Data search
Results for MligTC455_31194
| Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Annotation |
|---|---|---|---|---|---|---|
| MligTC455_31194 | 1024 | 21.34 | Mlig455_040769 | Neo: - Age: logFC(26M/2M)=-0.312 |
LIG3 | Mlig455_040769 {REF} {Length: 3163} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=192.3]; DNA ligase N terminus [PF04675.16, score=107.5]; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=73.2]; ATP dependent DNA ligase C terminal region [PF04679.17, score=67.4]; RNA ligase [PF09414.12, score=28.8]; DNA ligase 3 BRCT domain [PF16759.7, score=28.2]; mRNA capping enzyme, catalytic domain [PF01331.21, score=19.5]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [RH, Score=819, Expect=0.0]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [RH, Score=808, Expect=0.0]} {Dmel: FBgn0038035, lig3, DNA ligase III, [RH, Score=572, Expect=0.0]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=178, Expect=2e-46]} {Smed: dd_Smed_v6_7382_0_1, dd_Smed_v6_7382_0_1, [Score=180, Expect=2e-47]} {RNA1509_10062} {RNA1310_5001.1, RNA1509_10062} {RNA1509_10062, RNA815_6784.1} |
Cumulative graph for MligTC455_31194
Region-enriched expression
| Region | logFC | logCPM | Pvalue | FDR | Specificity |
|---|---|---|---|---|---|
| RegionR1 | -0.36 | 4.652 | 0.73579 | 1.00000 | |
| RegionR2 | 0.422 | 4.652 | 0.26793 | 0.65094 | |
| RegionR3 | 0.007 | 4.652 | 0.98189 | 1.00000 | |
| RegionR4 | 0.276 | 4.652 | 0.45836 | 0.78645 | |
| RegionR5 | -0.48 | 4.652 | 0.12071 | 0.34786 | |
| RegionR6 | -0.701 | 4.652 | 0.04842 | 0.41225 | |
| RegionR7 | 0.404 | 4.652 | 0.33289 | 0.96795 | |
| RegionR8 | 0.432 | 4.652 | 0.42099 | 1.00000 |
Regeneration-enriched expression
| Region | logFC | logCPM | PValue | FDR | Specificity |
|---|---|---|---|---|---|
| RegenerationR1 | 0.202 | 4.652 | 0.88330 | 1.00000 | |
| RegenerationR2 | 0.292 | 4.652 | 0.32410 | 0.76203 | |
| RegenerationR3 | 0.232 | 4.652 | 0.49942 | 0.85715 | |
| RegenerationR4 | 0.054 | 4.652 | 0.87871 | 1.00000 | |
| RegenerationR5 | 0.439 | 4.652 | 0.17557 | 0.60455 | |
| RegenerationR6 | 0.84 | 4.652 | 0.02237 | 0.18557 | |
| RegenerationBL | 0.477 | 4.652 | 0.23990 | 0.59325 | |
| RegenerationTP | -0.509 | 4.652 | 0.27884 | 0.72642 |
Genes with expression patterns similar to MligTC455_31194
| Nr. | Cluster | Total UMI counts | Global CPM | Transcripts | Categories | Human homolog | Σ Spearman correlations | Int1 | Int2 | Int3 | Reg1 | Reg2 | Reg3 | Annotation |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1. | MligTC455_31194 | 1024 | 21.34 | Mlig455_040769 | Neo: - Age: logFC(26M/2M)=-0.312 |
LIG3 | 6 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | 1.000 | Mlig455_040769 {REF} {Length: 3163} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=192.3]; DNA ligase N terminus [PF04675.16, score=107.5]; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=73.2]; ATP dependent DNA ligase C terminal region [PF04679.17, score=67.4]; RNA ligase [PF09414.12, score=28.8]; DNA ligase 3 BRCT domain [PF16759.7, score=28.2]; mRNA capping enzyme, catalytic domain [PF01331.21, score=19.5]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [RH, Score=819, Expect=0.0]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [RH, Score=808, Expect=0.0]} {Dmel: FBgn0038035, lig3, DNA ligase III, [RH, Score=572, Expect=0.0]} {Celegans: WBGene00002985, lig-1, DNA ligase 1, [Score=178, Expect=2e-46]} {Smed: dd_Smed_v6_7382_0_1, dd_Smed_v6_7382_0_1, [Score=180, Expect=2e-47]} {RNA1509_10062} {RNA1310_5001.1, RNA1509_10062} {RNA1509_10062, RNA815_6784.1} |
| 2. | MligTC455_31195 | 1021 | 21.28 | Mlig455_064603 | Neo: - Age: Down-Down-Up |
