M. lignano Tomo-Seq
Mlig455 transcriptome Search Regeneration Regions Sections Download

Data search


search
Exact
Search

Results for MligTC455_28947

Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Annotation
MligTC455_28947 147 3.06 Mlig455_014683

Neo: Irradiation

Age: Down-Up-Down

 Mlig455_014683 {REF} {Length: 2675} {TRANSSPLICED} {RNA1509_53618} {RNA1310_6731.1} {RNA815_19384}

Cumulative graph for MligTC455_28947

Region-enriched expression

Region logFC logCPM Pvalue FDR Specificity
RegionR1 -3.937 2.307 0.45830 1.00000
RegionR2 -0.513 2.307 0.96084 1.00000
RegionR3 0.161 2.307 0.80061 1.00000
RegionR4 1.064 2.307 0.30312 0.61634
RegionR5 1.357 2.307 0.09428 0.29350
RegionR6 0.37 2.307 0.69796 1.00000
RegionR7 0.73 2.307 0.58021 1.00000
RegionR8 0.768 2.307 0.63207 1.00000

Regeneration-enriched expression

Region logFC logCPM PValue FDR Specificity
RegenerationR1 5.305 2.307 0.29814 0.99429
RegenerationR2 0.878 2.307 0.21591 0.66308
RegenerationR3 0.584 2.307 0.44043 0.82746
RegenerationR4 0.521 2.307 0.44942 0.84144
RegenerationR5 0.811 2.307 0.15697 0.57825
RegenerationR6 1.326 2.307 0.07044 0.33204
RegenerationBL -0.071 2.307 0.94951 1.00000
RegenerationTP 1.469 2.307 0.13348 0.54923


Genes with expression patterns similar to MligTC455_28947

Nr. Cluster Total UMI counts Global CPM Transcripts Categories Human homolog Σ Spearman correlations Int1 Int2 Int3 Reg1 Reg2 Reg3 Annotation
1. MligTC455_28947 147 3.06 Mlig455_014683

Neo: Irradiation

Age: Down-Up-Down

 6 1.000 1.000 1.000 1.000 1.000 1.000 Mlig455_014683 {REF} {Length: 2675} {TRANSSPLICED} {RNA1509_53618} {RNA1310_6731.1} {RNA815_19384}
2. MligTC455_20024 159 3.31 Mlig455_069868

Neo: Irradiation

Age: -

 NSD2 2.574 0.961 - - 0.885 - 0.728 Mlig455_069868 {REF} {Length: 3452} {Pfam: PWWP domain [PF00855.19, score=106.0]; PHD-finger [PF00628.31, score=32.7]; AWS domain [PF17907.3, score=22.2]; Phorbol esters/diacylglycerol binding domain (C1 domain) [PF00130.24, score=18.4]} {Human: ENSG00000109685, NSD2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=2e-54]} {Mouse: ENSMUSG00000057406, Nsd2, nuclear receptor binding SET domain protein 2, [Score=209, Expect=8e-55]; ENSMUSG00000021488, Nsd1, nuclear receptor-binding SET-domain protein 1, [Score=200, Expect=1e-51]} {Dmel: FBgn0039559, NSD, Nuclear receptor binding SET domain protein, [Score=172, Expect=2e-43]} {Smed: dd_Smed_v6_4755_0_2, dd_Smed_v6_4755_0_2, [Score=186, Expect=6e-49]} {RNA1509_22588} {RNA1310_10794.1} {RNA815_16118}
3. MligTC455_16477 427 8.9 Mlig455_042989

Neo: -

Age: Down-Up-Down

 ARF6 1.86 0.972 - - - - 0.888 Mlig455_042989 {REF} {Length: 1208} {TRANSSPLICED} {Pfam: ADP-ribosylation factor family [PF00025.23, score=111.5]; Signal recognition particle receptor beta subunit [PF09439.12, score=22.3]; 6-phosphofructo-2-kinase [PF01591.20, score=18.8]} {Human: ENSG00000165527, ARF6, ADP ribosylation factor 6, [Score=148, Expect=7e-46]} {Mouse: ENSMUSG00000044147, Arf6, ADP-ribosylation factor 6, [Score=148, Expect=5e-46]} {Dmel: FBgn0013750, Arf51F, ADP ribosylation factor at 51F, [Score=149, Expect=1e-46]} {Celegans: WBGene00000184, arf-6, ADP-Ribosylation Factor related, [Score=142, Expect=7e-44]} {Smed: dd_Smed_v6_2125_0_1, dd_Smed_v6_2125_0_1, [Score=135, Expect=2e-41]} {RNA1509_12815} {RNA1310_25955} {RNA815_11670.2}
4. MligTC455_13555 95 1.97 Mlig455_019079

