Data search
Results for MligTC455_31156
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31156 | 1165 | 24.27 | Mlig455_044137 | Neo: - Age: - Region-enriched R4: 1.380/0.03526 |
RANBP2 | Mlig455_044137 {REF} {Length: 8522} {TRANSSPLICED} {Pfam: RanBP1 domain [PF00638.20, score=354.8]; Tetratricopeptide repeat [PF14559.8, score=24.5]; Tetratricopeptide repeat [PF13432.8, score=21.2]} {Human: ENSG00000153201, RANBP2, RAN binding protein 2, [Score=162, Expect=8e-39]} {Mouse: ENSMUSG00000003226, Ranbp2, RAN binding protein 2, [Score=172, Expect=2e-42]} {Dmel: FBgn0039302, Nup358, Nucleoporin 358kD, [RH, Score=260, Expect=5e-69]} {Celegans: WBGene00003795, npp-9, Nuclear Pore complex Protein, [RH, Score=252, Expect=4e-69]} {Smed: dd_Smed_v6_2979_0_1, dd_Smed_v6_2979_0_1, [RH, Score=144, Expect=4e-37]} {RNA1509_5818} {RNA1310_199.1, RNA1509_5818} {RNA1509_5818, RNA815_4843} |
Cumulative graph for MligTC455_31156
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | 0.283 | 4.899 | 0.78039 | 1.00000 | |
| RegionR2 | -0.755 | 4.899 | 0.15115 | 0.48569 | |
| RegionR3 | 0.186 | 4.899 | 0.64711 | 1.00000 | |
| RegionR4 | 1.38 | 4.899 | 0.00481 | 0.03526 | |
| RegionR5 | 1.037 | 4.899 | 0.00480 | 0.03359 | |
| RegionR6 | 0.421 | 4.899 | 0.29496 | 0.88650 | |
| RegionR7 | -0.267 | 4.899 | 0.60330 | 1.00000 | |
| RegionR8 | -2.284 | 4.899 | 0.00433 | 0.11518 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | -0.016 | 4.899 | 0.98924 | 1.00000 | |
| RegenerationR2 | 0.458 | 4.899 | 0.31774 | 0.75629 | |
| RegenerationR3 | -0.069 | 4.899 | 0.88485 | 1.00000 | |
| RegenerationR4 | -0.432 | 4.899 | 0.38079 | 0.80169 | |
| RegenerationR5 | 0.254 | 4.899 | 0.57845 | 0.89976 | |
| RegenerationR6 | 0.398 | 4.899 | 0.39865 | 0.73639 | |
| RegenerationBL | 1.562 | 4.899 | 0.00222 | 0.03891 | |
| RegenerationTP | 0.042 | 4.899 | 0.95098 | 1.00000 |
Genes with expression patterns similar to MligTC455_31156
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31156 | 1165 | 24.27 | Mlig455_044137 | Neo: - Age: - Region-enriched R4: 1.380/0.03526 |
RANBP2 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_044137 {REF} {Length: 8522} {TRANSSPLICED} {Pfam: RanBP1 domain [PF00638.20, score=354.8]; Tetratricopeptide repeat [PF14559.8, score=24.5]; Tetratricopeptide repeat [PF13432.8, score=21.2]} {Human: ENSG00000153201, RANBP2, RAN binding protein 2, [Score=162, Expect=8e-39]} {Mouse: ENSMUSG00000003226, Ranbp2, RAN binding protein 2, [Score=172, Expect=2e-42]} {Dmel: FBgn0039302, Nup358, Nucleoporin 358kD, [RH, Score=260, Expect=5e-69]} {Celegans: WBGene00003795, npp-9, Nuclear Pore complex Protein, [RH, Score=252, Expect=4e-69]} {Smed: dd_Smed_v6_2979_0_1, dd_Smed_v6_2979_0_1, [RH, Score=144, Expect=4e-37]} {RNA1509_5818} {RNA1310_199.1, RNA1509_5818} {RNA1509_5818, RNA815_4843} |
| 2. | MligTC455_45143 | 671 | 13.99 | Mlig455_006437 | Neo: - Age: - |
