {Human: ENSG00000075399, VPS9D1, VPS9 domain containing 1, [RH, Score=50.8, Expect=5e-06]} {Mouse: ENSMUSG00000001062, Vps9d1, VPS9 domain containing 1, [RH, Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_10582_0_1, dd_Smed_v6_10582_0_1, [RH, Score=61.6, Expect=6e-10]} {RNA1509_16292} {RNA1310_16727} {RNA815_17169} Mlig455_016794 {REF} {Length: 2694} {TRANSSPLICED} {Pfam: Vacuolar sorting protein 9 (VPS9) domain [PF02204.20, score=51.6]} {Human: ENSG00000075399, VPS9D1, VPS9 domain containing 1, [RH, Score=50.8, Expect=5e-06]} {Mouse: ENSMUSG00000001062, Vps9d1, VPS9 domain containing 1, [RH, Score=56.2, Expect=8e-08]} {Smed: dd_Smed_v6_10582_0_1, dd_Smed_v6_10582_0_1, [RH, Score=60.1, Expect=2e-09]} {RNA1509_16292} {RNA1310_16727, RNA1509_16292} {RNA1509_16292, RNA815_17169} |
17. | MligTC455_47318 | 207 | 4.32 | Mlig455_025999, Mlig455_040473 | Neo: - Age: - |
0.951 | 0.951 | - | - | - | - | - | Mlig455_025999 {REF} {Length: 993} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45642} {RNA1310_5596.3} {RNA815_32894} Mlig455_040473 {REF} {Length: 966} {TRANSSPLICED} {NoTransDecoderORF} {RNA1509_45642} {RNA1310_5596.3} {RNA815_32894} |
|
18. | MligTC455_28947 | 147 | 3.06 | Mlig455_014683 | Neo: Irradiation Age: Down-Up-Down |
0.95 | 0.950 | - | - | - | - | - | Mlig455_014683 {REF} {Length: 2675} {TRANSSPLICED} {RNA1509_53618} {RNA1310_6731.1} {RNA815_19384} | |
19. | MligTC455_33301 | 346 | 7.2 | Mlig455_013435 | Neo: - Age: - Region-enriched R4: 2.102/0.01016 |
NWD1 | 0.95 | - | - | - | - | 0.950 | - | Mlig455_013435 {REF} {Length: 7733} {TRANSSPLICED} {Pfam: Domain of unknown function (DUF4062) [PF13271.8, score=43.4]; AAA ATPase domain [PF13191.8, score=38.2]; NACHT domain [PF05729.14, score=22.3]} {Human: ENSG00000188039, NWD1, NACHT and WD repeat domain containing 1, [Score=277, Expect=1e-74]} {Mouse: ENSMUSG00000048148, Nwd1, NACHT and WD repeat domain containing 1, [Score=289, Expect=2e-78]} {Dmel: FBgn0038397, CG10185, [Score=344, Expect=1e-95]} {Celegans: WBGene00020254, T05C3.2, [Score=344, Expect=1e-95]} {Smed: dd_Smed_v6_11085_0_1, dd_Smed_v6_11085_0_1, [RH, Score=590, Expect=5e-178]} {RNA1509_43117, RNA1509_6546} {RNA1310_677.1, RNA1509_43117} {RNA1509_43117, RNA815_4957} |
20. | MligTC455_54332 | 77 | 1.61 | Mlig455_067675 | Neo: - Age: Up-Down-Down |
BMP1 | 0.95 | 0.950 | - | - | - | - | - | Mlig455_067675 {REF} {Length: 4231} {Pfam: CUB domain [PF00431.22, score=166.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=79.3, Expect=2e-14]} {Dmel: FBgn0261262, CG42613, [Score=90.1, Expect=4e-18]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=258, Expect=1e-73]} {RNA1509_49729} {RNA1310_14031} {RNA815_23434} |