Neo: Int S/G2/M

Age: -

 COA7 1.845 0.958 - - 0.887 - - Mlig455_019079 {REF} {Length: 1418} {Pfam: Sel1 repeat [PF08238.14, score=23.3]} {Human: ENSG00000162377, COA7, cytochrome c oxidase assembly factor 7 (putative), [Score=48.9, Expect=2e-06]} {Mouse: ENSMUSG00000048351, Coa7, cytochrome c oxidase assembly factor 7, [Score=46.6, Expect=1e-05]} {Dmel: FBgn0039965, CG13865, [RH, Score=66.2, Expect=2e-12]} {RNA1509_45906} {RNA1310_37650.1} {RNA815_47606}
5. MligTC455_32517 153 3.19 Mlig455_064987

Neo: -

Age: Up-Down-Up

 OTUD7B 1.734 0.968 - - 0.766 - - Mlig455_064987 {REF} {Length: 3738} {TRANSSPLICED} {Pfam: OTU-like cysteine protease [PF02338.21, score=67.6]; A20-like zinc finger [PF01754.18, score=22.3]} {Human: ENSG00000264522, OTUD7B, OTU deubiquitinase 7B, [RH, Score=251, Expect=6e-72]} {Mouse: ENSMUSG00000038495, Otud7b, OTU domain containing 7B, [RH, Score=251, Expect=5e-72]; ENSMUSG00000033510, Otud7a, OTU domain containing 7A, [RH, Score=247, Expect=1e-71]} {Dmel: FBgn0037734, trbd, trabid, [Score=125, Expect=3e-29]} {Celegans: WBGene00021733, otub-2, OTUBain deubiquitylating protease homolog, [RH, Score=238, Expect=4e-69]} {Smed: dd_Smed_v6_10637_0_1, dd_Smed_v6_10637_0_1, [Score=246, Expect=3e-73]} {RNA1509_13944} {RNA1310_14040.1} {RNA815_8064}
6. MligTC455_18883 535 11.15 Mlig455_026108, Mlig455_043087

Neo: -

Age: -

Region-enriched R5: 1.224/0.02634

 1.721 0.963 - - - - 0.758

Mlig455_026108 {REF} {Length: 2218} {TRANSSPLICED} {RNA1509_32569} {RNA1310_12856.1} {RNA815_5134.1}

Mlig455_043087 {REF} {Length: 2053} {TRANSSPLICED} {RNA1509_32569, RNA1509_39797} {RNA1310_13286, RNA1509_32569, RNA1509_39797} {RNA1509_32569, RNA1509_39797, RNA815_5134.1}
7. MligTC455_18572 145 3.02 Mlig455_056904

Neo: -

Age: -

 INTS14 1.684 0.959 - - 0.725 - - Mlig455_056904 {REF} {Length: 2480} {TRANSSPLICED} {Pfam: Integrator complex subunit 14 [PF19435.1, score=215.8]; von Willebrand factor type A domain [PF13519.8, score=37.1]} {Human: ENSG00000138614, INTS14, integrator complex subunit 14, [RH, Score=219, Expect=2e-64]} {Mouse: ENSMUSG00000034263, Ints14, integrator complex subunit 14, [RH, Score=220, Expect=4e-65]} {Dmel: FBgn0031314, IntS14, Integrator 14, [RH, Score=147, Expect=5e-38]} {Smed: dd_Smed_v6_10096_0_1, dd_Smed_v6_10096_0_1, [RH, Score=81.6, Expect=2e-16]} {RNA1509_36716} {RNA1310_3852.1, RNA1509_36716} {RNA1509_36716, RNA815_12770}
8. MligTC455_37863 213 4.44 Mlig455_015363