ALG2 | 2.669 | 0.893 | 0.813 | - | 0.963 | - | - | Mlig455_006437 {REF} {Length: 3112} {TRANSSPLICED} {Pfam: Glycosyl transferases group 1 [PF00534.22, score=124.8]; Glycosyl transferases group 1 [PF13692.8, score=65.0]; Glycosyltransferase Family 4 [PF13439.8, score=34.5]; Glycosyl transferases group 1 [PF13524.8, score=25.9]; Glycosyl transferase 4-like domain [PF13579.8, score=25.9]} {Human: ENSG00000119523, ALG2, ALG2, alpha-1,3/1,6-mannosyltransferase, [RH, Score=338, Expect=3e-113]} {Mouse: ENSMUSG00000039740, Alg2, asparagine-linked glycosylation 2 (alpha-1,3-mannosyltransferase), [RH, Score=349, Expect=8e-118]} {Dmel: FBgn0035401, CG1291, [RH, Score=327, Expect=8e-109]} {Celegans: WBGene00017282, algn-2, Asparagine Linked Glycosylation (ALG) homolog, Nematode, [RH, Score=307, Expect=9e-102]} {Smed: dd_Smed_v6_6228_0_1, dd_Smed_v6_6228_0_1, [RH, Score=333, Expect=7e-112]} {RNA1509_10072} {RNA1310_20122} {RNA815_8316} |
| 3. | MligTC455_25269 | 560 | 11.66 | Mlig455_000700, Mlig455_000754 | Neo: - Age: - |
CDK13 | 2.543 | 0.839 | - | 0.754 | 0.950 | - | - | Mlig455_000700 {REF} {Length: 2536} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=247.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.9]; Haspin like kinase domain [PF12330.10, score=19.8]; ABC1 atypical kinase-like domain [PF03109.18, score=18.5]} {Human: ENSG00000065883, CDK13, cyclin dependent kinase 13, [RH, Score=480, Expect=2e-154]; ENSG00000167258, CDK12, cyclin dependent kinase 12, [RH, Score=474, Expect=3e-154]} {Mouse: ENSMUSG00000041297, Cdk13, cyclin-dependent kinase 13, [RH, Score=481, Expect=4e-155]; ENSMUSG00000003119, Cdk12, cyclin-dependent kinase 12, [RH, Score=473, Expect=1e-153]} {Dmel: FBgn0037093, Cdk12, Cyclin-dependent kinase 12, [RH, Score=459, Expect=3e-149]} {Celegans: WBGene00007135, cdk-12, Cyclin-dependent kinase 12, [RH, Score=407, Expect=5e-134]} {Smed: dd_Smed_v6_4866_0_1, dd_Smed_v6_4866_0_1, [RH, Score=453, Expect=5e-150]} {RNA1509_12550} {RNA1310_5861.2, RNA1509_12550} {RNA1509_12550, RNA815_7862.1} Mlig455_000754 {REF} {Length: 2545} {TRANSSPLICED} {Pfam: Protein kinase domain [PF00069.27, score=247.2]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=118.9]; Haspin like kinase domain [PF12330.10, score=19.8]; ABC1 atypical kinase-like domain [PF03109.18, score=18.5]} {Human: ENSG00000065883, CDK13, cyclin dependent kinase 13, [RH, Score=480, Expect=2e-154]; ENSG00000167258, CDK12, cyclin dependent kinase 12, [RH, Score=474, Expect=3e-154]} {Mouse: ENSMUSG00000041297, Cdk13, cyclin-dependent kinase 13, [RH, Score=481, Expect=4e-155]; ENSMUSG00000003119, Cdk12, cyclin-dependent kinase 12, [RH, Score=473, Expect=1e-153]} {Dmel: FBgn0037093, Cdk12, Cyclin-dependent kinase 12, [RH, Score=459, Expect=3e-149]} {Celegans: WBGene00007135, cdk-12, Cyclin-dependent kinase 12, [RH, Score=407, Expect=5e-134]} {Smed: dd_Smed_v6_4866_0_1, dd_Smed_v6_4866_0_1, [RH, Score=453, Expect=5e-150]} {RNA1509_12550} {RNA1310_5861.2} {RNA815_7862.1} |
| 4. | MligTC455_50412 | 1176 | 24.51 | Mlig455_009876 | Neo: Neoblast Age: - Region-enriched R4: 1.347/0.00561 |