LIG3 | 5.992 | 0.996 | 1.000 | 1.000 | 0.998 | 0.999 | 0.999 | Mlig455_064603 {REF} {Length: 3324} {TRANSSPLICED} {Pfam: ATP dependent DNA ligase domain [PF01068.23, score=194.0]; DNA ligase N terminus [PF04675.16, score=108.9]; Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=73.5]; ATP dependent DNA ligase C terminal region [PF04679.17, score=32.8]; RNA ligase [PF09414.12, score=29.4]; mRNA capping enzyme, catalytic domain [PF01331.21, score=20.0]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [Score=715, Expect=0.0]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [Score=708, Expect=0.0]} {Dmel: FBgn0038035, lig3, DNA ligase III, [Score=488, Expect=6e-163]} {Celegans: WBGene00010626, K07C5.3, [RH, Score=139, Expect=6e-35]} {Smed: dd_Smed_v6_7382_0_1, dd_Smed_v6_7382_0_1, [Score=145, Expect=3e-36]} {RNA1509_10062} {RNA1310_5001.1} {RNA815_6784.1} |
| 3. | MligTC455_31196 | 1109 | 23.1 | Mlig455_066769 | Neo: - |
LIG3 | 5.891 | 0.994 | 0.991 | 0.973 | 0.976 | 0.981 | 0.976 | Mlig455_066769 {REF} {Length: 4467} {TRANSSPLICED} {Pfam: Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region [PF00645.20, score=74.7]; DNA ligase N terminus [PF04675.16, score=38.3]} {Human: ENSG00000005156, LIG3, DNA ligase 3, [Score=196, Expect=5e-58]} {Mouse: ENSMUSG00000020697, Lig3, ligase III, DNA, ATP-dependent, [Score=194, Expect=2e-58]} {Dmel: FBgn0038035, lig3, DNA ligase III, [Score=73.6, Expect=4e-14]} {Celegans: WBGene00010626, K07C5.3, [Score=97.8, Expect=1e-22]} {RNA1509_27005} {RNA1310_5001.2} {RNA815_6784.1} |
| 4. | MligTC455_48953 | 1852 | 38.59 | Mlig455_011173 | Neo: - Age: - |
MPDZ | 1.773 | - | - | - | - | 0.968 | 0.805 | Mlig455_011173 {REF} {Length: 1065} {TRANSSPLICED} {Pfam: PDZ domain [PF00595.26, score=81.8]; PDZ domain [PF17820.3, score=33.1]; PDZ domain [PF13180.8, score=31.8]} {Human: ENSG00000107186, MPDZ, multiple PDZ domain crumbs cell polarity complex component, [Score=78.6, Expect=1e-16]} {Mouse: ENSMUSG00000028402, Mpdz, multiple PDZ domain protein, [Score=82.8, Expect=3e-18]} {Dmel: FBgn0000008, a, arc, [Score=55.8, Expect=5e-09]} {Celegans: WBGene00011890, mics-1, MItoChondrial Scaffolding protei, [Score=46.6, Expect=3e-06]} {Smed: dd_Smed_v6_854_0_4, dd_Smed_v6_854_0_4, [Score=54.7, Expect=8e-09]} {RNA1509_22633} {RNA1310_4528.2, RNA1509_22633} {RNA1509_22633, RNA815_5539} |
| 5. | MligTC455_42511 | 737 | 15.35 | Mlig455_015661 | Neo: - Age: - Region-enriched R2: 1.560/0.00433 |
0.966 | - | - | - | - | - | 0.966 | Mlig455_015661 {REF} {Length: 1363} {TRANSSPLICED} {Pfam: Protein of unknown function (DUF3421) [PF11901.10, score=98.9]} {Dmel: FBgn0033787, CG13321, [Score=76.6, Expect=9e-17]} {Smed: dd_Smed_v6_30758_0_1, dd_Smed_v6_30758_0_1, [Score=105, Expect=7e-29]} {RNA1509_21460, RNA1509_8735} {RNA1310_20408, RNA1509_21460, RNA1509_8735} {RNA1509_21460, RNA1509_8735, RNA815_10936.1} | |
| 6. | MligTC455_37163 | 619 | 12.9 | Mlig455_053482 | Neo: - Age: - |
ARHGAP35 | 0.963 | - | - | - | - | - | 0.963 | Mlig455_053482 {REF} {Length: 7343} {TRANSSPLICED} {Pfam: RhoGAP domain [PF00620.29, score=92.7]; p190RhoGAP, pG1 and pG2 domains [PF19518.1, score=61.4]; p190-A and -B Rho GAPs FF domain [PF16512.7, score=30.3]; Ras family [PF00071.24, score=20.2]} {Human: ENSG00000160007, ARHGAP35, Rho GTPase activating protein 35, [RH, Score=249, Expect=3e-66]} {Mouse: ENSMUSG00000058230, Arhgap35, Rho GTPase activating protein 35, [RH, Score=249, Expect=3e-66]} {Dmel: FBgn0026375, RhoGAPp190, Rho GTPase activating protein p190, [Score=164, Expect=2e-40]} {Celegans: WBGene00010374, rga-5, Rho GTPase Activating protein, [Score=125, Expect=1e-28]} {Smed: dd_Smed_v6_8436_0_1, dd_Smed_v6_8436_0_1, [RH, Score=102, Expect=1e-21]} {RNA1509_25787, RNA1509_31000, RNA1509_35044} {RNA1310_1448.1, RNA1509_25787, RNA1509_35044} {RNA1509_25787, RNA1509_35044, RNA815_7808.1} |
| 7. | MligTC455_49258 | 157 | 3.28 | Mlig455_057506 | Neo: - Age: Down-Up-Down |
0.955 | - | - | - | - | - | 0.955 | Mlig455_057506 {REF} {Length: 3064} {TRANSSPLICED} {RNA1509_26605} {RNA1310_31888} {RNA815_19769} |
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