Neo: -

Age: Up-Down-Down

 NBAS 1.659 0.958 - - - - 0.701 Mlig455_015363 {REF} {Length: 8517} {TRANSSPLICED} {Pfam: Secretory pathway protein Sec39 [PF08314.13, score=51.4]; Neuroblastoma-amplified sequence, N terminal [PF15492.8, score=33.5]} {Human: ENSG00000151779, NBAS, neuroblastoma amplified sequence, [RH, Score=384, Expect=1e-106]} {Mouse: ENSMUSG00000020576, Nbas, neuroblastoma amplified sequence, [RH, Score=413, Expect=6e-116]} {Celegans: WBGene00008990, smgl-1, [RH, Score=55.5, Expect=5e-07]} {Smed: dd_Smed_v6_7998_0_1, dd_Smed_v6_7998_0_1, [RH, Score=206, Expect=1e-52]} {RNA1509_11685, RNA1509_55641} {RNA1310_353.1, RNA1509_11685, RNA1509_55641} {RNA1509_11685, RNA1509_55641, RNA815_138}
9. MligTC455_50933 280 5.83 Mlig455_011495

Neo: -

Age: Down-Down-Up

 0.976 0.976 - - - - - Mlig455_011495 {REF} {Length: 3671} {TRANSSPLICED} {RNA1509_11429} {RNA1310_2886.1} {RNA815_8254}
10. MligTC455_39679 92 1.92 Mlig455_044241

Neo: -

Age: -

 0.973 0.973 - - - - - Mlig455_044241 {REF} {Length: 2274} {TRANSSPLICED} {RNA1509_4626} {RNA1310_6681} {RNA815_2257}
11. MligTC455_45043 50 1.05 Mlig455_015382

Neo: Int S/G2/M

Age: -

 FANCI 0.969 0.969 - - - - - Mlig455_015382 {REF} {Length: 5579} {TRANSSPLICED} {Pfam: FANCI solenoid 4 [PF14678.8, score=99.8]; FANCI solenoid 2 [PF14676.8, score=87.0]; FANCI helical domain 2 [PF14680.8, score=79.4]; FANCI solenoid 1 [PF14675.8, score=68.0]; FANCI helical domain 1 [PF14679.8, score=26.8]} {Human: ENSG00000140525, FANCI, FA complementation group I, [RH, Score=169, Expect=8e-42]} {Mouse: ENSMUSG00000039187, Fanci, Fanconi anemia, complementation group I, [RH, Score=190, Expect=3e-48]} {Smed: dd_Smed_v6_8024_0_1, dd_Smed_v6_8024_0_1, [Score=60.1, Expect=1e-08]} {RNA1509_14043, RNA1509_46132} {RNA1310_3141, RNA1509_14043, RNA1509_46132} {RNA1509_14043, RNA1509_46132, RNA815_12076}
12. MligTC455_11719 74 1.55 Mlig455_058097

Neo: -

Age: -

 0.968 - - 0.968 - - - Mlig455_058097 {REF} {Length: 665} {TRANSSPLICED} {RNA1310_55434} {RNA815_29179}
13. MligTC455_39618 251 5.22 Mlig455_052942

Neo: -

Age: -

Region-enriched R4: 3.069/0.01891
Region-enriched R5: 2.396/0.01715

 MPP6 0.967 0.967 - - - - - Mlig455_052942 {REF} {Length: 3174} {TRANSSPLICED} {Pfam: Guanylate kinase [PF00625.23, score=123.6]; Variant SH3 domain [PF07653.19, score=34.8]; SH3 domain [PF00018.30, score=29.1]; PDZ domain [PF00595.26, score=28.2]; L27 domain [PF02828.18, score=24.5]; Variant SH3 domain [PF14604.8, score=22.5]; PDZ domain [PF17820.3, score=21.5]; AAA ATPase domain [PF13191.8, score=20.6]} {Human: ENSG00000105926, MPP6, membrane palmitoylated protein 6, [RH, Score=345, Expect=1e-112]} {Mouse: ENSMUSG00000038388, Mpp6, membrane protein, palmitoylated 6 (MAGUK p55 subfamily member 6), [Score=357, Expect=1e-115]} {Dmel: FBgn0250785, vari, varicose, [RH, Score=323, Expect=3e-102]} {Celegans: WBGene00002991, lin-2, [Score=273, Expect=5e-83]} {Smed: dd_Smed_v6_5287_0_1, dd_Smed_v6_5287_0_1, [RH, Score=416, Expect=4e-138]} {RNA1509_20995} {RNA1310_12223.1} {RNA815_10039}
14. MligTC455_15590 55 1.14 Mlig455_054938