SUMO3 | 2.442 | - | 0.704 | - | 0.771 | - | 0.967 | Mlig455_009876 {REF} {Length: 896} {TRANSSPLICED} {Pfam: Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=76.8]; Ubiquitin family [PF00240.25, score=39.5]} {Human: ENSG00000184900, SUMO3, small ubiquitin-like modifier 3, [RH, Score=113, Expect=9e-34]; ENSG00000188612, SUMO2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=6e-33]} {Mouse: ENSMUSG00000020265, Sumo3, small ubiquitin-like modifier 3, [RH, Score=115, Expect=1e-34]; ENSMUSG00000020738, Sumo2, small ubiquitin-like modifier 2, [RH, Score=111, Expect=4e-33]} {Dmel: FBgn0264922, smt3, [RH, Score=119, Expect=1e-36]} {Celegans: WBGene00004888, smo-1, Small ubiquitin-related modifier, [RH, Score=93.6, Expect=2e-26]} {Smed: dd_Smed_v6_265_0_1, dd_Smed_v6_265_0_1, [RH, Score=143, Expect=4e-46]} {RNA1509_4113, RNA1509_9891} {RNA1310_38034, RNA1509_4113, RNA1509_9891} {RNA1509_4113, RNA1509_9891, RNA815_5193} |
| 5. | MligTC455_14515 | 252 | 5.25 | Mlig455_061972 | Neo: - |
CCDC6 | 1.818 | - | - | - | 0.972 | - | 0.846 | Mlig455_061972 {REF} {Length: 2316} {TRANSSPLICED} {tRNA: Thr(CGT),pseudo, score=29.6} {Pfam: Uncharacterized conserved protein H4 (DUF2046) [PF09755.11, score=323.4]} {Human: ENSG00000108091, CCDC6, coiled-coil domain containing 6, [Score=255, Expect=7e-81]} {Mouse: ENSMUSG00000048701, Ccdc6, coiled-coil domain containing 6, [Score=259, Expect=1e-82]} {Dmel: FBgn0036685, CG6664, [Score=214, Expect=6e-65]} {Celegans: WBGene00011645, T09B9.4, [RH, Score=92.4, Expect=2e-20]} {Smed: dd_Smed_v6_6765_0_1, dd_Smed_v6_6765_0_1, [Score=216, Expect=2e-66]} {RNA1509_15400, RNA1509_31621} {RNA1310_21441.1, RNA1509_15400, RNA1509_31621} {RNA1509_15400, RNA1509_31621, RNA815_7856.2} |
| 6. | MligTC455_26902 | 17000 | 354.17 | Mlig455_003959 | Neo: Int S/G2/M Age: - |
RPL13 | 1.784 | - | - | - | - | 0.950 | 0.834 | Mlig455_003959 {REF} {Length: 804} {TRANSSPLICED} {Pfam: Ribosomal protein L13e [PF01294.20, score=249.9]} {Human: ENSG00000167526, RPL13, ribosomal protein L13, [RH, Score=217, Expect=2e-71]} {Mouse: ENSMUSG00000000740, Rpl13, ribosomal protein L13, [RH, Score=216, Expect=4e-71]} {Dmel: FBgn0011272, RpL13, Ribosomal protein L13, [RH, Score=216, Expect=3e-71]} {Celegans: WBGene00004425, rpl-13, 60S ribosomal protein L13, [RH, Score=180, Expect=3e-57]} {Smed: dd_Smed_v6_145_0_1, dd_Smed_v6_145_0_1, [RH, Score=192, Expect=3e-62]} {RNA1509_3214, RNA1509_3739, RNA1509_3869} {RNA1310_44525, RNA1509_3214, RNA1509_3739, RNA1509_3869} {RNA1509_3214, RNA1509_3739, RNA1509_3869, RNA815_21701.1} |
| 7. | MligTC455_48807 | 1486 | 30.96 | Mlig455_010538, Mlig455_061797 | Neo: Int S/G2/M Age: - Region-enriched R4: 1.212/0.01232 |
CNOT10 | 1.713 | - | - | 0.745 | - | - | 0.968 | Mlig455_010538 {REF} {Length: 4184} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=35.1]; Tetratricopeptide repeat [PF00515.30, score=26.6]; Tetratricopeptide repeat [PF13181.8, score=26.0]; Tetratricopeptide repeat [PF14559.8, score=23.4]; Tetratricopeptide repeat [PF13424.8, score=22.4]; Tetratricopeptide repeat [PF13374.8, score=21.1]} {Human: ENSG00000182973, CNOT10, CCR4-NOT transcription complex subunit 10, [RH, Score=275, Expect=1e-83]} {Mouse: ENSMUSG00000056167, Cnot10, CCR4-NOT transcription complex, subunit 10, [Score=294, Expect=2e-89]} {Dmel: FBgn0260444, Not10, CCR4-NOT transcription complex subunit 10, [RH, Score=99.0, Expect=2e-21]} {Smed: dd_Smed_v6_7843_0_1, dd_Smed_v6_7843_0_1, [RH, Score=286, Expect=7e-88]} {RNA1509_8416} {RNA1310_7100.1} {RNA815_2833} Mlig455_061797 {REF} {Length: 4630} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=33.8]; Tetratricopeptide