TomoSeq data search

Data search

Results for MligTC455_31186

Cluster

Total UMI counts

Global CPM

Transcripts

Categories

Human homolog

Annotation

MligTC455_31186

30

0.63

Mlig455_048865

Neo: -

Age: -

Region-enriched R4: 2.983/0.02501

Mlig455_048865 {REF} {Length: 4543} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=115.5]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.3]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=63.5, Expect=1e-11]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}

Cumulative graph for MligTC455_31186

Region-enriched expression

Region	logFC	logCPM	Pvalue	FDR	Specificity
RegionR1	-3.2	0.854	0.99950	1.00000
RegionR2	1.481	0.854	0.16943	0.51479
RegionR3	0.303	0.854	0.99972	1.00000
RegionR4	2.983	0.854	0.00309	0.02501
RegionR5	1.332	0.854	0.99992	1.00000
RegionR6	-0.346	0.854	0.99978	1.00000
RegionR7	-1.129	0.854	0.99976	1.00000
RegionR8	-1.425	0.854	0.99956	1.00000

Regeneration-enriched expression

Region	logFC	logCPM	PValue	FDR	Specificity
RegenerationR1	0.029	0.854	1.00000	1.00000
RegenerationR2	0.326	0.854	0.47499	0.86038
RegenerationR3	0.576	0.854	0.10825	0.51949
RegenerationR4	0.412	0.854	0.35202	0.78181
RegenerationR5	0.416	0.854	0.22655	0.66059
RegenerationR6	2.892	0.854	0.03914	0.24735
RegenerationBL	-0.476	0.854	0.69455	1.00000
RegenerationTP	-0.498	0.854	0.99994	1.00000