Neo: -

Age: Down-Up-Up

 0.966 0.966 - - - - - Mlig455_054938 {REF} {Length: 3537} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=57.1]} {Celegans: WBGene00007064, 2RSSE.1, [RH, Score=129, Expect=4e-33]} {Smed: dd_Smed_v6_6099_0_1, dd_Smed_v6_6099_0_1, [RH, Score=260, Expect=4e-79]} {RNA1509_9501} {RNA1310_8454, RNA1509_9501} {RNA1509_9501, RNA815_6408}
15. MligTC455_46097 66 1.38 Mlig455_066528

Neo: -

Age: logFC(26M/2M)=0.553

 0.965 0.965 - - - - - Mlig455_066528 {REF} {Length: 1956} {TRANSSPLICED} {Pfam: MORN repeat [PF02493.22, score=28.4]} {RNA1509_5700} {RNA1310_28408} {RNA815_19918}
16. MligTC455_29314 78 1.62 Mlig455_048646

Neo: -

Age: Up-Down-Down

 SLC22A6 0.96 0.960 - - - - - Mlig455_048646 {REF} {Length: 3351} {Pfam: Sugar (and other) transporter [PF00083.26, score=112.6]; Major Facilitator Superfamily [PF07690.18, score=83.9]} {Human: ENSG00000197901, SLC22A6, solute carrier family 22 member 6, [Score=184, Expect=2e-50]} {Mouse: ENSMUSG00000024650, Slc22a6, solute carrier family 22 (organic anion transporter), member 6, [Score=174, Expect=6e-47]; ENSMUSG00000074028, Slc22a13, solute carrier family 22 (organic cation transporter), member 13, [Score=172, Expect=2e-46]; ENSMUSG00000063652, Slc22a21, solute carrier family 22 (organic cation transporter), member 21, [Score=170, Expect=2e-45]} {Dmel: FBgn0019952, Orct, Organic cation transporter, [Score=175, Expect=1e-47]} {Celegans: WBGene00003842, oct-1, Organic cation transporter 1, [Score=140, Expect=4e-35]} {Smed: dd_Smed_v6_1159_0_1, dd_Smed_v6_1159_0_1, [Score=132, Expect=6e-33]} {RNA1509_13135} {RNA1310_6359.1} {RNA815_24636}
17. MligTC455_27001 269 5.6 Mlig455_015615

Neo: -

Age: -

 NAV2 0.959 0.959 - - - - - Mlig455_015615 {REF} {Length: 5528} {TRANSSPLICED} {Human: ENSG00000166833, NAV2, neuron navigator 2, [Score=511, Expect=1e-151]} {Mouse: ENSMUSG00000052512, Nav2, neuron navigator 2, [Score=501, Expect=2e-148]; ENSMUSG00000020181, Nav3, neuron navigator 3, [Score=476, Expect=6e-140]} {Dmel: FBgn0263873, sick, sickie, [Score=358, Expect=1e-102]} {Celegans: WBGene00006788, unc-53, Adapter protein unc-53, [Score=140, Expect=3e-33]} {Smed: dd_Smed_v6_7701_0_2, dd_Smed_v6_7701_0_2, [Score=433, Expect=2e-128]} {RNA1509_12417} {RNA1310_596.1} {RNA815_2589}
18. MligTC455_41750 29 0.6 Mlig455_062460