repeat [PF13428.8, score=27.6]; Tetratricopeptide repeat [PF13181.8, score=26.8]; Tetratricopeptide repeat [PF00515.30, score=26.5]; Tetratricopeptide repeat [PF14559.8, score=21.2]; Tetratricopeptide repeat [PF13374.8, score=19.4]} {Human: ENSG00000182973, CNOT10, CCR4-NOT transcription complex subunit 10, [RH, Score=323, Expect=5e-99]} {Mouse: ENSMUSG00000056167, Cnot10, CCR4-NOT transcription complex, subunit 10, [RH, Score=331, Expect=4e-102]} {Dmel: FBgn0260444, Not10, CCR4-NOT transcription complex subunit 10, [RH, Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_7843_0_1, dd_Smed_v6_7843_0_1, [RH, Score=286, Expect=1e-86]} {RNA1509_8416} {RNA1310_7100.1, RNA1509_8416} {RNA1509_8416, RNA815_2833} |
| 8. | MligTC455_19490 | 590 | 12.3 | Mlig455_043951 | Neo: Int S/G2/M Age: logFC(26M/2M)=0.425 Region-enriched R5: 1.300/0.00946 |
NELFA | 0.965 | - | - | - | - | - | 0.965 | Mlig455_043951 {REF} {Length: 3184} {Human: ENSG00000185049, NELFA, negative elongation factor complex member A, [RH, Score=86.3, Expect=4e-17]} {Mouse: ENSMUSG00000029111, Nelfa, negative elongation factor complex member A, Whsc2, [RH, Score=90.5, Expect=1e-18]} {Dmel: FBgn0038872, Nelf-A, Negative elongation factor A, [RH, Score=79.0, Expect=1e-14]} {Smed: dd_Smed_v6_8484_0_1, dd_Smed_v6_8484_0_1, [RH, Score=57.0, Expect=3e-08]} {RNA1509_7068} {RNA1310_4803.1} {RNA815_2462} |
| 9. | MligTC455_48808 | 694 | 14.47 | Mlig455_061838 | Neo: - Age: - Region-enriched R4: 1.152/0.03533 |
CNOT10 | 0.964 | - | - | - | - | - | 0.964 | Mlig455_061838 {REF} {Length: 4193} {TRANSSPLICED} {Pfam: Tetratricopeptide repeat [PF07719.19, score=33.7]; Tetratricopeptide repeat [PF13428.8, score=27.5]; Tetratricopeptide repeat [PF13181.8, score=26.8]; Tetratricopeptide repeat [PF00515.30, score=26.5]; Tetratricopeptide repeat [PF14559.8, score=21.6]; Tetratricopeptide repeat [PF13374.8, score=19.4]} {Human: ENSG00000182973, CNOT10, CCR4-NOT transcription complex subunit 10, [RH, Score=323, Expect=5e-99]} {Mouse: ENSMUSG00000056167, Cnot10, CCR4-NOT transcription complex, subunit 10, [RH, Score=330, Expect=8e-102]} {Dmel: FBgn0260444, Not10, CCR4-NOT transcription complex subunit 10, [RH, Score=99.4, Expect=3e-21]} {Smed: dd_Smed_v6_7843_0_1, dd_Smed_v6_7843_0_1, [RH, Score=287, Expect=5e-87]} {RNA1509_8416} {RNA1310_7100.1} {RNA815_2833} |
| 10. | MligTC455_24380 | 501 | 10.44 | Mlig455_009808 | Neo: Irradiation Age: Up-Up-Down Region-enriched R5: 1.188/0.00362 |
0.954 | - | - | - | 0.954 | - | - | Mlig455_009808 {REF} {Length: 3691} {TRANSSPLICED} {Dmel: FBgn0033816, CG4679, [RH, Score=51.6, Expect=2e-06]} {RNA1509_10722} {RNA1310_7610} {RNA815_2392} | |
| 11. | MligTC455_26268 | 55 | 1.15 | Mlig455_048366 | Neo: - Age: - |
CDR1 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_048366 {REF} {Length: 1818} {Pfam: Bacterial transferase hexapeptide (six repeats) [PF00132.26, score=47.8]} {Human: ENSG00000184258, CDR1, cerebellar degeneration related protein 1, [RH, Score=54.3, Expect=2e-08]} {RNA1509_12420} {RNA1310_46323} {RNA815_13104.1} |
| 12. | MligTC455_46232 | 862 | 17.96 | Mlig455_041377 | Neo: - Age: - |