Genes with expression patterns similar to MligTC455_31186

Nr.	Cluster	Total UMI counts	Global CPM	Transcripts	Categories	Human homolog	Σ Spearman correlations	Int1	Int2	Int3	Reg1	Reg2	Reg3	Annotation
1.	MligTC455_31186	30	0.63	Mlig455_048865	Neo: - Age: - Region-enriched R4: 2.983/0.02501		2	-	-	-	1.000	1.000	-	Mlig455_048865 {REF} {Length: 4543} {TRANSSPLICED} {Pfam: Reverse transcriptase (RNA-dependent DNA polymerase) [PF00078.29, score=115.5]; Endonuclease/Exonuclease/phosphatase family [PF03372.25, score=19.3]} {Smed: dd_Smed_v6_26484_0_6, dd_Smed_v6_26484_0_6, [Score=63.5, Expect=1e-11]} {RNA1509_47056} {RNA1310_5710.1} {RNA815_6291.1}
2.	MligTC455_22718	54	1.12	Mlig455_052140	Neo: - Age: -		0.98	-	-	-	-	0.980	-	Mlig455_052140 {REF} {Length: 703} {RNA1509_54930} {RNA1310_105091} {RNA815_37586}
3.	MligTC455_26008	53	1.1	Mlig455_023495	Neo: - Age: logFC(26M/2M)=2.853	GTF2B	0.978	-	-	-	-	0.978	-	Mlig455_023495 {REF} {Length: 2399} {TRANSSPLICED} {Pfam: Transcription factor TFIIB repeat [PF00382.21, score=74.4]; F5/8 type C domain [PF00754.27, score=22.7]} {Human: ENSG00000137947, GTF2B, general transcription factor IIB, [Score=127, Expect=1e-33]} {Mouse: ENSMUSG00000028271, Gtf2b, general transcription factor IIB, [Score=127, Expect=7e-34]} {Dmel: FBgn0004915, TfIIB, Transcription factor IIB, [Score=134, Expect=2e-36]} {Celegans: WBGene00006648, ttb-1, Transcription initiation factor IIB, [Score=117, Expect=2e-30]} {Smed: dd_Smed_v6_2474_0_1, dd_Smed_v6_2474_0_1, [Score=99.4, Expect=8e-24]} {RNA1509_32364} {RNA1310_8246} {RNA815_13955}
4.	MligTC455_19664	141	2.94	Mlig455_056614	Neo: - Age: - Region-enriched R2: 5.722/0.03687 Region-enriched R6: 4.975/0.01610		0.962	-	-	-	-	0.962	-	Mlig455_056614 {REF} {Length: 1585} {Pfam: Lectin C-type domain [PF00059.23, score=68.8]} {Mouse: ENSMUSG00000014542, Clec4f, C-type lectin domain family 4, member f, [Score=53.9, Expect=3e-08]} {Dmel: FBgn0035199, tfc, triforce, [RH, Score=64.3, Expect=1e-12]} {Celegans: WBGene00022858, ZK1193.2, [Score=57.4, Expect=2e-09]} {RNA1310_27721} {RNA815_13332}
5.	MligTC455_33849	62	1.29	Mlig455_006861	Neo: - Age: -	GRIK5	0.962	-	-	-	-	0.962	-	Mlig455_006861 {REF} {Length: 2491} {Pfam: Bacterial extracellular solute-binding proteins, family 3 [PF00497.22, score=25.5]} {Human: ENSG00000105737, GRIK5, glutamate ionotropic receptor kainate type subunit 5, [Score=78.2, Expect=8e-16]; ENSG00000149403, GRIK4, glutamate ionotropic receptor kainate type subunit 4, [Score=77.8, Expect=1e-15]} {Mouse: ENSMUSG00000032017, Grik4, glutamate receptor, ionotropic, kainate 4, [Score=78.6, Expect=5e-16]; ENSMUSG00000003378, Grik5, glutamate receptor, ionotropic, kainate 5 (gamma 2), [Score=78.6, Expect=5e-16]} {Dmel: FBgn0031634, Ir25a, Ionotropic receptor 25a, [Score=79.7, Expect=1e-16]} {Celegans: WBGene00001615, glr-4, GLutamate Receptor family (AMPA), [Score=82.8, Expect=1e-17]} {Smed: dd_Smed_v6_16476_0_1, dd_Smed_v6_16476_0_1, [Score=143, Expect=1e-38]} {RNA1310_42312} {RNA815_56269}
6.	MligTC455_42972	48	0.99	Mlig455_016466	Neo: - Age: Up-Up-Down		0.962	-	-	-	-	0.962	-	Mlig455_016466 {REF} {Length: 3396} {Pfam: Innexin [PF00876.20, score=339.8]} {Dmel: FBgn0027108, Inx2, Innexin 2, [Score=104, Expect=9e-25]} {Celegans: WBGene00006749, unc-9, Innexin unc-9, [Score=278, Expect=2e-90]} {Smed: dd_Smed_v6_10567_0_1, dd_Smed_v6_10567_0_1, [RH, Score=510, Expect=0.0]} {RNA1509_54229} {RNA1310_29188.1, RNA1509_54229} {RNA1509_54229, RNA815_4655}