Neo: Int S/G2/M

Age: -

 SAMD4B 0.959 0.959 - - - - - Mlig455_062460 {REF} {Length: 3236} {TRANSSPLICED} {Pfam: SAM domain (Sterile alpha motif) [PF00536.32, score=30.4]} {Human: ENSG00000179134, SAMD4B, sterile alpha motif domain containing 4B, [RH, Score=112, Expect=1e-25]} {Mouse: ENSMUSG00000109336, Samd4b, sterile alpha motif domain containing 4B, [Score=109, Expect=1e-24]} {Dmel: FBgn0016070, smg, smaug, [RH, Score=77.8, Expect=1e-14]} {Celegans: WBGene00022538, ZC190.4, [RH, Score=73.9, Expect=1e-13]} {Smed: dd_Smed_v6_6923_0_1, dd_Smed_v6_6923_0_1, [Score=129, Expect=1e-32]} {RNA1509_54805, RNA1509_58502} {RNA1310_14232, RNA1509_58502} {RNA1509_58502, RNA815_10563}
19. MligTC455_02553 40 0.83 Mlig455_057382, Mlig455_057405

Neo: -

Age: Up-Down-Up

Region-enriched R2: 4.891/0.03381

 0.958 0.958 - - - - -

Mlig455_057382 {REF} {Length: 445} {NoTransDecoderORF} {RNA1310_52629}

Mlig455_057405 {REF} {Length: 4885} {TRANSSPLICED} {Celegans: WBGene00012980, efhd-1, EF HanD calcium binding protein, [Score=46.2, Expect=8e-06]} {RNA1310_42652} {RNA815_37610}
20. MligTC455_38257 159 3.31 Mlig455_012808, Mlig455_047421, Mlig455_070483

Neo: -

Age: -

 0.958 0.958 - - - - -

Mlig455_012808 {REF} {Length: 4065} {RNA1310_64880}

Mlig455_047421 {REF} {Length: 6870} {RNA1509_15668} {RNA1310_64880} {RNA815_39775}

Mlig455_070483 {REF} {Length: 3618} {RNA1310_64880}
21. MligTC455_49982 212 4.41 Mlig455_022747

Neo: -

Age: Down-Up-Down

 0.957 0.957 - - - - - Mlig455_022747 {REF} {Length: 2014} {TRANSSPLICED} {Pfam: Fz domain [PF01392.24, score=24.5]; Stretch-activated Ca2+-permeable channel component [PF12929.9, score=19.5]} {Smed: dd_Smed_v6_11002_0_1, dd_Smed_v6_11002_0_1, [Score=61.6, Expect=2e-11]} {RNA1509_26308} {RNA1310_12484} {RNA815_6287.1}
22. MligTC455_53784 177 3.69 Mlig455_035442

Neo: -

Age: -

 SDS 0.956 - - - 0.956 - - Mlig455_035442 {REF} {Length: 2708} {TRANSSPLICED} {Pfam: Pyridoxal-phosphate dependent enzyme [PF00291.27, score=234.1]} {Human: ENSG00000135094, SDS, serine dehydratase, [RH, Score=174, Expect=2e-51]; ENSG00000139410, SDSL, serine dehydratase like, [RH, Score=172, Expect=7e-51]} {Mouse: ENSMUSG00000029596, Sdsl, serine dehydratase-like, [RH, Score=207, Expect=2e-64]} {Dmel: FBgn0037684, CG8129, [Score=70.1, Expect=5e-13]} {Celegans: WBGene00011353, T01H8.2, [Score=83.6, Expect=5e-18]} {Smed: dd_Smed_v6_2842_0_1, dd_Smed_v6_2842_0_1, [RH, Score=201, Expect=3e-58]} {RNA1509_50915, RNA1509_59999} {RNA1310_29136, RNA1509_50915, RNA1509_59999} {RNA1509_50915, RNA1509_59999, RNA815_13880}
23. MligTC455_39693 41 0.86 Mlig455_063193