DNAJB12 | 0.954 | - | - | - | 0.954 | - | - | Mlig455_041377 {REF} {Length: 2592} {TRANSSPLICED} {Pfam: DnaJ domain [PF00226.33, score=89.8]; Domain of unknown function (DUF1977) [PF09320.13, score=81.0]} {Human: ENSG00000148719, DNAJB12, DnaJ heat shock protein family (Hsp40) member B12, [RH, Score=279, Expect=7e-91]; ENSG00000164031, DNAJB14, DnaJ heat shock protein family (Hsp40) member B14, [RH, Score=278, Expect=9e-91]} {Mouse: ENSMUSG00000020109, Dnajb12, DnaJ heat shock protein family (Hsp40) member B12, [RH, Score=286, Expect=8e-94]; ENSMUSG00000074212, Dnajb14, DnaJ heat shock protein family (Hsp40) member B14, [RH, Score=280, Expect=2e-91]} {Dmel: FBgn0038195, CG3061, [RH, Score=291, Expect=3e-96]} {Celegans: WBGene00001019, dnj-1, DnaJ homolog subfamily B member 1, [RH, Score=261, Expect=3e-84]} {Smed: dd_Smed_v6_3790_0_1, dd_Smed_v6_3790_0_1, [RH, Score=246, Expect=6e-79]} {RNA1509_30945, RNA1509_31998, RNA1509_9746} {RNA1310_22974, RNA1509_30945, RNA1509_31998, RNA1509_9746} {RNA1509_30945, RNA1509_31998, RNA1509_9746, RNA815_10289} |
| 13. | MligTC455_23264 | 2815 | 58.64 | Mlig455_069743 | Neo: - Age: - |
RAD23B | 0.953 | - | - | 0.953 | - | - | - | Mlig455_069743 {REF} {Length: 2990} {Pfam: UBA/TS-N domain [PF00627.33, score=91.6]; Ubiquitin family [PF00240.25, score=69.5]; XPC-binding domain [PF09280.13, score=69.3]; Ubiquitin-2 like Rad60 SUMO-like [PF11976.10, score=23.0]} {Human: ENSG00000119318, RAD23B, RAD23 homolog B, nucleotide excision repair protein, [RH, Score=250, Expect=2e-79]; ENSG00000179262, RAD23A, RAD23 homolog A, nucleotide excision repair protein, [RH, Score=243, Expect=2e-77]} {Mouse: ENSMUSG00000003813, Rad23a, RAD23 homolog A, nucleotide excision repair protein, [RH, Score=248, Expect=2e-79]; ENSMUSG00000028426, Rad23b, RAD23 homolog B, nucleotide excision repair protein, [RH, Score=239, Expect=1e-75]} {Dmel: FBgn0026777, Rad23, [RH, Score=200, Expect=2e-60]} {Celegans: WBGene00013924, rad-23, [RH, Score=157, Expect=6e-45]} {Smed: dd_Smed_v6_3017_0_1, dd_Smed_v6_3017_0_1, [RH, Score=258, Expect=7e-84]} {RNA1509_11759, RNA1509_2540, RNA1509_28784} {RNA1310_10730.1, RNA1509_11759, RNA1509_2540, RNA1509_28784} {RNA1509_11759, RNA1509_2540, RNA1509_28784, RNA815_3907.1} |
| 14. | MligTC455_49494 | 979 | 20.4 | Mlig455_055852 | Neo: - Age: - |
COX17 | 0.951 | - | - | - | 0.951 | - | - | Mlig455_055852 {REF} {Length: 1528} {TRANSSPLICED} {Pfam: Cytochrome C oxidase copper chaperone (COX17) [PF05051.15, score=73.9]} {Human: ENSG00000138495, COX17, cytochrome c oxidase copper chaperone COX17, [RH, Score=70.5, Expect=1e-17]} {Mouse: ENSMUSG00000095464, Gm21987, predicted gene 21987, [RH, Score=68.9, Expect=4e-17]; ENSMUSG00000046516, Cox17, cytochrome c oxidase assembly protein 17, copper chaperone, [RH, Score=68.9, Expect=4e-17]} {Dmel: FBgn0030610, CG9065, [RH, Score=63.5, Expect=7e-15]} {Celegans: WBGene00018240, cox-17, Cytochrome OXidase assembly protein, [RH, Score=67.4, Expect=9e-17]} {Smed: dd_Smed_v6_732_0_1, dd_Smed_v6_732_0_1, [RH, Score=66.2, Expect=3e-16]} {RNA1509_10350, RNA1509_25578, RNA1509_30623} {RNA1310_17427, RNA1509_10350, RNA1509_25578, RNA1509_30623} {RNA1509_10350, RNA1509_25578, RNA1509_30623, RNA815_14491} |
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