7.	MligTC455_27040	30	0.63	Mlig455_051257	Neo: Germline Age: -		0.961	-	-	-	-	0.961	-	Mlig455_051257 {REF} {Length: 8360} {TRANSSPLICED} {Pfam: RNase H [PF00075.26, score=57.9]; Endonuclease-reverse transcriptase [PF14529.8, score=39.3]} {RNA1509_32599} {RNA1310_1123.1} {RNA815_252.1}
8.	MligTC455_35592	184	3.84	Mlig455_062155	Neo: - Age: Down-Down-Down, logFC(26M/2M)=-0.656		0.961	-	-	-	-	0.961	-	Mlig455_062155 {REF} {Length: 1849} {RNA1509_33655} {RNA1310_17820.1, RNA1509_33655} {RNA1509_33655, RNA815_11646}
9.	MligTC455_41197	316	6.58	Mlig455_017826	Neo: - Age: -	CAMK4	0.96	-	-	-	-	0.960	-	Mlig455_017826 {REF} {Length: 1398} {Pfam: Protein kinase domain [PF00069.27, score=243.1]; Protein tyrosine and serine/threonine kinase [PF07714.19, score=104.3]; ABC1 atypical kinase-like domain [PF03109.18, score=19.6]} {Human: ENSG00000152495, CAMK4, calcium/calmodulin dependent protein kinase IV, [Score=358, Expect=6e-121]} {Mouse: ENSMUSG00000038128, Camk4, calcium/calmodulin-dependent protein kinase IV, [Score=363, Expect=5e-123]} {Dmel: FBgn0016126, CaMKI, Calcium/calmodulin-dependent protein kinase I, [Score=256, Expect=2e-82]} {Celegans: WBGene00000553, cmk-1, Calcium/calmodulin-dependent protein kinase type 1, [Score=261, Expect=3e-85]} {Smed: dd_Smed_v6_10731_0_1, dd_Smed_v6_10731_0_1, [Score=363, Expect=5e-125]} {RNA1509_46951} {RNA1310_29212.1, RNA1509_46951} {RNA1509_46951, RNA815_16533}
10.	MligTC455_48386	120	2.51	Mlig455_053381	Neo: - Age: logFC(26M/2M)=-0.376	ZC4H2	0.96	-	-	-	-	0.960	-	Mlig455_053381 {REF} {Length: 2396} {Pfam: Zinc finger-containing protein [PF10146.11, score=136.4]; Domain of unknown function (DUF4407) [PF14362.8, score=19.0]} {Human: ENSG00000126970, ZC4H2, zinc finger C4H2-type containing, [Score=74.3, Expect=4e-15]} {Mouse: ENSMUSG00000035062, Zc4h2, zinc finger, C4H2 domain containing, [Score=74.3, Expect=4e-15]} {Dmel: FBgn0030806, CG13001, [Score=64.7, Expect=2e-11]} {Celegans: WBGene00014153, vab-23, [Score=68.6, Expect=4e-13]} {Smed: dd_Smed_v6_6954_0_1, dd_Smed_v6_6954_0_1, [Score=63.9, Expect=2e-11]} {RNA1509_55758} {RNA1310_22786, RNA1509_55758} {RNA1509_55758, RNA815_23222}
11.	MligTC455_23942	80	1.67	Mlig455_002793	Neo: - Age: -		0.958	-	-	-	-	0.958	-	Mlig455_002793 {REF} {Length: 2668} {NoTransDecoderORF} {RNA1509_54874} {RNA1310_102706} {RNA815_8730.1}
12.	MligTC455_29877	16	0.32	Mlig455_006124	Neo: - Age: Up-Down-Up, logFC(26M/2M)=1.090	PKD1L2	0.958	-	-	-	-	0.958	-	Mlig455_006124 {REF} {Length: 14387} {Pfam: F5/8 type C domain [PF00754.27, score=73.3]; Lectin C-type domain [PF00059.23, score=55.5]; PLAT/LH2 domain [PF01477.25, score=32.2]} {Human: ENSG00000166473, PKD1L2, polycystin 1 like 2 (gene/pseudogene), [Score=56.2, Expect=2e-06]; ENSG00000130943, PKDREJ, polycystin family receptor for egg jelly, [Score=55.5, Expect=4e-06]; ENSG00000164176, EDIL3, EGF like repeats and discoidin domains 3, [Score=53.5, Expect=7e-06]} {Mouse: ENSMUSG00000034416, Pkd1l2, polycystic kidney disease 1 like 2, [Score=55.5, Expect=2e-06]; ENSMUSG00000052496, Pkdrej, polycystin (PKD) family receptor for egg jelly, [Score=54.3, Expect=6e-06]; ENSMUSG00000034488, Edil3, EGF-like repeats and discoidin I-like domains 3, [Score=54.3, Expect=3e-06]} {Smed: dd_Smed_v6_13975_0_1, dd_Smed_v6_13975_0_1, [Score=61.2, Expect=2e-08]} {RNA1509_56932} {RNA1310_21089} {RNA815_39770}
13.	MligTC455_19739	25	0.52	Mlig455_035432	Neo: - Age: -		0.952	-	-	-	-	0.952	-	Mlig455_035432 {REF} {Length: 790} {NoTransDecoderORF} {RNA1310_138598}
14.	MligTC455_19740	17	0.35	Mlig455_061084	Neo: - Age: -		0.95	-	-	-	-	0.950	-	Mlig455_061084 {REF} {Length: 1822} {NoTransDecoderORF} {RNA1509_32550} {RNA1310_138598} {RNA815_25146}

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