Neo: -

Age: Up-Down-Down

 MTCL1 0.955 0.955 - - - - - Mlig455_063193 {REF} {Length: 6739} {Pfam: Protein SOGA [PF11365.10, score=34.5]; Chromatin assembly factor 1 complex p150 subunit, N-terminal [PF11600.10, score=21.5]; Myosin-like coiled-coil protein [PF09728.11, score=20.0]; Growth-arrest specific micro-tubule binding [PF13851.8, score=19.9]; TPR/MLP1/MLP2-like protein [PF07926.14, score=19.6]; Fez1 [PF06818.17, score=19.3]} {Human: ENSG00000168502, MTCL1, microtubule crosslinking factor 1, [RH, Score=102, Expect=6e-21]; ENSG00000149639, SOGA1, suppressor of glucose, autophagy associated 1, [RH, Score=101, Expect=1e-20]} {Mouse: ENSMUSG00000055485, Soga1, suppressor of glucose, autophagy associated 1, [RH, Score=109, Expect=2e-23]; ENSMUSG00000052105, Mtcl1, microtubule crosslinking factor 1, [RH, Score=108, Expect=7e-23]} {Dmel: FBgn0031869, CG18304, [RH, Score=89.7, Expect=2e-17]} {Celegans: WBGene00044079, tag-241, [Score=143, Expect=5e-34]} {Smed: dd_Smed_v6_2373_0_2, dd_Smed_v6_2373_0_2, [Score=322, Expect=7e-89]} {RNA1509_19671} {RNA1310_1157, RNA1509_19671} {RNA1509_19671, RNA815_16429}
24. MligTC455_14986 48 1.01 Mlig455_003695, Mlig455_003899

Neo: -

Age: -

 0.954 0.954 - - - - -

Mlig455_003695 {REF} {Length: 897} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_85928}

Mlig455_003899 {REF} {Length: 107} {TRANSSPLICED} {NoTransDecoderORF} {RNA1310_85928}
25. MligTC455_27544 39 0.81 Mlig455_032949

Neo: -

Age: -

 TRPM3 0.954 0.954 - - - - - Mlig455_032949 {REF} {Length: 6125} {Pfam: Ankyrin repeats (3 copies) [PF12796.9, score=51.9]; Ankyrin repeats (many copies) [PF13637.8, score=39.2]; Ankyrin repeat [PF13606.8, score=30.5]; Ankyrin repeats (many copies) [PF13857.8, score=27.8]; Ankyrin repeat [PF00023.32, score=26.4]} {Human: ENSG00000083067, TRPM3, transient receptor potential cation channel subfamily M member 3, [Score=75.9, Expect=4e-13]} {Mouse: ENSMUSG00000052387, Trpm3, transient receptor potential cation channel, subfamily M, member 3, [Score=73.2, Expect=2e-12]} {Celegans: WBGene00001651, gon-2, Transient receptor potential channel, [Score=49.7, Expect=1e-05]} {Smed: dd_Smed_v6_26251_0_1, dd_Smed_v6_26251_0_1, [Score=94.7, Expect=1e-19]} {RNA1509_21241} {RNA1310_1739} {RNA815_2547.1}
26. MligTC455_52319 228 4.76 Mlig455_021474, Mlig455_063234, Mlig455_067359

Neo: -

Age: Down-Up-Down

Region-enriched R4: 3.056/0.03841

 0.951 0.951 - - - - -

Mlig455_021474 {REF} {Length: 1135} {RNA1509_6241} {RNA1310_26979} {RNA815_23904}

Mlig455_063234 {REF} {Length: 915} {RNA1509_6241} {RNA1310_26979} {RNA815_23904}

Mlig455_067359 {REF} {Length: 794} {RNA1310_26979} {RNA815_23904}
27. MligTC455_15799 67 1.4 Mlig455_045387

Neo: -

Age: Up-Down-Down

 OXCT1 0.95 0.950 - - - - - Mlig455_045387 {REF} {Length: 1560} {Pfam: Coenzyme A transferase [PF01144.25, score=151.9]} {Human: ENSG00000083720, OXCT1, 3-oxoacid CoA-transferase 1, [Score=305, Expect=8e-104]; ENSG00000198754, OXCT2, 3-oxoacid CoA-transferase 2, [Score=294, Expect=3e-97]} {Mouse: ENSMUSG00000022186, Oxct1, 3-oxoacid CoA transferase 1, [Score=300, Expect=6e-100]; ENSMUSG00000076438, Oxct2b, 3-oxoacid CoA transferase 2B, [Score=285, Expect=5e-94]; ENSMUSG00000076436, Oxct2a, 3-oxoacid CoA transferase 2A, [Score=285, Expect=5e-94]} {Dmel: FBgn0035298, SCOT, Succinyl-CoA:3-ketoacid CoA transferase, [Score=331, Expect=5e-113]} {Celegans: WBGene00007330, C05C10.3, Probable succinyl-CoA:3-ketoacid coenzyme A transferase, mitochondrial, [Score=271, Expect=8e-89]} {Smed: dd_Smed_v6_1189_0_3, dd_Smed_v6_1189_0_3, [RH, Score=303, Expect=6e-105]} {RNA1509_14646} {RNA1310_12340} {RNA815_6148.1}
28. MligTC455_21500 120 2.49 Mlig455_002512

Neo: -

Age: -

 MTMR9 0.95 0.950 - - - - - Mlig455_002512 {REF} {Length: 2934} {TRANSSPLICED} {Pfam: Myotubularin-like phosphatase domain [PF06602.16, score=203.7]} {Human: ENSG00000104643, MTMR9, myotubularin related protein 9, [Score=233, Expect=1e-68]} {Mouse: ENSMUSG00000035078, Mtmr9, myotubularin related protein 9, [Score=235, Expect=1e-69]} {Dmel: FBgn0035945, CG5026, [Score=179, Expect=2e-48]} {Celegans: WBGene00003479, mtm-9, Myotubularin-related protein 9, [Score=171, Expect=3e-46]} {Smed: dd_Smed_v6_5322_0_1, dd_Smed_v6_5322_0_1, [Score=140, Expect=2e-35]} {RNA1509_13620} {RNA1310_11099} {RNA815_7719}
29. MligTC455_31148 84 1.75 Mlig455_019493

Neo: -

Age: -

 DHX36 0.95 0.950 - - - - - Mlig455_019493 {REF} {Length: 4372} {TRANSSPLICED} {Pfam: Helicase associated domain (HA2) [PF04408.25, score=65.9]; Helicase conserved C-terminal domain [PF00271.33, score=58.7]; DEAD/DEAH box helicase [PF00270.31, score=44.1]; AAA domain [PF13604.8, score=19.1]} {Human: ENSG00000174953, DHX36, DEAH-box helicase 36, [RH, Score=492, Expect=2e-157]} {Mouse: ENSMUSG00000027770, Dhx36, DEAH (Asp-Glu-Ala-His) box polypeptide 36, [RH, Score=501, Expect=2e-161]} {Dmel: FBgn0032883, Rhau, RHAU helicase, [RH, Score=480, Expect=5e-154]} {Celegans: WBGene00004355, rha-1, Probable ATP-dependent RNA helicase A, [Score=303, Expect=2e-86]} {Smed: dd_Smed_v6_4815_0_2, dd_Smed_v6_4815_0_2, [Score=350, Expect=2e-102]} {RNA1509_37650} {RNA1310_2472.1} {RNA815_1474}
30. MligTC455_54332 77 1.61 Mlig455_067675

Neo: -

Age: Up-Down-Down

 BMP1 0.95 0.950 - - - - - Mlig455_067675 {REF} {Length: 4231} {Pfam: CUB domain [PF00431.22, score=166.3]} {Human: ENSG00000168487, BMP1, bone morphogenetic protein 1, [Score=75.5, Expect=3e-13]} {Mouse: ENSMUSG00000022098, Bmp1, bone morphogenetic protein 1, [Score=79.3, Expect=2e-14]} {Dmel: FBgn0261262, CG42613, [Score=90.1, Expect=4e-18]} {Celegans: WBGene00004944, sol-1, Suppressor of lurcher protein 1, [RH, Score=75.5, Expect=9e-14]} {Smed: dd_Smed_v6_19493_0_1, dd_Smed_v6_19493_0_1, [Score=258, Expect=1e-73]} {RNA1509_49729} {RNA1310_14031} {RNA815_23434}

Refine r cutoff to:    Show

Berezikov Lab - 2020-2021 © ERIBA